RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 SMPD1P17405 629 aa12.48□□□□□ -0.41
NUDCD1-204ENST00000521439 C4orf48Q5BLP8 95 aa12.47□□□□□ -0.41
NUDCD1-204ENST00000521439 TLL2Q9Y6L7 1015 aa12.47□□□□□ -0.41
NUDCD1-204ENST00000521439 AVPP01185 164 aa12.46□□□□□ -0.41
NUDCD1-204ENST00000521439 LCE2BO14633 110 aa12.45□□□□□ -0.42
NUDCD1-204ENST00000521439 MYT1Q01538 1121 aa12.45□□□□□ -0.42
NUDCD1-204ENST00000521439 OCSTAMPQ9BR26 566 aa12.45□□□□□ -0.42
NUDCD1-204ENST00000521439 WASF2Q9Y6W5 498 aa12.45□□□□□ -0.42
NUDCD1-204ENST00000521439 MAGEB6P1A0A0J9YX57 407 aa12.44□□□□□ -0.42
NUDCD1-204ENST00000521439 ARHGAP9Q9BRR9 750 aa12.44□□□□□ -0.42
NUDCD1-204ENST00000521439 C1QTNF2Q9BXJ5 285 aa12.44□□□□□ -0.42
NUDCD1-204ENST00000521439 PPP1R12CQ9BZL4 782 aa12.43□□□□□ -0.42
NUDCD1-204ENST00000521439 CTC1Q2NKJ3 1217 aa12.42□□□□□ -0.42
NUDCD1-204ENST00000521439 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
NUDCD1-204ENST00000521439 CRIPAKQ8N1N5 446 aa12.42□□□□□ -0.42
NUDCD1-204ENST00000521439 ZNF592Q92610 1267 aa12.42□□□□□ -0.42
NUDCD1-204ENST00000521439 CDK15Q96Q40 435 aa12.42□□□□□ -0.42
NUDCD1-204ENST00000521439 UCN2Q96RP3 112 aa12.42□□□□□ -0.42
NUDCD1-204ENST00000521439 CARD14Q9BXL6 1004 aa12.42□□□□□ -0.42
NUDCD1-204ENST00000521439 MCCD1P59942 119 aaPredicted RBP12.41□□□□□ -0.42
NUDCD1-204ENST00000521439 ZBTB33Q86T24 672 aa12.41□□□□□ -0.42
NUDCD1-204ENST00000521439 ADAM32Q8TC27 787 aa12.41□□□□□ -0.42
NUDCD1-204ENST00000521439 PALM3A6NDB9 673 aaPredicted RBP12.4□□□□□ -0.42
NUDCD1-204ENST00000521439 ADH1CP00326 375 aa12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 SMCPP49901 116 aaPredicted RBP12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 HPS1Q92902 700 aa12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 MAP4K5Q9Y4K4 846 aa12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 PCDHB9Q9Y5E1 797 aa12.39□□□□□ -0.43
NUDCD1-204ENST00000521439 AXIN1O15169 862 aa12.38□□□□□ -0.43
NUDCD1-204ENST00000521439 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
NUDCD1-204ENST00000521439 AAASQ9NRG9 546 aa12.38□□□□□ -0.43
NUDCD1-204ENST00000521439 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
NUDCD1-204ENST00000521439 RFX1P22670 979 aa12.36□□□□□ -0.43
NUDCD1-204ENST00000521439 NNTQ13423 1086 aa12.36□□□□□ -0.43
NUDCD1-204ENST00000521439 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
NUDCD1-204ENST00000521439 SLC10A4Q96EP9 437 aa12.36□□□□□ -0.43
NUDCD1-204ENST00000521439 CDV3Q9UKY7 258 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-204ENST00000521439 ST8SIA5O15466 376 aa12.35□□□□□ -0.43
NUDCD1-204ENST00000521439 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
NUDCD1-204ENST00000521439 NR5A1Q13285 461 aa12.35□□□□□ -0.43
NUDCD1-204ENST00000521439 VASH1Q7L8A9 365 aaPredicted RBP12.35□□□□□ -0.43
NUDCD1-204ENST00000521439 ATP9BO43861 1147 aa12.34□□□□□ -0.43
NUDCD1-204ENST00000521439 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
NUDCD1-204ENST00000521439 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
NUDCD1-204ENST00000521439 PBXIP1Q96AQ6 731 aa12.34□□□□□ -0.43
NUDCD1-204ENST00000521439 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
NUDCD1-204ENST00000521439 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
NUDCD1-204ENST00000521439 GRM5P41594 1212 aa12.32□□□□□ -0.44
NUDCD1-204ENST00000521439 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
NUDCD1-204ENST00000521439 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
NUDCD1-204ENST00000521439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.31□□□□□ -0.44
NUDCD1-204ENST00000521439 FSHRP23945 695 aa12.31□□□□□ -0.44
NUDCD1-204ENST00000521439 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
NUDCD1-204ENST00000521439 PHTF2Q8N3S3 785 aa12.3□□□□□ -0.44
NUDCD1-204ENST00000521439 SKIP12755 728 aa12.29□□□□□ -0.44
NUDCD1-204ENST00000521439 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
NUDCD1-204ENST00000521439 CAPN5O15484 640 aaPredicted RBP12.28□□□□□ -0.44
NUDCD1-204ENST00000521439 NR3C2P08235 984 aa12.28□□□□□ -0.44
NUDCD1-204ENST00000521439 NBPF20Q3BBV1 942 aa12.28□□□□□ -0.44
NUDCD1-204ENST00000521439 WDR4P57081 412 aaKnown RBP12.27□□□□□ -0.45
NUDCD1-204ENST00000521439 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
NUDCD1-204ENST00000521439 CCDC116Q8IYX3 515 aa12.26□□□□□ -0.45
NUDCD1-204ENST00000521439 USP17L5A8MUK1 530 aa12.25□□□□□ -0.45
NUDCD1-204ENST00000521439 TIMP2P16035 220 aa12.25□□□□□ -0.45
NUDCD1-204ENST00000521439 PLEKHM2Q8IWE5 1019 aa12.25□□□□□ -0.45
NUDCD1-204ENST00000521439 KLF16Q9BXK1 252 aaPredicted RBP12.25□□□□□ -0.45
NUDCD1-204ENST00000521439 DACH1Q9UI36 760 aa12.25□□□□□ -0.45
NUDCD1-204ENST00000521439 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
NUDCD1-204ENST00000521439 USP17L3A6NCW0 530 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 USP17L4A6NCW7 530 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 GIGYF1O75420 1035 aaPredicted RBP12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 PDIA4P13667 645 aaKnown RBP12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 USP17L2Q6R6M4 530 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 USP17L1Q7RTZ2 530 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 PLPP7Q8NBV4 271 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 RETREG2Q8NC44 543 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 ATP13A2Q9NQ11 1180 aa12.24□□□□□ -0.45
NUDCD1-204ENST00000521439 LZTS3O60299 673 aaPredicted RBP12.23□□□□□ -0.45
NUDCD1-204ENST00000521439 ZIC2O95409 532 aaPredicted RBP12.23□□□□□ -0.45
NUDCD1-204ENST00000521439 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
NUDCD1-204ENST00000521439 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
NUDCD1-204ENST00000521439 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
NUDCD1-204ENST00000521439 EMILIN1Q9Y6C2 1016 aa12.23□□□□□ -0.45
NUDCD1-204ENST00000521439 DHX9Q08211 1270 aaKnown RBP12.22□□□□□ -0.45
NUDCD1-204ENST00000521439 CDCA8Q53HL2 280 aa12.22□□□□□ -0.45
NUDCD1-204ENST00000521439 KANK4Q5T7N3 995 aaPredicted RBP12.22□□□□□ -0.45
NUDCD1-204ENST00000521439 DEPDC4Q8N2C3 294 aa12.22□□□□□ -0.45
NUDCD1-204ENST00000521439 INTS6LQ5JSJ4 861 aaKnown RBP12.21□□□□□ -0.45
NUDCD1-204ENST00000521439 ITPKCQ96DU7 683 aa12.21□□□□□ -0.45
NUDCD1-204ENST00000521439 ESPNB1AK53 854 aa12.2□□□□□ -0.46
NUDCD1-204ENST00000521439 ATG7O95352 703 aa12.2□□□□□ -0.46
NUDCD1-204ENST00000521439 NCOA4Q13772 614 aa12.2□□□□□ -0.46
NUDCD1-204ENST00000521439 TSGA10IPQ3SY00 556 aa12.2□□□□□ -0.46
NUDCD1-204ENST00000521439 PPP1R26Q5T8A7 1209 aaPredicted RBP12.19□□□□□ -0.46
NUDCD1-204ENST00000521439 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms