RNA–Protein interactions for RNA: ENST00000520115.5

VDAC3-205, Transcript of voltage dependent anion channel 3, humanhuman

TSL 4

Gene VDAC3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-205ENST00000520115 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
VDAC3-205ENST00000520115 ATF3P18847 181 aa16.46■□□□□ 0.23
VDAC3-205ENST00000520115 PSME1Q06323 249 aa16.46■□□□□ 0.23
VDAC3-205ENST00000520115 NFE2L2Q16236 605 aa16.45■□□□□ 0.22
VDAC3-205ENST00000520115 MSH6P52701 1360 aa16.45■□□□□ 0.22
VDAC3-205ENST00000520115 NLRP6P59044 892 aa16.44■□□□□ 0.22
VDAC3-205ENST00000520115 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
VDAC3-205ENST00000520115 PMFBP1Q8TBY8 1022 aa16.44■□□□□ 0.22
VDAC3-205ENST00000520115 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
VDAC3-205ENST00000520115 ABCC6O95255 1503 aa16.44■□□□□ 0.22
VDAC3-205ENST00000520115 KDRP35968 1356 aa16.43■□□□□ 0.22
VDAC3-205ENST00000520115 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
VDAC3-205ENST00000520115 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
VDAC3-205ENST00000520115 XIRP1Q702N8 1843 aaKnown RBP16.42■□□□□ 0.22
VDAC3-205ENST00000520115 C1orf167Q5SNV9 1468 aa16.42■□□□□ 0.22
VDAC3-205ENST00000520115 RIPK4P57078 832 aa16.42■□□□□ 0.22
VDAC3-205ENST00000520115 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
VDAC3-205ENST00000520115 CCDC136Q96JN2 1154 aa16.42■□□□□ 0.22
VDAC3-205ENST00000520115 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
VDAC3-205ENST00000520115 AMPHP49418 695 aa16.41■□□□□ 0.22
VDAC3-205ENST00000520115 GNAI1P63096 354 aa16.41■□□□□ 0.22
VDAC3-205ENST00000520115 RGPD1P0DJD0 1748 aa16.41■□□□□ 0.22
VDAC3-205ENST00000520115 TMEM94Q12767 1356 aa16.4■□□□□ 0.22
VDAC3-205ENST00000520115 HTATSF1O43719 755 aaKnown RBP16.4■□□□□ 0.22
VDAC3-205ENST00000520115 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
VDAC3-205ENST00000520115 RGPD8O14715 1765 aaPredicted RBP16.4■□□□□ 0.22
VDAC3-205ENST00000520115 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
VDAC3-205ENST00000520115 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
VDAC3-205ENST00000520115 SLIT3O75094 1523 aa16.4■□□□□ 0.22
VDAC3-205ENST00000520115 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
VDAC3-205ENST00000520115 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
VDAC3-205ENST00000520115 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
VDAC3-205ENST00000520115 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
VDAC3-205ENST00000520115 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
VDAC3-205ENST00000520115 IGSF1Q8N6C5 1336 aa16.38■□□□□ 0.21
VDAC3-205ENST00000520115 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
VDAC3-205ENST00000520115 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
VDAC3-205ENST00000520115 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
VDAC3-205ENST00000520115 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
VDAC3-205ENST00000520115 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
VDAC3-205ENST00000520115 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
VDAC3-205ENST00000520115 NFAT5O94916 1531 aa16.36■□□□□ 0.21
VDAC3-205ENST00000520115 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
VDAC3-205ENST00000520115 USP19O94966 1318 aa16.36■□□□□ 0.21
VDAC3-205ENST00000520115 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
VDAC3-205ENST00000520115 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
VDAC3-205ENST00000520115 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
VDAC3-205ENST00000520115 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
VDAC3-205ENST00000520115 PEAK1Q9H792 1746 aa16.34■□□□□ 0.21
VDAC3-205ENST00000520115 HOXC9P31274 260 aa16.34■□□□□ 0.21
VDAC3-205ENST00000520115 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
VDAC3-205ENST00000520115 IP6K1Q92551 441 aa16.34■□□□□ 0.21
VDAC3-205ENST00000520115 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
VDAC3-205ENST00000520115 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.2
VDAC3-205ENST00000520115 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
VDAC3-205ENST00000520115 SULT6B1Q6IMI4 303 aa16.33■□□□□ 0.2
VDAC3-205ENST00000520115 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
VDAC3-205ENST00000520115 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.2
VDAC3-205ENST00000520115 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.2
VDAC3-205ENST00000520115 HMOX1P09601 288 aa16.31■□□□□ 0.2
VDAC3-205ENST00000520115 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
VDAC3-205ENST00000520115 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
VDAC3-205ENST00000520115 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
VDAC3-205ENST00000520115 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
VDAC3-205ENST00000520115 KRT28Q7Z3Y7 464 aa16.3■□□□□ 0.2
VDAC3-205ENST00000520115 TNS3Q68CZ2 1445 aa16.29■□□□□ 0.2
VDAC3-205ENST00000520115 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
VDAC3-205ENST00000520115 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
VDAC3-205ENST00000520115 NCAPD2Q15021 1401 aa16.28■□□□□ 0.2
VDAC3-205ENST00000520115 ALS2Q96Q42 1657 aa16.28■□□□□ 0.2
VDAC3-205ENST00000520115 ROBO1Q9Y6N7 1651 aa16.28■□□□□ 0.2
VDAC3-205ENST00000520115 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
VDAC3-205ENST00000520115 CENPQQ7L2Z9 268 aaPredicted RBP16.28■□□□□ 0.2
VDAC3-205ENST00000520115 ARHGAP45Q92619 1136 aa16.28■□□□□ 0.2
VDAC3-205ENST00000520115 FOXO3O43524 673 aa16.27■□□□□ 0.2
VDAC3-205ENST00000520115 GCP02774 474 aa16.27■□□□□ 0.2
VDAC3-205ENST00000520115 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
VDAC3-205ENST00000520115 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.2
VDAC3-205ENST00000520115 LTN1O94822 1766 aa16.26■□□□□ 0.19
VDAC3-205ENST00000520115 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
VDAC3-205ENST00000520115 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
VDAC3-205ENST00000520115 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
VDAC3-205ENST00000520115 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
VDAC3-205ENST00000520115 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
VDAC3-205ENST00000520115 CPDO75976 1380 aa16.26■□□□□ 0.19
VDAC3-205ENST00000520115 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
VDAC3-205ENST00000520115 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
VDAC3-205ENST00000520115 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
VDAC3-205ENST00000520115 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
VDAC3-205ENST00000520115 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
VDAC3-205ENST00000520115 EYA1Q99502 592 aa16.24■□□□□ 0.19
VDAC3-205ENST00000520115 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
VDAC3-205ENST00000520115 PXDNQ92626 1479 aa16.23■□□□□ 0.19
VDAC3-205ENST00000520115 FBLN1P23142 703 aa16.23■□□□□ 0.19
VDAC3-205ENST00000520115 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
VDAC3-205ENST00000520115 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
VDAC3-205ENST00000520115 MAP3K5Q99683 1374 aa16.23■□□□□ 0.19
VDAC3-205ENST00000520115 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
VDAC3-205ENST00000520115 LRRC37A3O60309 1634 aa16.21■□□□□ 0.19
VDAC3-205ENST00000520115 CHL1O00533 1208 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms