RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 FRMPD1Q5SYB0 1578 aa8.94□□□□□ -0.98
FAM49B-218ENST00000520887 BRICD5Q6PL45 260 aa8.93□□□□□ -0.98
FAM49B-218ENST00000520887 TRAF7Q6Q0C0 670 aa8.93□□□□□ -0.98
FAM49B-218ENST00000520887 PPARGC1BQ86YN6 1023 aaKnown RBP8.93□□□□□ -0.98
FAM49B-218ENST00000520887 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
FAM49B-218ENST00000520887 RTEL1-TNFRSF6BF6WH68 1400 aa8.93□□□□□ -0.98
FAM49B-218ENST00000520887 TCOF1Q13428 1488 aaKnown RBP8.93□□□□□ -0.98
FAM49B-218ENST00000520887 SHANK2Q9UPX8 1470 aa8.93□□□□□ -0.98
FAM49B-218ENST00000520887 DNMT1P26358 1616 aaKnown RBP8.93□□□□□ -0.98
FAM49B-218ENST00000520887 ADGBQ8N7X0 1667 aa8.93□□□□□ -0.98
FAM49B-218ENST00000520887 CROCC2H7BZ55 1655 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 ATP10AO60312 1499 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 TRAPPC8Q9Y2L5 1435 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 KDM4AO75164 1064 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 CLCN1P35523 988 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 PLA2G2CQ5R387 149 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 AFAP1Q8N556 730 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 FAM160A2Q8N612 972 aaPredicted RBP8.92□□□□□ -0.98
FAM49B-218ENST00000520887 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
FAM49B-218ENST00000520887 INO80Q9ULG1 1556 aaPredicted RBP8.91□□□□□ -0.98
FAM49B-218ENST00000520887 COL17A1Q9UMD9 1497 aaPredicted RBP8.91□□□□□ -0.98
FAM49B-218ENST00000520887 ANKRD30AQ9BXX3 1397 aa8.91□□□□□ -0.98
FAM49B-218ENST00000520887 MAST1Q9Y2H9 1570 aa8.9□□□□□ -0.98
FAM49B-218ENST00000520887 DAPK1P53355 1430 aa8.9□□□□□ -0.98
FAM49B-218ENST00000520887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.9□□□□□ -0.98
FAM49B-218ENST00000520887 ZNF644Q9H582 1327 aaPredicted RBP8.9□□□□□ -0.98
FAM49B-218ENST00000520887 Q3C1V9 767 aa8.9□□□□□ -0.98
FAM49B-218ENST00000520887 ZNF697Q5TEC3 545 aa8.9□□□□□ -0.98
FAM49B-218ENST00000520887 RNF19BQ6ZMZ0 732 aa8.9□□□□□ -0.98
FAM49B-218ENST00000520887 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
FAM49B-218ENST00000520887 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
FAM49B-218ENST00000520887 REREQ9P2R6 1566 aa8.9□□□□□ -0.99
FAM49B-218ENST00000520887 DIP2CQ9Y2E4 1556 aa8.9□□□□□ -0.99
FAM49B-218ENST00000520887 LCE2BO14633 110 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 USP46P62068 366 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 FAM217BQ9NTX9 383 aaPredicted RBP8.89□□□□□ -0.99
FAM49B-218ENST00000520887 FCF1Q9Y324 198 aaKnown RBP8.89□□□□□ -0.99
FAM49B-218ENST00000520887 ABCA6Q8N139 1617 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 PLXNC1O60486 1568 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 ARHGEF12Q9NZN5 1544 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 A2MP01023 1474 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 MBD5Q9P267 1494 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 KIDINS220Q9ULH0 1771 aa8.89□□□□□ -0.99
FAM49B-218ENST00000520887 YEATS2Q9ULM3 1422 aa8.88□□□□□ -0.99
FAM49B-218ENST00000520887 ZMYND10O75800 440 aa8.88□□□□□ -0.99
FAM49B-218ENST00000520887 ITGAEP38570 1179 aa8.88□□□□□ -0.99
FAM49B-218ENST00000520887 ZC3H15Q8WU90 426 aaKnown RBP8.88□□□□□ -0.99
FAM49B-218ENST00000520887 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
FAM49B-218ENST00000520887 DUOX2Q9NRD8 1548 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 PRR20EP86478 221 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 PRR20CP86479 221 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 PRR20DP86480 221 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 PRR20BP86481 221 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 PRR20AP86496 221 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 MSS51Q4VC12 460 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 PRDM9Q9NQV7 894 aa8.87□□□□□ -0.99
FAM49B-218ENST00000520887 AGLP35573 1532 aa8.86□□□□□ -0.99
FAM49B-218ENST00000520887 RPIAP49247 311 aa8.86□□□□□ -0.99
FAM49B-218ENST00000520887 EIF2AK4Q9P2K8 1649 aaKnown RBP8.86□□□□□ -0.99
FAM49B-218ENST00000520887 ERBINQ96RT1 1412 aa8.86□□□□□ -0.99
FAM49B-218ENST00000520887 KANK1Q14678 1352 aa8.86□□□□□ -0.99
FAM49B-218ENST00000520887 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
FAM49B-218ENST00000520887 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
FAM49B-218ENST00000520887 GDF9O60383 454 aa8.85□□□□□ -0.99
FAM49B-218ENST00000520887 CD2BP2O95400 341 aaKnown RBP8.85□□□□□ -0.99
FAM49B-218ENST00000520887 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
FAM49B-218ENST00000520887 HLA-CQ95604 372 aa8.85□□□□□ -0.99
FAM49B-218ENST00000520887 USB1Q9BQ65 265 aaKnown RBP8.85□□□□□ -0.99
FAM49B-218ENST00000520887 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
FAM49B-218ENST00000520887 ABCC5O15440 1437 aa8.85□□□□□ -0.99
FAM49B-218ENST00000520887 CNTLNQ9NXG0 1405 aa8.85□□□□□ -0.99
FAM49B-218ENST00000520887 FAM135AQ9P2D6 1515 aa8.85□□□□□ -0.99
FAM49B-218ENST00000520887 ADGRL2O95490 1459 aa8.84□□□□□ -0.99
FAM49B-218ENST00000520887 FER1L4A9Z1Z3 1794 aa8.84□□□□□ -0.99
FAM49B-218ENST00000520887 HOXA2O43364 376 aa8.84□□□□□ -0.99
FAM49B-218ENST00000520887 MLECQ14165 292 aa8.84□□□□□ -0.99
FAM49B-218ENST00000520887 BCORL1Q5H9F3 1711 aa8.84□□□□□ -0.99
FAM49B-218ENST00000520887 CHIC2Q9UKJ5 165 aa8.84□□□□□ -0.99
FAM49B-218ENST00000520887 ROCK1Q13464 1354 aa8.84□□□□□ -0.99
FAM49B-218ENST00000520887 DHX29Q7Z478 1369 aaKnown RBP8.84□□□□□ -0.99
FAM49B-218ENST00000520887 TNFRSF10AO00220 468 aa8.83□□□□□ -1
FAM49B-218ENST00000520887 KIF3BO15066 747 aa8.83□□□□□ -1
FAM49B-218ENST00000520887 SSTR3P32745 418 aaPredicted RBP8.83□□□□□ -1
FAM49B-218ENST00000520887 RRP7BPQ9NSQ0 103 aa8.83□□□□□ -1
FAM49B-218ENST00000520887 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
FAM49B-218ENST00000520887 MMP16P51512 607 aa8.82□□□□□ -1
FAM49B-218ENST00000520887 FOXC1Q12948 553 aa8.82□□□□□ -1
FAM49B-218ENST00000520887 TTLL12Q14166 644 aaPredicted RBP8.82□□□□□ -1
FAM49B-218ENST00000520887 PKDCCQ504Y2 493 aa8.82□□□□□ -1
FAM49B-218ENST00000520887 GGT6Q6P531 493 aa8.82□□□□□ -1
FAM49B-218ENST00000520887 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
FAM49B-218ENST00000520887 DGAT1O75907 488 aa8.81□□□□□ -1
FAM49B-218ENST00000520887 GUCA2AQ02747 115 aa8.81□□□□□ -1
FAM49B-218ENST00000520887 AMHR2Q16671 573 aa8.81□□□□□ -1
FAM49B-218ENST00000520887 RIMS1Q86UR5 1692 aaKnown RBP8.81□□□□□ -1
FAM49B-218ENST00000520887 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
FAM49B-218ENST00000520887 KDM5DQ9BY66 1539 aa8.8□□□□□ -1
FAM49B-218ENST00000520887 PKD2L1Q9P0L9 805 aa8.8□□□□□ -1
FAM49B-218ENST00000520887 MADDQ8WXG6 1647 aa8.8□□□□□ -1
FAM49B-218ENST00000520887 NCOA1Q15788 1441 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms