RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 DRC1Q96MC2 740 aa10.4□□□□□ -0.75
CLK4-202ENST00000519132 SEPT3Q9UH03 358 aa10.4□□□□□ -0.75
CLK4-202ENST00000519132 SEPT9Q9UHD8 586 aaPredicted RBP10.4□□□□□ -0.75
CLK4-202ENST00000519132 FBXO33Q7Z6M2 555 aa10.39□□□□□ -0.75
CLK4-202ENST00000519132 CWC22Q9HCG8 908 aaKnown RBP10.39□□□□□ -0.75
CLK4-202ENST00000519132 MAP10Q9P2G4 905 aa10.39□□□□□ -0.75
CLK4-202ENST00000519132 AQRO60306 1485 aaKnown RBP eCLIP10.39□□□□□ -0.751e-8■■■□□ 18.8
CLK4-202ENST00000519132 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
CLK4-202ENST00000519132 ADAMTS12P58397 1594 aa10.38□□□□□ -0.75
CLK4-202ENST00000519132 SWT1Q5T5J6 900 aaKnown RBP10.38□□□□□ -0.75
CLK4-202ENST00000519132 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLK4-202ENST00000519132 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
CLK4-202ENST00000519132 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
CLK4-202ENST00000519132 CARMIL1Q5VZK9 1371 aa10.38□□□□□ -0.75
CLK4-202ENST00000519132 FAM196BA6NMK8 535 aa10.37□□□□□ -0.75
CLK4-202ENST00000519132 LHX6Q9UPM6 363 aa10.37□□□□□ -0.75
CLK4-202ENST00000519132 TNIKQ9UKE5 1360 aa10.37□□□□□ -0.75
CLK4-202ENST00000519132 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
CLK4-202ENST00000519132 DNAJC2Q99543 621 aaKnown RBP10.36□□□□□ -0.75
CLK4-202ENST00000519132 MAGI1Q96QZ7 1491 aaPredicted RBP10.36□□□□□ -0.75
CLK4-202ENST00000519132 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
CLK4-202ENST00000519132 ECM1Q16610 540 aa10.36□□□□□ -0.75
CLK4-202ENST00000519132 B4GALNT3Q6L9W6 998 aa10.36□□□□□ -0.75
CLK4-202ENST00000519132 FHAD1B1AJZ9 1412 aa10.35□□□□□ -0.75
CLK4-202ENST00000519132 SOX11P35716 441 aa10.35□□□□□ -0.75
CLK4-202ENST00000519132 OGFOD1Q8N543 542 aa10.35□□□□□ -0.75
CLK4-202ENST00000519132 NR1H3Q13133 447 aa10.34□□□□□ -0.75
CLK4-202ENST00000519132 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
CLK4-202ENST00000519132 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
CLK4-202ENST00000519132 SPATA32Q96LK8 384 aa10.34□□□□□ -0.75
CLK4-202ENST00000519132 MAPK1P28482 360 aa10.33□□□□□ -0.76
CLK4-202ENST00000519132 CLP1Q92989 425 aaKnown RBP10.33□□□□□ -0.76
CLK4-202ENST00000519132 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
CLK4-202ENST00000519132 ANKMY2Q8IV38 441 aa10.33□□□□□ -0.76
CLK4-202ENST00000519132 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
CLK4-202ENST00000519132 LDLRAD1Q5T700 205 aa10.33□□□□□ -0.76
CLK4-202ENST00000519132 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
CLK4-202ENST00000519132 RNF40O75150 1001 aa10.32□□□□□ -0.76
CLK4-202ENST00000519132 ZC3H6P61129 1189 aaKnown RBP10.32□□□□□ -0.76
CLK4-202ENST00000519132 POLR3GLQ9BT43 218 aa10.32□□□□□ -0.76
CLK4-202ENST00000519132 OCLNQ16625 522 aa10.31□□□□□ -0.76
CLK4-202ENST00000519132 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
CLK4-202ENST00000519132 ZBBXA8MT70 800 aa10.31□□□□□ -0.76
CLK4-202ENST00000519132 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
CLK4-202ENST00000519132 USP46P62068 366 aa10.3□□□□□ -0.76
CLK4-202ENST00000519132 DNMT3AQ9Y6K1 912 aaPredicted RBP10.29□□□□□ -0.76
CLK4-202ENST00000519132 NEFLP07196 543 aa10.29□□□□□ -0.76
CLK4-202ENST00000519132 ERCC5P28715 1186 aaPredicted RBP10.29□□□□□ -0.76
CLK4-202ENST00000519132 HDLBPQ00341 1268 aaKnown RBP10.29□□□□□ -0.76
CLK4-202ENST00000519132 SLFNL1Q499Z3 407 aa10.29□□□□□ -0.76
CLK4-202ENST00000519132 ARHGAP4P98171 946 aa10.29□□□□□ -0.76
CLK4-202ENST00000519132 LARP1Q6PKG0 1096 aaKnown RBP10.29□□□□□ -0.76
CLK4-202ENST00000519132 PLPP7Q8NBV4 271 aa10.29□□□□□ -0.76
CLK4-202ENST00000519132 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
CLK4-202ENST00000519132 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
CLK4-202ENST00000519132 GRIN2AQ12879 1464 aa10.28□□□□□ -0.76
CLK4-202ENST00000519132 CFHP08603 1231 aa10.28□□□□□ -0.76
CLK4-202ENST00000519132 GLYCTKQ8IVS8 523 aa10.28□□□□□ -0.76
CLK4-202ENST00000519132 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
CLK4-202ENST00000519132 DKK1O94907 266 aa10.27□□□□□ -0.76
CLK4-202ENST00000519132 BLOC1S3Q6QNY0 202 aa10.27□□□□□ -0.76
CLK4-202ENST00000519132 CEP162Q5TB80 1403 aa10.27□□□□□ -0.76
CLK4-202ENST00000519132 HAX1O00165 279 aa10.27□□□□□ -0.77
CLK4-202ENST00000519132 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
CLK4-202ENST00000519132 DPH6Q7L8W6 267 aa10.27□□□□□ -0.77
CLK4-202ENST00000519132 GTF3C2Q8WUA4 911 aaPredicted RBP10.27□□□□□ -0.77
CLK4-202ENST00000519132 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
CLK4-202ENST00000519132 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
CLK4-202ENST00000519132 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
CLK4-202ENST00000519132 NAA30Q147X3 362 aaPredicted RBP10.27□□□□□ -0.77
CLK4-202ENST00000519132 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
CLK4-202ENST00000519132 TNNI2P48788 182 aa10.26□□□□□ -0.77
CLK4-202ENST00000519132 RNF135Q8IUD6 432 aa10.26□□□□□ -0.77
CLK4-202ENST00000519132 PLEKHM2Q8IWE5 1019 aa10.26□□□□□ -0.77
CLK4-202ENST00000519132 KCNK17Q96T54 332 aa10.26□□□□□ -0.77
CLK4-202ENST00000519132 FKBPLQ9UIM3 349 aa10.26□□□□□ -0.77
CLK4-202ENST00000519132 CHD1O14646 1710 aa10.25□□□□□ -0.77
CLK4-202ENST00000519132 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
CLK4-202ENST00000519132 ERCC3P19447 782 aa10.25□□□□□ -0.77
CLK4-202ENST00000519132 DHX38Q92620 1227 aaKnown RBP10.25□□□□□ -0.77
CLK4-202ENST00000519132 C8orf37Q96NL8 207 aa10.25□□□□□ -0.77
CLK4-202ENST00000519132 RAD51AP2Q09MP3 1159 aa10.24□□□□□ -0.77
CLK4-202ENST00000519132 PACS2Q86VP3 889 aa10.24□□□□□ -0.77
CLK4-202ENST00000519132 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
CLK4-202ENST00000519132 METRNQ9UJH8 293 aa10.24□□□□□ -0.77
CLK4-202ENST00000519132 NUP160Q12769 1436 aa10.23□□□□□ -0.77
CLK4-202ENST00000519132 ICMTO60725 284 aa10.23□□□□□ -0.77
CLK4-202ENST00000519132 IQSEC3Q9UPP2 1182 aaPredicted RBP10.23□□□□□ -0.77
CLK4-202ENST00000519132 IQGAP2Q13576 1575 aa10.23□□□□□ -0.77
CLK4-202ENST00000519132 PTPREP23469 700 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 PHTF2Q8N3S3 785 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 UBXN4Q92575 508 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 PCDHB9Q9Y5E1 797 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 EFCAB5A4FU69 1503 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 CLIP1P30622 1438 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 PSEN2P49810 448 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 CEP170Q5SW79 1584 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 KIAA0586Q9BVV6 1533 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 ZBTB7BO15156 539 aaPredicted RBP10.22□□□□□ -0.77
CLK4-202ENST00000519132 CDCA7Q9BWT1 371 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms