RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
CLN8-205ENST00000520991 AXIN2Q9Y2T1 843 aa22.31■■□□□ 1.16
CLN8-205ENST00000520991 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
CLN8-205ENST00000520991 PUS7Q96PZ0 661 aaKnown RBP22.31■■□□□ 1.16
CLN8-205ENST00000520991 EDC4Q6P2E9 1401 aaKnown RBP22.3■■□□□ 1.16
CLN8-205ENST00000520991 CSB-PGBD3P0DP91 1061 aa22.3■■□□□ 1.16
CLN8-205ENST00000520991 NME9Q86XW9 330 aa22.3■■□□□ 1.16
CLN8-205ENST00000520991 USP31Q70CQ4 1352 aa22.29■■□□□ 1.16
CLN8-205ENST00000520991 SLC24A1O60721 1099 aa22.29■■□□□ 1.16
CLN8-205ENST00000520991 TESK2Q96S53 571 aa22.29■■□□□ 1.16
CLN8-205ENST00000520991 A0A1W2PP64 1363 aa22.28■■□□□ 1.16
CLN8-205ENST00000520991 APBA3O96018 575 aa22.28■■□□□ 1.16
CLN8-205ENST00000520991 RGPD5Q99666 1765 aa22.27■■□□□ 1.16
CLN8-205ENST00000520991 USP54Q70EL1 1684 aa22.27■■□□□ 1.16
CLN8-205ENST00000520991 NINLQ9Y2I6 1382 aa22.26■■□□□ 1.15
CLN8-205ENST00000520991 ABCC6O95255 1503 aa22.26■■□□□ 1.15
CLN8-205ENST00000520991 LRRC37A3O60309 1634 aa22.26■■□□□ 1.15
CLN8-205ENST00000520991 PSDA5PKW4 1024 aaPredicted RBP22.26■■□□□ 1.15
CLN8-205ENST00000520991 EZH2Q15910 746 aaKnown RBP22.26■■□□□ 1.15
CLN8-205ENST00000520991 DDB1Q16531 1140 aa22.26■■□□□ 1.15
CLN8-205ENST00000520991 C11orf95C9JLR9 678 aaPredicted RBP22.25■■□□□ 1.15
CLN8-205ENST00000520991 OVOS2A0A0G2JMS6 1433 aa22.24■■□□□ 1.15
CLN8-205ENST00000520991 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
CLN8-205ENST00000520991 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
CLN8-205ENST00000520991 WNK3Q9BYP7 1800 aa22.24■■□□□ 1.15
CLN8-205ENST00000520991 CARD10Q9BWT7 1032 aa22.24■■□□□ 1.15
CLN8-205ENST00000520991 USP47Q96K76 1375 aa22.24■■□□□ 1.15
CLN8-205ENST00000520991 CAMKK2Q96RR4 588 aa22.23■■□□□ 1.15
CLN8-205ENST00000520991 CDCA7Q9BWT1 371 aaPredicted RBP22.23■■□□□ 1.15
CLN8-205ENST00000520991 PARD3Q8TEW0 1356 aa22.23■■□□□ 1.15
CLN8-205ENST00000520991 PCGF6Q9BYE7 350 aa22.21■■□□□ 1.15
CLN8-205ENST00000520991 LTN1O94822 1766 aa22.2■■□□□ 1.14
CLN8-205ENST00000520991 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
CLN8-205ENST00000520991 TMF1P82094 1093 aa22.2■■□□□ 1.14
CLN8-205ENST00000520991 PEAK1Q9H792 1746 aa22.19■■□□□ 1.14
CLN8-205ENST00000520991 R3HDM1Q15032 1099 aaKnown RBP22.19■■□□□ 1.14
CLN8-205ENST00000520991 ERBB3P21860 1342 aa22.18■■□□□ 1.14
CLN8-205ENST00000520991 CLSPNQ9HAW4 1339 aa22.17■■□□□ 1.14
CLN8-205ENST00000520991 ANKRD36BQ8N2N9 1353 aa22.16■■□□□ 1.14
CLN8-205ENST00000520991 NLRP2Q9NX02 1062 aa22.16■■□□□ 1.14
CLN8-205ENST00000520991 TIMELESSQ9UNS1 1208 aa22.16■■□□□ 1.14
CLN8-205ENST00000520991 LRP5O75197 1615 aa22.16■■□□□ 1.14
CLN8-205ENST00000520991 RREB1Q92766 1687 aa22.16■■□□□ 1.14
CLN8-205ENST00000520991 EXOC5O00471 708 aa22.15■■□□□ 1.14
CLN8-205ENST00000520991 MARCH10Q8NA82 808 aaPredicted RBP22.15■■□□□ 1.14
CLN8-205ENST00000520991 ANKRD24Q8TF21 1146 aa22.15■■□□□ 1.14
CLN8-205ENST00000520991 COG3Q96JB2 828 aa22.15■■□□□ 1.14
CLN8-205ENST00000520991 CDCA8Q53HL2 280 aa22.13■■□□□ 1.13
CLN8-205ENST00000520991 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
CLN8-205ENST00000520991 NUP188Q5SRE5 1749 aa22.12■■□□□ 1.13
CLN8-205ENST00000520991 TNS2Q63HR2 1409 aa22.12■■□□□ 1.13
CLN8-205ENST00000520991 NBPF14Q5TI25 921 aa22.11■■□□□ 1.13
CLN8-205ENST00000520991 BCL11BQ9C0K0 894 aaPredicted RBP22.11■■□□□ 1.13
CLN8-205ENST00000520991 BCL9O00512 1426 aa22.1■■□□□ 1.13
CLN8-205ENST00000520991 IL2RBP14784 551 aa22.09■■□□□ 1.13
CLN8-205ENST00000520991 IP6K1Q92551 441 aa22.09■■□□□ 1.13
CLN8-205ENST00000520991 RGPD3A6NKT7 1758 aaPredicted RBP22.08■■□□□ 1.12
CLN8-205ENST00000520991 RGPD4Q7Z3J3 1758 aa22.08■■□□□ 1.12
CLN8-205ENST00000520991 PLSCR1O15162 318 aa22.07■■□□□ 1.12
CLN8-205ENST00000520991 AMPHP49418 695 aa22.07■■□□□ 1.12
CLN8-205ENST00000520991 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
CLN8-205ENST00000520991 MAP3K19Q56UN5 1328 aa22.07■■□□□ 1.12
CLN8-205ENST00000520991 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
CLN8-205ENST00000520991 FAM208AQ9UK61 1670 aaKnown RBP22.05■■□□□ 1.12
CLN8-205ENST00000520991 GGNBP2Q9H3C7 697 aa22.05■■□□□ 1.12
CLN8-205ENST00000520991 FYB1O15117 783 aa22.04■■□□□ 1.12
CLN8-205ENST00000520991 FBLN1P23142 703 aa22.04■■□□□ 1.12
CLN8-205ENST00000520991 HOXC9P31274 260 aa22.04■■□□□ 1.12
CLN8-205ENST00000520991 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
CLN8-205ENST00000520991 RTL1A6NKG5 1358 aa22.01■■□□□ 1.11
CLN8-205ENST00000520991 MYOM1P52179 1685 aa22.01■■□□□ 1.11
CLN8-205ENST00000520991 KIF20BQ96Q89 1820 aa22.01■■□□□ 1.11
CLN8-205ENST00000520991 RRS1Q15050 365 aaKnown RBP22.01■■□□□ 1.11
CLN8-205ENST00000520991 NHSQ6T4R5 1651 aa22■■□□□ 1.11
CLN8-205ENST00000520991 KCNQ2O43526 872 aa22■■□□□ 1.11
CLN8-205ENST00000520991 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
CLN8-205ENST00000520991 NSD3Q9BZ95 1437 aa21.98■■□□□ 1.11
CLN8-205ENST00000520991 SMG6Q86US8 1419 aaKnown RBP21.97■■□□□ 1.11
CLN8-205ENST00000520991 ANO8Q9HCE9 1232 aaPredicted RBP21.97■■□□□ 1.11
CLN8-205ENST00000520991 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
CLN8-205ENST00000520991 PROM2Q8N271 834 aa21.96■■□□□ 1.11
CLN8-205ENST00000520991 DDX54Q8TDD1 881 aaKnown RBP21.96■■□□□ 1.11
CLN8-205ENST00000520991 POLR3GLQ9BT43 218 aa21.96■■□□□ 1.11
CLN8-205ENST00000520991 CARD14Q9BXL6 1004 aa21.96■■□□□ 1.11
CLN8-205ENST00000520991 RGPD2P0DJD1 1756 aa21.94■■□□□ 1.1
CLN8-205ENST00000520991 SPON1Q9HCB6 807 aa21.93■■□□□ 1.1
CLN8-205ENST00000520991 EIF4G2P78344 907 aaKnown RBP eCLIP21.92■■□□□ 1.1
CLN8-205ENST00000520991 FLT4P35916 1363 aa21.91■■□□□ 1.1
CLN8-205ENST00000520991 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
CLN8-205ENST00000520991 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
CLN8-205ENST00000520991 BTAF1O14981 1849 aa21.91■■□□□ 1.1
CLN8-205ENST00000520991 MEGF6O75095 1541 aa21.91■■□□□ 1.1
CLN8-205ENST00000520991 INSRP06213 1382 aa21.91■■□□□ 1.1
CLN8-205ENST00000520991 KIF24Q5T7B8 1368 aa21.91■■□□□ 1.1
CLN8-205ENST00000520991 HSP90AB2PQ58FF8 381 aa21.9■■□□□ 1.1
CLN8-205ENST00000520991 NBPF6Q5VWK0 638 aa21.9■■□□□ 1.1
CLN8-205ENST00000520991 NBPF4Q96M43 638 aa21.9■■□□□ 1.1
CLN8-205ENST00000520991 CGNL1Q0VF96 1302 aa21.9■■□□□ 1.1
CLN8-205ENST00000520991 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.1
CLN8-205ENST00000520991 USHBP1Q8N6Y0 703 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms