RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 USP31Q70CQ4 1352 aa10.52□□□□□ -0.72
CSGALNACT1-206ENST00000518542 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 FYB1O15117 783 aa10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 RBM6P78332 1123 aaKnown RBP10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 KCNH5Q8NCM2 988 aa10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 USP19O94966 1318 aa10.52□□□□□ -0.73
CSGALNACT1-206ENST00000518542 GCP02774 474 aa10.51□□□□□ -0.73
CSGALNACT1-206ENST00000518542 C8orf37Q96NL8 207 aa10.51□□□□□ -0.73
CSGALNACT1-206ENST00000518542 GGNBP2Q9H3C7 697 aa10.51□□□□□ -0.73
CSGALNACT1-206ENST00000518542 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
CSGALNACT1-206ENST00000518542 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
CSGALNACT1-206ENST00000518542 NSD2O96028 1365 aa10.5□□□□□ -0.73
CSGALNACT1-206ENST00000518542 ANKRD26Q9UPS8 1709 aa10.5□□□□□ -0.73
CSGALNACT1-206ENST00000518542 SLIT3O75094 1523 aa10.49□□□□□ -0.73
CSGALNACT1-206ENST00000518542 SOX12O15370 315 aa10.49□□□□□ -0.73
CSGALNACT1-206ENST00000518542 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
CSGALNACT1-206ENST00000518542 NGLY1Q96IV0 654 aa10.49□□□□□ -0.73
CSGALNACT1-206ENST00000518542 PRDM11Q9NQV5 511 aa10.49□□□□□ -0.73
CSGALNACT1-206ENST00000518542 OVOS2A0A0J9YW53 1432 aa10.49□□□□□ -0.73
CSGALNACT1-206ENST00000518542 OVOS2Q6IE36 1432 aa10.49□□□□□ -0.73
CSGALNACT1-206ENST00000518542 PER1O15534 1290 aaPredicted RBP10.48□□□□□ -0.73
CSGALNACT1-206ENST00000518542 ZC3H6P61129 1189 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-206ENST00000518542 SRCAPQ6ZRS2 3230 aa10.48□□□□□ -0.73
CSGALNACT1-206ENST00000518542 COL14A1Q05707 1796 aaKnown RBP10.47□□□□□ -0.73
CSGALNACT1-206ENST00000518542 ZBTB7CA1YPR0 619 aa10.47□□□□□ -0.73
CSGALNACT1-206ENST00000518542 CPDO75976 1380 aa10.47□□□□□ -0.73
CSGALNACT1-206ENST00000518542 KIAA0232Q92628 1395 aa10.47□□□□□ -0.73
CSGALNACT1-206ENST00000518542 LTN1O94822 1766 aa10.47□□□□□ -0.73
CSGALNACT1-206ENST00000518542 FAM83GA6ND36 823 aa10.46□□□□□ -0.73
CSGALNACT1-206ENST00000518542 PRR29P0C7W0 189 aa10.46□□□□□ -0.73
CSGALNACT1-206ENST00000518542 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
CSGALNACT1-206ENST00000518542 MORC1Q86VD1 984 aa10.46□□□□□ -0.73
CSGALNACT1-206ENST00000518542 ATRNO75882 1429 aa10.46□□□□□ -0.74
CSGALNACT1-206ENST00000518542 NFAT5O94916 1531 aa10.46□□□□□ -0.74
CSGALNACT1-206ENST00000518542 PLCH1Q4KWH8 1693 aa10.46□□□□□ -0.74
CSGALNACT1-206ENST00000518542 NWD2Q9ULI1 1742 aa10.46□□□□□ -0.74
CSGALNACT1-206ENST00000518542 MAP2P11137 1827 aaKnown RBP10.46□□□□□ -0.74
CSGALNACT1-206ENST00000518542 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
CSGALNACT1-206ENST00000518542 CHRNA2Q15822 529 aa10.45□□□□□ -0.74
CSGALNACT1-206ENST00000518542 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
CSGALNACT1-206ENST00000518542 ARHGEF25Q86VW2 580 aa10.45□□□□□ -0.74
CSGALNACT1-206ENST00000518542 FNBP4Q8N3X1 1017 aaPredicted RBP10.45□□□□□ -0.74
CSGALNACT1-206ENST00000518542 USP21Q9UK80 565 aa10.45□□□□□ -0.74
CSGALNACT1-206ENST00000518542 AATKQ6ZMQ8 1374 aa10.44□□□□□ -0.74
CSGALNACT1-206ENST00000518542 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
CSGALNACT1-206ENST00000518542 AMPHP49418 695 aa10.44□□□□□ -0.74
CSGALNACT1-206ENST00000518542 BTG4Q9NY30 223 aa10.44□□□□□ -0.74
CSGALNACT1-206ENST00000518542 SLIT2O94813 1529 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 BRWD3Q6RI45 1802 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 EVA1CP58658 441 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 CNGB1Q14028 1251 aaPredicted RBP10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 UNC5CLQ8IV45 518 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 MIER1Q8N108 512 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 RGPD5Q99666 1765 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 EP400Q96L91 3159 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 ABCC6O95255 1503 aa10.43□□□□□ -0.74
CSGALNACT1-206ENST00000518542 BCL9LQ86UU0 1499 aa10.42□□□□□ -0.74
CSGALNACT1-206ENST00000518542 COL18A1P39060 1754 aa10.42□□□□□ -0.74
CSGALNACT1-206ENST00000518542 LMO7Q8WWI1 1683 aa10.42□□□□□ -0.74
CSGALNACT1-206ENST00000518542 FBLN1P23142 703 aa10.42□□□□□ -0.74
CSGALNACT1-206ENST00000518542 RRS1Q15050 365 aaKnown RBP10.42□□□□□ -0.74
CSGALNACT1-206ENST00000518542 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
CSGALNACT1-206ENST00000518542 TRPC5Q9UL62 973 aaPredicted RBP10.42□□□□□ -0.74
CSGALNACT1-206ENST00000518542 RTL1A6NKG5 1358 aa10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 KIF24Q5T7B8 1368 aa10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 MAP3K19Q56UN5 1328 aa10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 PPM1GO15355 546 aaPredicted RBP10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 IP6K1Q92551 441 aa10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 NRAPQ86VF7 1730 aa10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 CAMTA1Q9Y6Y1 1673 aa10.41□□□□□ -0.74
CSGALNACT1-206ENST00000518542 GLI3P10071 1580 aa10.4□□□□□ -0.74
CSGALNACT1-206ENST00000518542 HOXC9P31274 260 aa10.4□□□□□ -0.74
CSGALNACT1-206ENST00000518542 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
CSGALNACT1-206ENST00000518542 POLKQ9UBT6 870 aa10.4□□□□□ -0.74
CSGALNACT1-206ENST00000518542 CCDC9Q9Y3X0 531 aaKnown RBP10.4□□□□□ -0.74
CSGALNACT1-206ENST00000518542 BLMP54132 1417 aaPredicted RBP10.4□□□□□ -0.75
CSGALNACT1-206ENST00000518542 FLT4P35916 1363 aa10.39□□□□□ -0.75
CSGALNACT1-206ENST00000518542 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
CSGALNACT1-206ENST00000518542 VPS72Q15906 364 aa10.39□□□□□ -0.75
CSGALNACT1-206ENST00000518542 CHRDL2Q6WN34 429 aa10.39□□□□□ -0.75
CSGALNACT1-206ENST00000518542 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
CSGALNACT1-206ENST00000518542 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
CSGALNACT1-206ENST00000518542 COL5A2P05997 1499 aaPredicted RBP10.38□□□□□ -0.75
CSGALNACT1-206ENST00000518542 LRP5O75197 1615 aa10.38□□□□□ -0.75
CSGALNACT1-206ENST00000518542 RALBP1Q15311 655 aa10.38□□□□□ -0.75
CSGALNACT1-206ENST00000518542 SMG6Q86US8 1419 aaKnown RBP10.38□□□□□ -0.75
CSGALNACT1-206ENST00000518542 PEAK1Q9H792 1746 aa10.38□□□□□ -0.75
CSGALNACT1-206ENST00000518542 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
CSGALNACT1-206ENST00000518542 WDR17Q8IZU2 1322 aa10.37□□□□□ -0.75
CSGALNACT1-206ENST00000518542 MTHFSP49914 203 aa10.37□□□□□ -0.75
CSGALNACT1-206ENST00000518542 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
CSGALNACT1-206ENST00000518542 TOM1L2Q6ZVM7 507 aa10.37□□□□□ -0.75
CSGALNACT1-206ENST00000518542 ANKRD24Q8TF21 1146 aa10.37□□□□□ -0.75
CSGALNACT1-206ENST00000518542 LTV1Q96GA3 475 aaPredicted RBP10.37□□□□□ -0.75
CSGALNACT1-206ENST00000518542 GJD4Q96KN9 370 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms