RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 COL18A1P39060 1754 aa17.03■□□□□ 0.32
TMEM55A-202ENST00000518359 BCL9O00512 1426 aa17.03■□□□□ 0.32
TMEM55A-202ENST00000518359 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
TMEM55A-202ENST00000518359 NLRP6P59044 892 aa17.02■□□□□ 0.32
TMEM55A-202ENST00000518359 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
TMEM55A-202ENST00000518359 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
TMEM55A-202ENST00000518359 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
TMEM55A-202ENST00000518359 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
TMEM55A-202ENST00000518359 USP6P35125 1406 aa17.01■□□□□ 0.31
TMEM55A-202ENST00000518359 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
TMEM55A-202ENST00000518359 UTRNP46939 3433 aa16.99■□□□□ 0.31
TMEM55A-202ENST00000518359 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
TMEM55A-202ENST00000518359 PTGER2P43116 358 aa16.99■□□□□ 0.31
TMEM55A-202ENST00000518359 PDGFDQ9GZP0 370 aaPredicted RBP16.99■□□□□ 0.31
TMEM55A-202ENST00000518359 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
TMEM55A-202ENST00000518359 CPSF1Q10570 1443 aaKnown RBP16.98■□□□□ 0.31
TMEM55A-202ENST00000518359 TXNRD1Q16881 649 aa16.98■□□□□ 0.31
TMEM55A-202ENST00000518359 PROM2Q8N271 834 aa16.98■□□□□ 0.31
TMEM55A-202ENST00000518359 MARCH10Q8NA82 808 aaPredicted RBP16.98■□□□□ 0.31
TMEM55A-202ENST00000518359 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
TMEM55A-202ENST00000518359 SLC15A2Q16348 729 aa16.97■□□□□ 0.31
TMEM55A-202ENST00000518359 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
TMEM55A-202ENST00000518359 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
TMEM55A-202ENST00000518359 FHDC1Q9C0D6 1143 aaPredicted RBP16.97■□□□□ 0.31
TMEM55A-202ENST00000518359 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
TMEM55A-202ENST00000518359 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
TMEM55A-202ENST00000518359 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
TMEM55A-202ENST00000518359 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
TMEM55A-202ENST00000518359 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
TMEM55A-202ENST00000518359 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
TMEM55A-202ENST00000518359 TRPM1Q7Z4N2 1603 aa16.95■□□□□ 0.3
TMEM55A-202ENST00000518359 EXOC5O00471 708 aa16.94■□□□□ 0.3
TMEM55A-202ENST00000518359 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
TMEM55A-202ENST00000518359 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
TMEM55A-202ENST00000518359 CCDC7Q96M83 1385 aa16.93■□□□□ 0.3
TMEM55A-202ENST00000518359 ABCC6O95255 1503 aa16.93■□□□□ 0.3
TMEM55A-202ENST00000518359 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
TMEM55A-202ENST00000518359 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
TMEM55A-202ENST00000518359 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
TMEM55A-202ENST00000518359 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
TMEM55A-202ENST00000518359 ARXQ96QS3 562 aa16.91■□□□□ 0.3
TMEM55A-202ENST00000518359 PAPPAQ13219 1627 aa16.91■□□□□ 0.3
TMEM55A-202ENST00000518359 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
TMEM55A-202ENST00000518359 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
TMEM55A-202ENST00000518359 SGIP1Q9BQI5 828 aa16.9■□□□□ 0.3
TMEM55A-202ENST00000518359 BTAF1O14981 1849 aa16.9■□□□□ 0.3
TMEM55A-202ENST00000518359 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
TMEM55A-202ENST00000518359 EVC2Q86UK5 1308 aa16.89■□□□□ 0.29
TMEM55A-202ENST00000518359 QSER1Q2KHR3 1735 aa16.88■□□□□ 0.29
TMEM55A-202ENST00000518359 NFAT5O94916 1531 aa16.88■□□□□ 0.29
TMEM55A-202ENST00000518359 SOX12O15370 315 aa16.88■□□□□ 0.29
TMEM55A-202ENST00000518359 TTC21AQ8NDW8 1320 aa16.88■□□□□ 0.29
TMEM55A-202ENST00000518359 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
TMEM55A-202ENST00000518359 LTN1O94822 1766 aa16.86■□□□□ 0.29
TMEM55A-202ENST00000518359 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
TMEM55A-202ENST00000518359 GPR162Q16538 588 aa16.85■□□□□ 0.29
TMEM55A-202ENST00000518359 ACSBG1Q96GR2 724 aa16.84■□□□□ 0.29
TMEM55A-202ENST00000518359 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
TMEM55A-202ENST00000518359 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
TMEM55A-202ENST00000518359 COL24A1Q17RW2 1714 aa16.83■□□□□ 0.28
TMEM55A-202ENST00000518359 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
TMEM55A-202ENST00000518359 SLC16A10Q8TF71 515 aa16.82■□□□□ 0.28
TMEM55A-202ENST00000518359 ERBB3P21860 1342 aa16.81■□□□□ 0.28
TMEM55A-202ENST00000518359 IL2RBP14784 551 aa16.81■□□□□ 0.28
TMEM55A-202ENST00000518359 POLD1P28340 1107 aa16.81■□□□□ 0.28
TMEM55A-202ENST00000518359 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
TMEM55A-202ENST00000518359 ZNF827Q17R98 1081 aa16.8■□□□□ 0.28
TMEM55A-202ENST00000518359 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
TMEM55A-202ENST00000518359 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
TMEM55A-202ENST00000518359 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
TMEM55A-202ENST00000518359 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
TMEM55A-202ENST00000518359 SLC27A3Q5K4L6 730 aa16.78■□□□□ 0.28
TMEM55A-202ENST00000518359 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
TMEM55A-202ENST00000518359 IFFO2Q5TF58 517 aa16.77■□□□□ 0.28
TMEM55A-202ENST00000518359 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
TMEM55A-202ENST00000518359 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
TMEM55A-202ENST00000518359 CEP350Q5VT06 3117 aa16.76■□□□□ 0.27
TMEM55A-202ENST00000518359 LRRC4BQ9NT99 713 aa16.76■□□□□ 0.27
TMEM55A-202ENST00000518359 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
TMEM55A-202ENST00000518359 LY75O60449 1722 aa16.75■□□□□ 0.27
TMEM55A-202ENST00000518359 DOT1LQ8TEK3 1739 aa16.74■□□□□ 0.27
TMEM55A-202ENST00000518359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
TMEM55A-202ENST00000518359 ANKRD24Q8TF21 1146 aa16.74■□□□□ 0.27
TMEM55A-202ENST00000518359 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
TMEM55A-202ENST00000518359 ROCK2O75116 1388 aaKnown RBP16.74■□□□□ 0.27
TMEM55A-202ENST00000518359 PNPLA7Q6ZV29 1317 aa16.72■□□□□ 0.27
TMEM55A-202ENST00000518359 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
TMEM55A-202ENST00000518359 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
TMEM55A-202ENST00000518359 NME9Q86XW9 330 aa16.7■□□□□ 0.26
TMEM55A-202ENST00000518359 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
TMEM55A-202ENST00000518359 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
TMEM55A-202ENST00000518359 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
TMEM55A-202ENST00000518359 NLGN2Q8NFZ4 835 aa16.69■□□□□ 0.26
TMEM55A-202ENST00000518359 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
TMEM55A-202ENST00000518359 ANKRD36BQ8N2N9 1353 aa16.68■□□□□ 0.26
TMEM55A-202ENST00000518359 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
TMEM55A-202ENST00000518359 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
TMEM55A-202ENST00000518359 MSH5O43196 834 aa16.66■□□□□ 0.26
TMEM55A-202ENST00000518359 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
TMEM55A-202ENST00000518359 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms