RNA–Protein interactions for RNA: ENST00000519529.1

CHMP7-206, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 690 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-206ENST00000519529 WNK3Q9BYP7 1800 aa28.28■■■□□ 2.12
CHMP7-206ENST00000519529 TESK2Q96S53 571 aa28.28■■■□□ 2.12
CHMP7-206ENST00000519529 TERF2IPQ9NYB0 399 aa28.28■■■□□ 2.12
CHMP7-206ENST00000519529 LTN1O94822 1766 aa28.28■■■□□ 2.12
CHMP7-206ENST00000519529 TRIM37O94972 964 aa28.27■■■□□ 2.12
CHMP7-206ENST00000519529 EN1Q05925 392 aaPredicted RBP28.27■■■□□ 2.12
CHMP7-206ENST00000519529 NME9Q86XW9 330 aa28.27■■■□□ 2.12
CHMP7-206ENST00000519529 PUS7Q96PZ0 661 aaKnown RBP28.27■■■□□ 2.12
CHMP7-206ENST00000519529 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
CHMP7-206ENST00000519529 A0A1W2PP64 1363 aa28.25■■■□□ 2.11
CHMP7-206ENST00000519529 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
CHMP7-206ENST00000519529 EDC4Q6P2E9 1401 aaKnown RBP28.25■■■□□ 2.11
CHMP7-206ENST00000519529 USP31Q70CQ4 1352 aa28.24■■■□□ 2.11
CHMP7-206ENST00000519529 CSB-PGBD3P0DP91 1061 aa28.24■■■□□ 2.11
CHMP7-206ENST00000519529 SLC24A1O60721 1099 aa28.23■■■□□ 2.11
CHMP7-206ENST00000519529 LRRC37A3O60309 1634 aa28.22■■■□□ 2.11
CHMP7-206ENST00000519529 USP47Q96K76 1375 aa28.22■■■□□ 2.11
CHMP7-206ENST00000519529 DISP2A7MBM2 1401 aa28.2■■■□□ 2.11
CHMP7-206ENST00000519529 NINLQ9Y2I6 1382 aa28.2■■■□□ 2.1
CHMP7-206ENST00000519529 ABCC6O95255 1503 aa28.19■■■□□ 2.1
CHMP7-206ENST00000519529 APBA3O96018 575 aa28.18■■■□□ 2.1
CHMP7-206ENST00000519529 DDB1Q16531 1140 aa28.18■■■□□ 2.1
CHMP7-206ENST00000519529 SBF2Q86WG5 1849 aa28.18■■■□□ 2.1
CHMP7-206ENST00000519529 EZH2Q15910 746 aaKnown RBP28.17■■■□□ 2.1
CHMP7-206ENST00000519529 TMF1P82094 1093 aa28.16■■■□□ 2.1
CHMP7-206ENST00000519529 CARD10Q9BWT7 1032 aa28.16■■■□□ 2.1
CHMP7-206ENST00000519529 PSDA5PKW4 1024 aaPredicted RBP28.15■■■□□ 2.1
CHMP7-206ENST00000519529 PEAK1Q9H792 1746 aa28.15■■■□□ 2.1
CHMP7-206ENST00000519529 OVOS2A0A0G2JMS6 1433 aa28.14■■■□□ 2.1
CHMP7-206ENST00000519529 OVOS2A0A0J9YW53 1432 aa28.14■■■□□ 2.1
CHMP7-206ENST00000519529 OVOS2Q6IE36 1432 aa28.14■■■□□ 2.1
CHMP7-206ENST00000519529 CLSPNQ9HAW4 1339 aa28.14■■■□□ 2.09
CHMP7-206ENST00000519529 TIMELESSQ9UNS1 1208 aa28.13■■■□□ 2.09
CHMP7-206ENST00000519529 CAMKK2Q96RR4 588 aa28.12■■■□□ 2.09
CHMP7-206ENST00000519529 CDCA7Q9BWT1 371 aaPredicted RBP28.12■■■□□ 2.09
CHMP7-206ENST00000519529 C11orf95C9JLR9 678 aaPredicted RBP28.11■■■□□ 2.09
CHMP7-206ENST00000519529 RREB1Q92766 1687 aa28.1■■■□□ 2.09
CHMP7-206ENST00000519529 ANKRD36BQ8N2N9 1353 aa28.1■■■□□ 2.09
CHMP7-206ENST00000519529 CCDC7Q96M83 1385 aa28.1■■■□□ 2.09
CHMP7-206ENST00000519529 ERBB3P21860 1342 aa28.09■■■□□ 2.09
CHMP7-206ENST00000519529 COG3Q96JB2 828 aa28.08■■■□□ 2.09
CHMP7-206ENST00000519529 NLRP2Q9NX02 1062 aa28.08■■■□□ 2.09
CHMP7-206ENST00000519529 PARD3Q8TEW0 1356 aa28.08■■■□□ 2.09
CHMP7-206ENST00000519529 NUP188Q5SRE5 1749 aa28.06■■■□□ 2.08
CHMP7-206ENST00000519529 KAT6BQ8WYB5 2073 aa28.06■■■□□ 2.08
CHMP7-206ENST00000519529 R3HDM1Q15032 1099 aaKnown RBP28.06■■■□□ 2.08
CHMP7-206ENST00000519529 ANKRD24Q8TF21 1146 aa28.06■■■□□ 2.08
CHMP7-206ENST00000519529 EXOC5O00471 708 aa28.05■■■□□ 2.08
CHMP7-206ENST00000519529 CDCA8Q53HL2 280 aa28.05■■■□□ 2.08
CHMP7-206ENST00000519529 MARCH10Q8NA82 808 aaPredicted RBP28.05■■■□□ 2.08
CHMP7-206ENST00000519529 KIF20BQ96Q89 1820 aa28.04■■■□□ 2.08
CHMP7-206ENST00000519529 LRP5O75197 1615 aa28.03■■■□□ 2.08
CHMP7-206ENST00000519529 FAM208AQ9UK61 1670 aaKnown RBP28.02■■■□□ 2.08
CHMP7-206ENST00000519529 TNS2Q63HR2 1409 aa28.01■■■□□ 2.07
CHMP7-206ENST00000519529 MYOM1P52179 1685 aa28■■■□□ 2.07
CHMP7-206ENST00000519529 CCER1Q8TC90 406 aaPredicted RBP28■■■□□ 2.07
CHMP7-206ENST00000519529 IP6K1Q92551 441 aa28■■■□□ 2.07
CHMP7-206ENST00000519529 LTV1Q96GA3 475 aaPredicted RBP28■■■□□ 2.07
CHMP7-206ENST00000519529 RGPD3A6NKT7 1758 aaPredicted RBP28■■■□□ 2.07
CHMP7-206ENST00000519529 RGPD4Q7Z3J3 1758 aa28■■■□□ 2.07
CHMP7-206ENST00000519529 FBLN1P23142 703 aa27.99■■■□□ 2.07
CHMP7-206ENST00000519529 RGPD2P0DJD1 1756 aa27.99■■■□□ 2.07
CHMP7-206ENST00000519529 IL2RBP14784 551 aa27.98■■■□□ 2.07
CHMP7-206ENST00000519529 GGNBP2Q9H3C7 697 aa27.98■■■□□ 2.07
CHMP7-206ENST00000519529 MAP3K19Q56UN5 1328 aa27.97■■■□□ 2.07
CHMP7-206ENST00000519529 AMPHP49418 695 aa27.97■■■□□ 2.07
CHMP7-206ENST00000519529 PTF1AQ7RTS3 328 aa27.97■■■□□ 2.07
CHMP7-206ENST00000519529 BCL11BQ9C0K0 894 aaPredicted RBP27.97■■■□□ 2.07
CHMP7-206ENST00000519529 BCL9O00512 1426 aa27.96■■■□□ 2.07
CHMP7-206ENST00000519529 FYB1O15117 783 aa27.96■■■□□ 2.07
CHMP7-206ENST00000519529 NBPF14Q5TI25 921 aa27.96■■■□□ 2.07
CHMP7-206ENST00000519529 HOXC9P31274 260 aa27.94■■■□□ 2.06
CHMP7-206ENST00000519529 PLSCR1O15162 318 aa27.93■■■□□ 2.06
CHMP7-206ENST00000519529 RRS1Q15050 365 aaKnown RBP27.91■■■□□ 2.06
CHMP7-206ENST00000519529 NHSQ6T4R5 1651 aa27.91■■■□□ 2.06
CHMP7-206ENST00000519529 POLR3GLQ9BT43 218 aa27.89■■■□□ 2.06
CHMP7-206ENST00000519529 ACSBG1Q96GR2 724 aa27.88■■■□□ 2.05
CHMP7-206ENST00000519529 NSD3Q9BZ95 1437 aa27.88■■■□□ 2.05
CHMP7-206ENST00000519529 RTL1A6NKG5 1358 aa27.87■■■□□ 2.05
CHMP7-206ENST00000519529 CARD14Q9BXL6 1004 aa27.87■■■□□ 2.05
CHMP7-206ENST00000519529 KCNQ2O43526 872 aa27.86■■■□□ 2.05
CHMP7-206ENST00000519529 BTAF1O14981 1849 aa27.85■■■□□ 2.05
CHMP7-206ENST00000519529 EIF4G2P78344 907 aaKnown RBP eCLIP27.84■■■□□ 2.052e-8■■■■■ 35.8
CHMP7-206ENST00000519529 DDX54Q8TDD1 881 aaKnown RBP27.82■■■□□ 2.04
CHMP7-206ENST00000519529 MAP2P11137 1827 aaKnown RBP27.82■■■□□ 2.04
CHMP7-206ENST00000519529 SMG6Q86US8 1419 aaKnown RBP27.82■■■□□ 2.04
CHMP7-206ENST00000519529 PROM2Q8N271 834 aa27.81■■■□□ 2.04
CHMP7-206ENST00000519529 HSPA5P11021 654 aaKnown RBP27.8■■■□□ 2.04
CHMP7-206ENST00000519529 TXNRD1Q16881 649 aa27.8■■■□□ 2.04
CHMP7-206ENST00000519529 SHANK3Q9BYB0 1731 aa27.8■■■□□ 2.04
CHMP7-206ENST00000519529 ANO8Q9HCE9 1232 aaPredicted RBP27.79■■■□□ 2.04
CHMP7-206ENST00000519529 FLT4P35916 1363 aa27.77■■■□□ 2.04
CHMP7-206ENST00000519529 HSP90AB2PQ58FF8 381 aa27.77■■■□□ 2.04
CHMP7-206ENST00000519529 NBPF6Q5VWK0 638 aa27.77■■■□□ 2.04
CHMP7-206ENST00000519529 USHBP1Q8N6Y0 703 aa27.77■■■□□ 2.04
CHMP7-206ENST00000519529 NBPF4Q96M43 638 aa27.77■■■□□ 2.04
CHMP7-206ENST00000519529 MEGF6O75095 1541 aa27.77■■■□□ 2.04
CHMP7-206ENST00000519529 DOT1LQ8TEK3 1739 aa27.76■■■□□ 2.03
CHMP7-206ENST00000519529 CGNL1Q0VF96 1302 aa27.76■■■□□ 2.03
CHMP7-206ENST00000519529 INSRP06213 1382 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms