RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
LINCR-0001-201ENST00000517732 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
LINCR-0001-201ENST00000517732 SLIT3O75094 1523 aa13.16□□□□□ -0.3
LINCR-0001-201ENST00000517732 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
LINCR-0001-201ENST00000517732 COL18A1P39060 1754 aa13.15□□□□□ -0.3
LINCR-0001-201ENST00000517732 NLRP6P59044 892 aa13.15□□□□□ -0.3
LINCR-0001-201ENST00000517732 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
LINCR-0001-201ENST00000517732 USP6P35125 1406 aa13.14□□□□□ -0.31
LINCR-0001-201ENST00000517732 STK32BQ9NY57 414 aa13.14□□□□□ -0.31
LINCR-0001-201ENST00000517732 PIK3C2AO00443 1686 aa13.14□□□□□ -0.31
LINCR-0001-201ENST00000517732 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
LINCR-0001-201ENST00000517732 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
LINCR-0001-201ENST00000517732 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
LINCR-0001-201ENST00000517732 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
LINCR-0001-201ENST00000517732 BCL9O00512 1426 aa13.12□□□□□ -0.31
LINCR-0001-201ENST00000517732 CPSF1Q10570 1443 aaKnown RBP13.12□□□□□ -0.31
LINCR-0001-201ENST00000517732 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
LINCR-0001-201ENST00000517732 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
LINCR-0001-201ENST00000517732 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
LINCR-0001-201ENST00000517732 KCNH5Q8NCM2 988 aa13.1□□□□□ -0.31
LINCR-0001-201ENST00000517732 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
LINCR-0001-201ENST00000517732 EXOC5O00471 708 aa13.09□□□□□ -0.31
LINCR-0001-201ENST00000517732 SLC15A2Q16348 729 aa13.09□□□□□ -0.31
LINCR-0001-201ENST00000517732 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
LINCR-0001-201ENST00000517732 MARCH10Q8NA82 808 aaPredicted RBP13.09□□□□□ -0.31
LINCR-0001-201ENST00000517732 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
LINCR-0001-201ENST00000517732 CCDC7Q96M83 1385 aa13.08□□□□□ -0.31
LINCR-0001-201ENST00000517732 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.32
LINCR-0001-201ENST00000517732 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
LINCR-0001-201ENST00000517732 CARD10Q9BWT7 1032 aa13.08□□□□□ -0.32
LINCR-0001-201ENST00000517732 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
LINCR-0001-201ENST00000517732 ABCC6O95255 1503 aa13.08□□□□□ -0.32
LINCR-0001-201ENST00000517732 PTGER2P43116 358 aa13.07□□□□□ -0.32
LINCR-0001-201ENST00000517732 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
LINCR-0001-201ENST00000517732 FHDC1Q9C0D6 1143 aaPredicted RBP13.07□□□□□ -0.32
LINCR-0001-201ENST00000517732 PDGFDQ9GZP0 370 aaPredicted RBP13.07□□□□□ -0.32
LINCR-0001-201ENST00000517732 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
LINCR-0001-201ENST00000517732 BTAF1O14981 1849 aa13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 SOX12O15370 315 aa13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 PROM2Q8N271 834 aa13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 SYT17Q9BSW7 474 aa13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 ZNF692Q9BU19 519 aaPredicted RBP13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 LTN1O94822 1766 aa13.06□□□□□ -0.32
LINCR-0001-201ENST00000517732 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
LINCR-0001-201ENST00000517732 PPP4R3CPQ6ZMV5 832 aa13.05□□□□□ -0.32
LINCR-0001-201ENST00000517732 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
LINCR-0001-201ENST00000517732 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
LINCR-0001-201ENST00000517732 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
LINCR-0001-201ENST00000517732 TTC21BQ7Z4L5 1316 aa13.04□□□□□ -0.32
LINCR-0001-201ENST00000517732 QSER1Q2KHR3 1735 aa13.04□□□□□ -0.32
LINCR-0001-201ENST00000517732 PAPPAQ13219 1627 aa13.03□□□□□ -0.32
LINCR-0001-201ENST00000517732 ARXQ96QS3 562 aa13.03□□□□□ -0.32
LINCR-0001-201ENST00000517732 NFAT5O94916 1531 aa13.03□□□□□ -0.32
LINCR-0001-201ENST00000517732 C1QTNF8P60827 252 aa13.01□□□□□ -0.33
LINCR-0001-201ENST00000517732 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
LINCR-0001-201ENST00000517732 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
LINCR-0001-201ENST00000517732 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
LINCR-0001-201ENST00000517732 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
LINCR-0001-201ENST00000517732 FAM208AQ9UK61 1670 aaKnown RBP13□□□□□ -0.33
LINCR-0001-201ENST00000517732 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
LINCR-0001-201ENST00000517732 GPR162Q16538 588 aa13□□□□□ -0.33
LINCR-0001-201ENST00000517732 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
LINCR-0001-201ENST00000517732 IL2RBP14784 551 aa12.99□□□□□ -0.33
LINCR-0001-201ENST00000517732 POLD1P28340 1107 aa12.99□□□□□ -0.33
LINCR-0001-201ENST00000517732 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
LINCR-0001-201ENST00000517732 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
LINCR-0001-201ENST00000517732 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
LINCR-0001-201ENST00000517732 COL24A1Q17RW2 1714 aa12.98□□□□□ -0.33
LINCR-0001-201ENST00000517732 ERBB3P21860 1342 aa12.97□□□□□ -0.33
LINCR-0001-201ENST00000517732 GIGYF1O75420 1035 aaPredicted RBP12.97□□□□□ -0.33
LINCR-0001-201ENST00000517732 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
LINCR-0001-201ENST00000517732 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
LINCR-0001-201ENST00000517732 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
LINCR-0001-201ENST00000517732 SLC27A3Q5K4L6 730 aa12.95□□□□□ -0.34
LINCR-0001-201ENST00000517732 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
LINCR-0001-201ENST00000517732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINCR-0001-201ENST00000517732 DOT1LQ8TEK3 1739 aa12.95□□□□□ -0.34
LINCR-0001-201ENST00000517732 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
LINCR-0001-201ENST00000517732 LY75O60449 1722 aa12.94□□□□□ -0.34
LINCR-0001-201ENST00000517732 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
LINCR-0001-201ENST00000517732 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
LINCR-0001-201ENST00000517732 L3MBTL2Q969R5 705 aa12.93□□□□□ -0.34
LINCR-0001-201ENST00000517732 HDGFL2Q7Z4V5 671 aaPredicted RBP12.92□□□□□ -0.34
LINCR-0001-201ENST00000517732 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
LINCR-0001-201ENST00000517732 NME9Q86XW9 330 aa12.91□□□□□ -0.34
LINCR-0001-201ENST00000517732 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
LINCR-0001-201ENST00000517732 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
LINCR-0001-201ENST00000517732 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
LINCR-0001-201ENST00000517732 PNPLA7Q6ZV29 1317 aa12.9□□□□□ -0.34
LINCR-0001-201ENST00000517732 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
LINCR-0001-201ENST00000517732 DDX54Q8TDD1 881 aaKnown RBP12.9□□□□□ -0.34
LINCR-0001-201ENST00000517732 TMC1Q8TDI8 760 aa12.9□□□□□ -0.34
LINCR-0001-201ENST00000517732 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
LINCR-0001-201ENST00000517732 SBNO2Q9Y2G9 1366 aa12.9□□□□□ -0.34
LINCR-0001-201ENST00000517732 UTRNP46939 3433 aa12.9□□□□□ -0.35
LINCR-0001-201ENST00000517732 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
LINCR-0001-201ENST00000517732 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
LINCR-0001-201ENST00000517732 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms