RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	AXIN1	O15169	862 aa		10.5	□□□□□ -0.73
MSR1-211	ENST00000520846	NR3C2	P08235	984 aa		10.5	□□□□□ -0.73
MSR1-211	ENST00000520846	SMCP	P49901	116 aa	Predicted RBP	10.5	□□□□□ -0.73
MSR1-211	ENST00000520846	NBPF20	Q3BBV1	942 aa		10.5	□□□□□ -0.73
MSR1-211	ENST00000520846	POM121	Q96HA1	1249 aa		10.5	□□□□□ -0.73
MSR1-211	ENST00000520846	ST8SIA5	O15466	376 aa		10.49	□□□□□ -0.73
MSR1-211	ENST00000520846	AAAS	Q9NRG9	546 aa		10.49	□□□□□ -0.73
MSR1-211	ENST00000520846	MCCD1	P59942	119 aa	Predicted RBP	10.48	□□□□□ -0.73
MSR1-211	ENST00000520846	ZNF592	Q92610	1267 aa		10.48	□□□□□ -0.73
MSR1-211	ENST00000520846	WASHC4	Q2M389	1173 aa		10.47	□□□□□ -0.73
MSR1-211	ENST00000520846	CCDC116	Q8IYX3	515 aa		10.47	□□□□□ -0.73
MSR1-211	ENST00000520846	CAPN5	O15484	640 aa	Predicted RBP	10.46	□□□□□ -0.73
MSR1-211	ENST00000520846	WDR4	P57081	412 aa	Known RBP	10.46	□□□□□ -0.73
MSR1-211	ENST00000520846	KLF16	Q9BXK1	252 aa	Predicted RBP	10.46	□□□□□ -0.73
MSR1-211	ENST00000520846	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
MSR1-211	ENST00000520846	VAC14	Q08AM6	782 aa		10.45	□□□□□ -0.74
MSR1-211	ENST00000520846	INTS6L	Q5JSJ4	861 aa	Known RBP	10.45	□□□□□ -0.74
MSR1-211	ENST00000520846	WWC1	Q8IX03	1113 aa		10.45	□□□□□ -0.74
MSR1-211	ENST00000520846	TIMP2	P16035	220 aa		10.44	□□□□□ -0.74
MSR1-211	ENST00000520846	DHX9	Q08211	1270 aa	Known RBP	10.44	□□□□□ -0.74
MSR1-211	ENST00000520846	EMILIN1	Q9Y6C2	1016 aa		10.44	□□□□□ -0.74
MSR1-211	ENST00000520846	ESPN	B1AK53	854 aa		10.43	□□□□□ -0.74
MSR1-211	ENST00000520846	ZIC2	O95409	532 aa	Predicted RBP	10.43	□□□□□ -0.74
MSR1-211	ENST00000520846	RAB15	P59190	212 aa		10.43	□□□□□ -0.74
MSR1-211	ENST00000520846	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.43	□□□□□ -0.74
MSR1-211	ENST00000520846	SEPT12	Q8IYM1	358 aa		10.43	□□□□□ -0.74
MSR1-211	ENST00000520846	ITPKC	Q96DU7	683 aa		10.43	□□□□□ -0.74
MSR1-211	ENST00000520846	GIGYF1	O75420	1035 aa	Predicted RBP	10.42	□□□□□ -0.74
MSR1-211	ENST00000520846	CLUAP1	Q96AJ1	413 aa		10.42	□□□□□ -0.74
MSR1-211	ENST00000520846	ZFAND3	Q9H8U3	227 aa		10.42	□□□□□ -0.74
MSR1-211	ENST00000520846	DACH1	Q9UI36	760 aa		10.42	□□□□□ -0.74
MSR1-211	ENST00000520846	GTF3C3	Q9Y5Q9	886 aa		10.42	□□□□□ -0.74
MSR1-211	ENST00000520846	PGPEP1	Q9NXJ5	209 aa		10.41	□□□□□ -0.74
MSR1-211	ENST00000520846	RNF20	Q5VTR2	975 aa		10.4	□□□□□ -0.74
MSR1-211	ENST00000520846	CEP126	Q9P2H0	1117 aa		10.4	□□□□□ -0.74
MSR1-211	ENST00000520846	ERVH48-1	M5A8F1	160 aa		10.39	□□□□□ -0.75
MSR1-211	ENST00000520846	ATP13A2	Q9NQ11	1180 aa		10.39	□□□□□ -0.75
MSR1-211	ENST00000520846	SOX11	P35716	441 aa		10.38	□□□□□ -0.75
MSR1-211	ENST00000520846	CCDC125	Q86Z20	511 aa		10.38	□□□□□ -0.75
MSR1-211	ENST00000520846	SEMA3F	Q13275	785 aa		10.37	□□□□□ -0.75
MSR1-211	ENST00000520846	TMPRSS4	Q9NRS4	437 aa		10.37	□□□□□ -0.75
MSR1-211	ENST00000520846		A6NJR5	290 aa		10.36	□□□□□ -0.75
MSR1-211	ENST00000520846	BMP1	P13497	986 aa		10.36	□□□□□ -0.75
MSR1-211	ENST00000520846	PROSER2	Q86WR7	435 aa	Predicted RBP	10.36	□□□□□ -0.75
MSR1-211	ENST00000520846	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.35	□□□□□ -0.75
MSR1-211	ENST00000520846	TRIM52	Q96A61	297 aa		10.35	□□□□□ -0.75
MSR1-211	ENST00000520846	MRPL14	Q6P1L8	145 aa	Known RBP	10.34	□□□□□ -0.75
MSR1-211	ENST00000520846	TRIM46	Q7Z4K8	759 aa		10.34	□□□□□ -0.75
MSR1-211	ENST00000520846	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.34	□□□□□ -0.75
MSR1-211	ENST00000520846	MEIOB	Q8N635	442 aa		10.34	□□□□□ -0.75
MSR1-211	ENST00000520846	GMPR2	Q9P2T1	348 aa	Known RBP	10.34	□□□□□ -0.75
MSR1-211	ENST00000520846	CBLB	Q13191	982 aa		10.33	□□□□□ -0.76
MSR1-211	ENST00000520846	SLFNL1	Q499Z3	407 aa		10.33	□□□□□ -0.76
MSR1-211	ENST00000520846		Q6ZVU0	165 aa		10.33	□□□□□ -0.76
MSR1-211	ENST00000520846	ALG2	Q9H553	416 aa		10.33	□□□□□ -0.76
MSR1-211	ENST00000520846	POM121C	A8CG34	1229 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	POTEC	B2RU33	542 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	UPP2	O95045	317 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	SCARF1	Q14162	830 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	ZNF787	Q6DD87	383 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	SENP2	Q9HC62	589 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	CYLD	Q9NQC7	956 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	PCDHB11	Q9Y5F2	797 aa		10.32	□□□□□ -0.76
MSR1-211	ENST00000520846	LILRA1	O75019	489 aa		10.31	□□□□□ -0.76
MSR1-211	ENST00000520846	RNF135	Q8IUD6	432 aa		10.31	□□□□□ -0.76
MSR1-211	ENST00000520846	PHTF2	Q8N3S3	785 aa		10.31	□□□□□ -0.76
MSR1-211	ENST00000520846	TSEN34	Q9BSV6	310 aa	Known RBP	10.31	□□□□□ -0.76
MSR1-211	ENST00000520846	C11orf95	C9JLR9	678 aa	Predicted RBP	10.3	□□□□□ -0.76
MSR1-211	ENST00000520846	LINC00528	Q8N1L1	170 aa		10.3	□□□□□ -0.76
MSR1-211	ENST00000520846	ZFP42	Q96MM3	310 aa		10.3	□□□□□ -0.76
MSR1-211	ENST00000520846	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.3	□□□□□ -0.76
MSR1-211	ENST00000520846	PURB	Q96QR8	312 aa	Known RBP	10.3	□□□□□ -0.76
MSR1-211	ENST00000520846	ADD1	P35611	737 aa	Known RBP	10.29	□□□□□ -0.76
MSR1-211	ENST00000520846	C6orf118	Q5T5N4	469 aa		10.29	□□□□□ -0.76
MSR1-211	ENST00000520846	BMP2	P12643	396 aa		10.28	□□□□□ -0.76
MSR1-211	ENST00000520846	ERVK-9	P63128	1117 aa		10.28	□□□□□ -0.76
MSR1-211	ENST00000520846	HDGFL1	Q5TGJ6	251 aa		10.28	□□□□□ -0.76
MSR1-211	ENST00000520846	KIFC2	Q96AC6	838 aa		10.28	□□□□□ -0.76
MSR1-211	ENST00000520846	TRIM47	Q96LD4	638 aa		10.28	□□□□□ -0.76
MSR1-211	ENST00000520846	TSGA10IP	Q3SY00	556 aa		10.27	□□□□□ -0.77
MSR1-211	ENST00000520846	CC2D2B	Q6DHV5	1058 aa		10.27	□□□□□ -0.77
MSR1-211	ENST00000520846	ADAMTS19	Q8TE59	1207 aa		10.27	□□□□□ -0.77
MSR1-211	ENST00000520846	AGBL1	Q96MI9	1066 aa		10.27	□□□□□ -0.77
MSR1-211	ENST00000520846	ESF1	Q9H501	851 aa	Known RBP	10.27	□□□□□ -0.77
MSR1-211	ENST00000520846	DOLK	Q9UPQ8	538 aa		10.27	□□□□□ -0.77
MSR1-211	ENST00000520846	ADH1A	P07327	375 aa		10.26	□□□□□ -0.77
MSR1-211	ENST00000520846	SCTR	P47872	440 aa		10.26	□□□□□ -0.77
MSR1-211	ENST00000520846	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.26	□□□□□ -0.77
MSR1-211	ENST00000520846	CHIC2	Q9UKJ5	165 aa		10.26	□□□□□ -0.77
MSR1-211	ENST00000520846	TRAK2	O60296	914 aa		10.25	□□□□□ -0.77
MSR1-211	ENST00000520846	SNRPB	P14678	240 aa	Known RBP	10.25	□□□□□ -0.77
MSR1-211	ENST00000520846	RELB	Q01201	579 aa		10.25	□□□□□ -0.77
MSR1-211	ENST00000520846	PIK3CD	O00329	1044 aa		10.24	□□□□□ -0.77
MSR1-211	ENST00000520846	MYC	P01106	439 aa	Predicted RBP	10.24	□□□□□ -0.77
MSR1-211	ENST00000520846	MAP7D1	Q3KQU3	841 aa		10.24	□□□□□ -0.77
MSR1-211	ENST00000520846	PLPP7	Q8NBV4	271 aa		10.24	□□□□□ -0.77
MSR1-211	ENST00000520846	ZMYND15	Q9H091	742 aa		10.24	□□□□□ -0.77
MSR1-211	ENST00000520846	SPINT1	O43278	529 aa		10.23	□□□□□ -0.77
MSR1-211	ENST00000520846	KDF1	Q8NAX2	398 aa	Predicted RBP	10.23	□□□□□ -0.77
MSR1-211	ENST00000520846	NFATC2IP	Q8NCF5	419 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms