RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
PABPC1-217ENST00000521067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.88■■■□□ 2.21
PABPC1-217ENST00000521067 MARCH10Q8NA82 808 aaPredicted RBP28.87■■■□□ 2.21
PABPC1-217ENST00000521067 CD163L1Q9NR16 1453 aa28.86■■■□□ 2.21
PABPC1-217ENST00000521067 CARD10Q9BWT7 1032 aa28.86■■■□□ 2.21
PABPC1-217ENST00000521067 SLC12A5Q9H2X9 1139 aa28.86■■■□□ 2.21
PABPC1-217ENST00000521067 OVOS2A0A0G2JMS6 1433 aa28.86■■■□□ 2.21
PABPC1-217ENST00000521067 OVOS2A0A0J9YW53 1432 aa28.86■■■□□ 2.21
PABPC1-217ENST00000521067 OVOS2Q6IE36 1432 aa28.86■■■□□ 2.21
PABPC1-217ENST00000521067 PEAK1Q9H792 1746 aa28.85■■■□□ 2.21
PABPC1-217ENST00000521067 NFAT5O94916 1531 aa28.84■■■□□ 2.21
PABPC1-217ENST00000521067 C11orf95C9JLR9 678 aaPredicted RBP28.84■■■□□ 2.21
PABPC1-217ENST00000521067 NME9Q86XW9 330 aa28.84■■■□□ 2.21
PABPC1-217ENST00000521067 CSB-PGBD3P0DP91 1061 aa28.83■■■□□ 2.21
PABPC1-217ENST00000521067 TMC1Q8TDI8 760 aa28.83■■■□□ 2.21
PABPC1-217ENST00000521067 USP31Q70CQ4 1352 aa28.83■■■□□ 2.21
PABPC1-217ENST00000521067 NBPF14Q5TI25 921 aa28.82■■■□□ 2.2
PABPC1-217ENST00000521067 LRRC37A3O60309 1634 aa28.82■■■□□ 2.2
PABPC1-217ENST00000521067 RREB1Q92766 1687 aa28.82■■■□□ 2.2
PABPC1-217ENST00000521067 CDCA7Q9BWT1 371 aaPredicted RBP28.81■■■□□ 2.2
PABPC1-217ENST00000521067 TONSLQ96HA7 1378 aa28.8■■■□□ 2.2
PABPC1-217ENST00000521067 BCL11BQ9C0K0 894 aaPredicted RBP28.8■■■□□ 2.2
PABPC1-217ENST00000521067 RGPD5Q99666 1765 aa28.8■■■□□ 2.2
PABPC1-217ENST00000521067 NUP188Q5SRE5 1749 aa28.8■■■□□ 2.2
PABPC1-217ENST00000521067 PLSCR1O15162 318 aa28.79■■■□□ 2.2
PABPC1-217ENST00000521067 PROM2Q8N271 834 aa28.77■■■□□ 2.2
PABPC1-217ENST00000521067 MON2Q7Z3U7 1717 aa28.77■■■□□ 2.2
PABPC1-217ENST00000521067 EXOC5O00471 708 aa28.75■■■□□ 2.19
PABPC1-217ENST00000521067 HDGFL2Q7Z4V5 671 aaPredicted RBP28.75■■■□□ 2.19
PABPC1-217ENST00000521067 BCL9O00512 1426 aa28.75■■■□□ 2.19
PABPC1-217ENST00000521067 TESK2Q96S53 571 aa28.74■■■□□ 2.19
PABPC1-217ENST00000521067 SBF2Q86WG5 1849 aa28.73■■■□□ 2.19
PABPC1-217ENST00000521067 PUS7Q96PZ0 661 aaKnown RBP28.73■■■□□ 2.19
PABPC1-217ENST00000521067 ANO8Q9HCE9 1232 aaPredicted RBP28.73■■■□□ 2.19
PABPC1-217ENST00000521067 A0A1W2PP64 1363 aa28.73■■■□□ 2.19
PABPC1-217ENST00000521067 CCDC7Q96M83 1385 aa28.73■■■□□ 2.19
PABPC1-217ENST00000521067 ERBB3P21860 1342 aa28.71■■■□□ 2.19
PABPC1-217ENST00000521067 ST20-MTHFSA0A0A6YYL1 179 aa28.71■■■□□ 2.19
PABPC1-217ENST00000521067 EDC4Q6P2E9 1401 aaKnown RBP28.7■■■□□ 2.19
PABPC1-217ENST00000521067 TERF2IPQ9NYB0 399 aa28.7■■■□□ 2.18
PABPC1-217ENST00000521067 WNK3Q9BYP7 1800 aa28.7■■■□□ 2.18
PABPC1-217ENST00000521067 ABCC6O95255 1503 aa28.69■■■□□ 2.18
PABPC1-217ENST00000521067 KCNQ2O43526 872 aa28.69■■■□□ 2.18
PABPC1-217ENST00000521067 NLRP2Q9NX02 1062 aa28.69■■■□□ 2.18
PABPC1-217ENST00000521067 ANKRD24Q8TF21 1146 aa28.67■■■□□ 2.18
PABPC1-217ENST00000521067 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
PABPC1-217ENST00000521067 PDGFDQ9GZP0 370 aaPredicted RBP28.66■■■□□ 2.18
PABPC1-217ENST00000521067 SPON1Q9HCB6 807 aa28.65■■■□□ 2.18
PABPC1-217ENST00000521067 TNS2Q63HR2 1409 aa28.64■■■□□ 2.18
PABPC1-217ENST00000521067 IL2RBP14784 551 aa28.63■■■□□ 2.17
PABPC1-217ENST00000521067 TXNRD1Q16881 649 aa28.63■■■□□ 2.17
PABPC1-217ENST00000521067 FBLN1P23142 703 aa28.62■■■□□ 2.17
PABPC1-217ENST00000521067 ACSBG1Q96GR2 724 aa28.62■■■□□ 2.17
PABPC1-217ENST00000521067 RGPD3A6NKT7 1758 aaPredicted RBP28.62■■■□□ 2.17
PABPC1-217ENST00000521067 RGPD4Q7Z3J3 1758 aa28.62■■■□□ 2.17
PABPC1-217ENST00000521067 IP6K1Q92551 441 aa28.61■■■□□ 2.17
PABPC1-217ENST00000521067 LTN1O94822 1766 aa28.58■■■□□ 2.17
PABPC1-217ENST00000521067 TRIM26Q12899 539 aaPredicted RBP28.57■■■□□ 2.16
PABPC1-217ENST00000521067 LTV1Q96GA3 475 aaPredicted RBP28.56■■■□□ 2.16
PABPC1-217ENST00000521067 NINLQ9Y2I6 1382 aa28.55■■■□□ 2.16
PABPC1-217ENST00000521067 PPP1R1BQ9UD71 204 aaPredicted RBP28.55■■■□□ 2.16
PABPC1-217ENST00000521067 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
PABPC1-217ENST00000521067 COG3Q96JB2 828 aa28.54■■■□□ 2.16
PABPC1-217ENST00000521067 ZBTB7AO95365 584 aa28.53■■■□□ 2.16
PABPC1-217ENST00000521067 SLC15A2Q16348 729 aa28.53■■■□□ 2.16
PABPC1-217ENST00000521067 SLC24A1O60721 1099 aa28.52■■■□□ 2.16
PABPC1-217ENST00000521067 STK32BQ9NY57 414 aa28.52■■■□□ 2.16
PABPC1-217ENST00000521067 HOXC9P31274 260 aa28.51■■■□□ 2.15
PABPC1-217ENST00000521067 CASZ1Q86V15 1759 aa28.5■■■□□ 2.15
PABPC1-217ENST00000521067 ANKRD36BQ8N2N9 1353 aa28.5■■■□□ 2.15
PABPC1-217ENST00000521067 PTGER2P43116 358 aa28.49■■■□□ 2.15
PABPC1-217ENST00000521067 ATF5Q9Y2D1 282 aaPredicted RBP28.49■■■□□ 2.15
PABPC1-217ENST00000521067 FYB1O15117 783 aa28.48■■■□□ 2.15
PABPC1-217ENST00000521067 DDX54Q8TDD1 881 aaKnown RBP28.48■■■□□ 2.15
PABPC1-217ENST00000521067 NHSQ6T4R5 1651 aa28.48■■■□□ 2.15
PABPC1-217ENST00000521067 AMPHP49418 695 aa28.47■■■□□ 2.15
PABPC1-217ENST00000521067 TMF1P82094 1093 aa28.47■■■□□ 2.15
PABPC1-217ENST00000521067 USP47Q96K76 1375 aa28.47■■■□□ 2.15
PABPC1-217ENST00000521067 GGNBP2Q9H3C7 697 aa28.46■■■□□ 2.15
PABPC1-217ENST00000521067 LRRC4BQ9NT99 713 aa28.46■■■□□ 2.15
PABPC1-217ENST00000521067 RRS1Q15050 365 aaKnown RBP28.45■■■□□ 2.14
PABPC1-217ENST00000521067 ZNF827Q17R98 1081 aa28.41■■■□□ 2.14
PABPC1-217ENST00000521067 UTRNP46939 3433 aa28.41■■■□□ 2.14
PABPC1-217ENST00000521067 NBPF6Q5VWK0 638 aa28.4■■■□□ 2.14
PABPC1-217ENST00000521067 NBPF4Q96M43 638 aa28.4■■■□□ 2.14
PABPC1-217ENST00000521067 SGIP1Q9BQI5 828 aa28.4■■■□□ 2.14
PABPC1-217ENST00000521067 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.14
PABPC1-217ENST00000521067 BTAF1O14981 1849 aa28.39■■■□□ 2.13
PABPC1-217ENST00000521067 PRIM1P49642 420 aaKnown RBP28.38■■■□□ 2.13
PABPC1-217ENST00000521067 MTFR1LQ9H019 292 aa28.38■■■□□ 2.13
PABPC1-217ENST00000521067 YY1P25490 414 aa28.37■■■□□ 2.13
PABPC1-217ENST00000521067 ZCRB1Q8TBF4 217 aaKnown RBP28.37■■■□□ 2.13
PABPC1-217ENST00000521067 CARD14Q9BXL6 1004 aa28.37■■■□□ 2.13
PABPC1-217ENST00000521067 USHBP1Q8N6Y0 703 aa28.36■■■□□ 2.13
PABPC1-217ENST00000521067 MEGF6O75095 1541 aa28.36■■■□□ 2.13
PABPC1-217ENST00000521067 PAPPAQ13219 1627 aa28.36■■■□□ 2.13
PABPC1-217ENST00000521067 FAM208AQ9UK61 1670 aaKnown RBP28.35■■■□□ 2.13
PABPC1-217ENST00000521067 KCNQ4P56696 695 aa28.35■■■□□ 2.13
PABPC1-217ENST00000521067 HSP90AB2PQ58FF8 381 aa28.35■■■□□ 2.13
PABPC1-217ENST00000521067 RTL1A6NKG5 1358 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms