RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 PEAK1Q9H792 1746 aa12.27□□□□□ -0.45
SPARC-204ENST00000521569 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.45
SPARC-204ENST00000521569 ABCC6O95255 1503 aa12.27□□□□□ -0.45
SPARC-204ENST00000521569 TOM1L2Q6ZVM7 507 aa12.26□□□□□ -0.45
SPARC-204ENST00000521569 MARCH10Q8NA82 808 aaPredicted RBP12.26□□□□□ -0.45
SPARC-204ENST00000521569 SBNO2Q9Y2G9 1366 aa12.26□□□□□ -0.45
SPARC-204ENST00000521569 RGPD3A6NKT7 1758 aaPredicted RBP12.25□□□□□ -0.45
SPARC-204ENST00000521569 RGPD4Q7Z3J3 1758 aa12.25□□□□□ -0.45
SPARC-204ENST00000521569 NUP188Q5SRE5 1749 aa12.24□□□□□ -0.45
SPARC-204ENST00000521569 USP31Q70CQ4 1352 aa12.24□□□□□ -0.45
SPARC-204ENST00000521569 CCDC7Q96M83 1385 aa12.24□□□□□ -0.45
SPARC-204ENST00000521569 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
SPARC-204ENST00000521569 COL18A1P39060 1754 aa12.23□□□□□ -0.45
SPARC-204ENST00000521569 EXOC5O00471 708 aa12.22□□□□□ -0.45
SPARC-204ENST00000521569 YY1P25490 414 aa12.22□□□□□ -0.45
SPARC-204ENST00000521569 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
SPARC-204ENST00000521569 NFAT5O94916 1531 aa12.21□□□□□ -0.45
SPARC-204ENST00000521569 PTGER2P43116 358 aa12.21□□□□□ -0.45
SPARC-204ENST00000521569 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
SPARC-204ENST00000521569 PPP1R1BQ9UD71 204 aaPredicted RBP12.21□□□□□ -0.45
SPARC-204ENST00000521569 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
SPARC-204ENST00000521569 PIK3C2AO00443 1686 aa12.2□□□□□ -0.46
SPARC-204ENST00000521569 LRRC37A3O60309 1634 aa12.2□□□□□ -0.46
SPARC-204ENST00000521569 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
SPARC-204ENST00000521569 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
SPARC-204ENST00000521569 UTRNP46939 3433 aa12.2□□□□□ -0.46
SPARC-204ENST00000521569 KTN1Q86UP2 1357 aaKnown RBP12.19□□□□□ -0.46
SPARC-204ENST00000521569 ERBB3P21860 1342 aa12.19□□□□□ -0.46
SPARC-204ENST00000521569 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
SPARC-204ENST00000521569 TXNRD1Q16881 649 aa12.19□□□□□ -0.46
SPARC-204ENST00000521569 SGIP1Q9BQI5 828 aa12.19□□□□□ -0.46
SPARC-204ENST00000521569 QRICH2Q9H0J4 1663 aa12.18□□□□□ -0.46
SPARC-204ENST00000521569 TNS2Q63HR2 1409 aa12.18□□□□□ -0.46
SPARC-204ENST00000521569 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
SPARC-204ENST00000521569 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
SPARC-204ENST00000521569 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
SPARC-204ENST00000521569 STK32BQ9NY57 414 aa12.17□□□□□ -0.46
SPARC-204ENST00000521569 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
SPARC-204ENST00000521569 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
SPARC-204ENST00000521569 CD163L1Q9NR16 1453 aa12.15□□□□□ -0.46
SPARC-204ENST00000521569 ZBTB7CA1YPR0 619 aa12.15□□□□□ -0.46
SPARC-204ENST00000521569 IL2RBP14784 551 aa12.15□□□□□ -0.46
SPARC-204ENST00000521569 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
SPARC-204ENST00000521569 PDGFDQ9GZP0 370 aaPredicted RBP12.15□□□□□ -0.46
SPARC-204ENST00000521569 SBF2Q86WG5 1849 aa12.15□□□□□ -0.46
SPARC-204ENST00000521569 EDC4Q6P2E9 1401 aaKnown RBP12.14□□□□□ -0.47
SPARC-204ENST00000521569 USP54Q70EL1 1684 aa12.14□□□□□ -0.47
SPARC-204ENST00000521569 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
SPARC-204ENST00000521569 ZBTB7AO95365 584 aa12.13□□□□□ -0.47
SPARC-204ENST00000521569 TERF2IPQ9NYB0 399 aa12.13□□□□□ -0.47
SPARC-204ENST00000521569 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
SPARC-204ENST00000521569 HDGFL2Q7Z4V5 671 aaPredicted RBP12.12□□□□□ -0.47
SPARC-204ENST00000521569 SLC16A10Q8TF71 515 aa12.12□□□□□ -0.47
SPARC-204ENST00000521569 IP6K1Q92551 441 aa12.12□□□□□ -0.47
SPARC-204ENST00000521569 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
SPARC-204ENST00000521569 AKAP12Q02952 1782 aa12.12□□□□□ -0.47
SPARC-204ENST00000521569 NME9Q86XW9 330 aa12.11□□□□□ -0.47
SPARC-204ENST00000521569 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
SPARC-204ENST00000521569 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
SPARC-204ENST00000521569 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
SPARC-204ENST00000521569 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
SPARC-204ENST00000521569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPARC-204ENST00000521569 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
SPARC-204ENST00000521569 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
SPARC-204ENST00000521569 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
SPARC-204ENST00000521569 SOX12O15370 315 aa12.09□□□□□ -0.47
SPARC-204ENST00000521569 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
SPARC-204ENST00000521569 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
SPARC-204ENST00000521569 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
SPARC-204ENST00000521569 ARXQ96QS3 562 aa12.09□□□□□ -0.47
SPARC-204ENST00000521569 LRRC4BQ9NT99 713 aa12.09□□□□□ -0.47
SPARC-204ENST00000521569 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
SPARC-204ENST00000521569 A0A1W2PP64 1363 aa12.08□□□□□ -0.48
SPARC-204ENST00000521569 NHSQ6T4R5 1651 aa12.08□□□□□ -0.48
SPARC-204ENST00000521569 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.48
SPARC-204ENST00000521569 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
SPARC-204ENST00000521569 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
SPARC-204ENST00000521569 TESK2Q96S53 571 aa12.07□□□□□ -0.48
SPARC-204ENST00000521569 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
SPARC-204ENST00000521569 TMC1Q8TDI8 760 aa12.06□□□□□ -0.48
SPARC-204ENST00000521569 RTL1A6NKG5 1358 aa12.05□□□□□ -0.48
SPARC-204ENST00000521569 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
SPARC-204ENST00000521569 HOXC9P31274 260 aa12.04□□□□□ -0.48
SPARC-204ENST00000521569 MYOM1P52179 1685 aa12.03□□□□□ -0.48
SPARC-204ENST00000521569 COG3Q96JB2 828 aa12.03□□□□□ -0.48
SPARC-204ENST00000521569 MAP3K19Q56UN5 1328 aa12.03□□□□□ -0.48
SPARC-204ENST00000521569 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
SPARC-204ENST00000521569 NSD2O96028 1365 aa12.03□□□□□ -0.48
SPARC-204ENST00000521569 RGPD5Q99666 1765 aa12.02□□□□□ -0.48
SPARC-204ENST00000521569 POLD1P28340 1107 aa12.02□□□□□ -0.49
SPARC-204ENST00000521569 ZCRB1Q8TBF4 217 aaKnown RBP12.02□□□□□ -0.49
SPARC-204ENST00000521569 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
SPARC-204ENST00000521569 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
SPARC-204ENST00000521569 GOLGB1Q14789 3259 aaKnown RBP12.01□□□□□ -0.49
SPARC-204ENST00000521569 ST20-MTHFSA0A0A6YYL1 179 aa12.01□□□□□ -0.49
SPARC-204ENST00000521569 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
SPARC-204ENST00000521569 FYB1O15117 783 aa12□□□□□ -0.49
SPARC-204ENST00000521569 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
SPARC-204ENST00000521569 TONSLQ96HA7 1378 aa12□□□□□ -0.49
SPARC-204ENST00000521569 COL24A1Q17RW2 1714 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms