RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 NRAPQ86VF7 1730 aa21.51■■□□□ 1.03
C8orf88-201ENST00000517562 ATRNO75882 1429 aa21.5■■□□□ 1.03
C8orf88-201ENST00000517562 DDX10Q13206 875 aaKnown RBP21.5■■□□□ 1.03
C8orf88-201ENST00000517562 LARP1Q6PKG0 1096 aaKnown RBP21.5■■□□□ 1.03
C8orf88-201ENST00000517562 MAP3K19Q56UN5 1328 aa21.5■■□□□ 1.03
C8orf88-201ENST00000517562 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
C8orf88-201ENST00000517562 GJD4Q96KN9 370 aaPredicted RBP21.49■■□□□ 1.03
C8orf88-201ENST00000517562 USP35Q9P2H5 1018 aa21.49■■□□□ 1.03
C8orf88-201ENST00000517562 LMO7Q8WWI1 1683 aa21.49■■□□□ 1.03
C8orf88-201ENST00000517562 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
C8orf88-201ENST00000517562 RBM6P78332 1123 aaKnown RBP21.48■■□□□ 1.03
C8orf88-201ENST00000517562 VPS72Q15906 364 aa21.48■■□□□ 1.03
C8orf88-201ENST00000517562 AMER1Q5JTC6 1135 aaPredicted RBP21.48■■□□□ 1.03
C8orf88-201ENST00000517562 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.47■■□□□ 1.03
C8orf88-201ENST00000517562 AMPHP49418 695 aa21.47■■□□□ 1.03
C8orf88-201ENST00000517562 MORC1Q86VD1 984 aa21.47■■□□□ 1.03
C8orf88-201ENST00000517562 PPM1GO15355 546 aaPredicted RBP21.46■■□□□ 1.03
C8orf88-201ENST00000517562 EMILIN1Q9Y6C2 1016 aa21.46■■□□□ 1.03
C8orf88-201ENST00000517562 ANKRD26Q9UPS8 1709 aa21.46■■□□□ 1.03
C8orf88-201ENST00000517562 CSB-PGBD3P0DP91 1061 aa21.44■■□□□ 1.02
C8orf88-201ENST00000517562 IP6K1Q92551 441 aa21.44■■□□□ 1.02
C8orf88-201ENST00000517562 GLI3P10071 1580 aa21.44■■□□□ 1.02
C8orf88-201ENST00000517562 FAM98CQ17RN3 349 aaKnown RBP21.43■■□□□ 1.02
C8orf88-201ENST00000517562 SPATA31A5Q5VU36 1347 aa21.43■■□□□ 1.02
C8orf88-201ENST00000517562 SPATA31A7Q8IWB4 1347 aa21.43■■□□□ 1.02
C8orf88-201ENST00000517562 COL5A2P05997 1499 aaPredicted RBP21.42■■□□□ 1.02
C8orf88-201ENST00000517562 HOXC9P31274 260 aa21.42■■□□□ 1.02
C8orf88-201ENST00000517562 TOM1L2Q6ZVM7 507 aa21.42■■□□□ 1.02
C8orf88-201ENST00000517562 RGPD2P0DJD1 1756 aa21.41■■□□□ 1.02
C8orf88-201ENST00000517562 PEAK1Q9H792 1746 aa21.41■■□□□ 1.02
C8orf88-201ENST00000517562 HSP90AB2PQ58FF8 381 aa21.41■■□□□ 1.02
C8orf88-201ENST00000517562 ANKRD24Q8TF21 1146 aa21.41■■□□□ 1.02
C8orf88-201ENST00000517562 POLKQ9UBT6 870 aa21.41■■□□□ 1.02
C8orf88-201ENST00000517562 SPATA31A1Q5TZJ5 1347 aa21.4■■□□□ 1.02
C8orf88-201ENST00000517562 A0A0G2JS52 829 aa21.4■■□□□ 1.02
C8orf88-201ENST00000517562 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
C8orf88-201ENST00000517562 MYT1Q01538 1121 aa21.4■■□□□ 1.02
C8orf88-201ENST00000517562 NLRP2Q9NX02 1062 aa21.38■■□□□ 1.01
C8orf88-201ENST00000517562 BRWD3Q6RI45 1802 aa21.38■■□□□ 1.01
C8orf88-201ENST00000517562 WDR17Q8IZU2 1322 aa21.37■■□□□ 1.01
C8orf88-201ENST00000517562 SEPT12Q8IYM1 358 aa21.37■■□□□ 1.01
C8orf88-201ENST00000517562 RGS12O14924 1447 aa21.37■■□□□ 1.01
C8orf88-201ENST00000517562 NSD2O96028 1365 aa21.36■■□□□ 1.01
C8orf88-201ENST00000517562 ERBB3P21860 1342 aa21.34■■□□□ 1.01
C8orf88-201ENST00000517562 TCP11L2Q8N4U5 519 aa21.34■■□□□ 1.01
C8orf88-201ENST00000517562 CRB1P82279 1406 aa21.34■■□□□ 1.01
C8orf88-201ENST00000517562 USHBP1Q8N6Y0 703 aa21.33■■□□□ 1.01
C8orf88-201ENST00000517562 ONECUT3O60422 494 aaPredicted RBP21.32■■□□□ 1
C8orf88-201ENST00000517562 FAM182BQ5T319 152 aa21.32■■□□□ 1
C8orf88-201ENST00000517562 CARD10Q9BWT7 1032 aa21.32■■□□□ 1
C8orf88-201ENST00000517562 MTHFSP49914 203 aa21.31■■□□□ 1
C8orf88-201ENST00000517562 NBPF6Q5VWK0 638 aa21.31■■□□□ 1
C8orf88-201ENST00000517562 NBPF4Q96M43 638 aa21.31■■□□□ 1
C8orf88-201ENST00000517562 FLT4P35916 1363 aa21.31■■□□□ 1
C8orf88-201ENST00000517562 BLMP54132 1417 aaPredicted RBP21.3■■□□□ 1
C8orf88-201ENST00000517562 INSRP06213 1382 aa21.3■■□□□ 1
C8orf88-201ENST00000517562 ABCC6O95255 1503 aa21.29■■□□□ 1
C8orf88-201ENST00000517562 CDK12Q9NYV4 1490 aaPredicted RBP21.28■■□□□ 1
C8orf88-201ENST00000517562 RTL1A6NKG5 1358 aa21.28■■□□□ 1
C8orf88-201ENST00000517562 NPC1L1Q9UHC9 1359 aa21.28■■□□□ 1
C8orf88-201ENST00000517562 BARGINQ6ZT62 677 aa21.28■■□□□ 1
C8orf88-201ENST00000517562 EIF4A2Q14240 407 aaKnown RBP21.27■■□□□ 1
C8orf88-201ENST00000517562 KAT6BQ8WYB5 2073 aa21.27■□□□□ 0.99
C8orf88-201ENST00000517562 THRAP3Q9Y2W1 955 aaKnown RBP21.26■□□□□ 0.99
C8orf88-201ENST00000517562 KRT27Q7Z3Y8 459 aa21.25■□□□□ 0.99
C8orf88-201ENST00000517562 EYA1Q99502 592 aa21.25■□□□□ 0.99
C8orf88-201ENST00000517562 PPP2R1AP30153 589 aa21.24■□□□□ 0.99
C8orf88-201ENST00000517562 THSD7AQ9UPZ6 1657 aa21.24■□□□□ 0.99
C8orf88-201ENST00000517562 WNK3Q9BYP7 1800 aa21.23■□□□□ 0.99
C8orf88-201ENST00000517562 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
C8orf88-201ENST00000517562 PDE3BQ13370 1112 aa21.21■□□□□ 0.99
C8orf88-201ENST00000517562 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
C8orf88-201ENST00000517562 IL2RBP14784 551 aa21.2■□□□□ 0.98
C8orf88-201ENST00000517562 DDB1Q16531 1140 aa21.2■□□□□ 0.98
C8orf88-201ENST00000517562 FAM208AQ9UK61 1670 aaKnown RBP21.2■□□□□ 0.98
C8orf88-201ENST00000517562 SOCS7O14512 581 aa21.19■□□□□ 0.98
C8orf88-201ENST00000517562 IL13P35225 146 aa21.19■□□□□ 0.98
C8orf88-201ENST00000517562 EXOC5O00471 708 aa21.18■□□□□ 0.98
C8orf88-201ENST00000517562 DISP2A7MBM2 1401 aa21.18■□□□□ 0.98
C8orf88-201ENST00000517562 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
C8orf88-201ENST00000517562 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
C8orf88-201ENST00000517562 MARCH10Q8NA82 808 aaPredicted RBP21.17■□□□□ 0.98
C8orf88-201ENST00000517562 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
C8orf88-201ENST00000517562 DDX54Q8TDD1 881 aaKnown RBP21.16■□□□□ 0.98
C8orf88-201ENST00000517562 LRRC37A3O60309 1634 aa21.15■□□□□ 0.98
C8orf88-201ENST00000517562 MEGF6O75095 1541 aa21.15■□□□□ 0.98
C8orf88-201ENST00000517562 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
C8orf88-201ENST00000517562 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
C8orf88-201ENST00000517562 HMOX1P09601 288 aa21.14■□□□□ 0.97
C8orf88-201ENST00000517562 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.97
C8orf88-201ENST00000517562 CDCA7Q9BWT1 371 aaPredicted RBP21.14■□□□□ 0.97
C8orf88-201ENST00000517562 U2SURPO15042 1029 aaKnown RBP21.13■□□□□ 0.97
C8orf88-201ENST00000517562 TATP17735 454 aaPredicted RBP21.13■□□□□ 0.97
C8orf88-201ENST00000517562 SULT6B1Q6IMI4 303 aa21.13■□□□□ 0.97
C8orf88-201ENST00000517562 RALBP1Q15311 655 aa21.12■□□□□ 0.97
C8orf88-201ENST00000517562 ZCRB1Q8TBF4 217 aaKnown RBP21.12■□□□□ 0.97
C8orf88-201ENST00000517562 IGSF1Q8N6C5 1336 aa21.1■□□□□ 0.97
C8orf88-201ENST00000517562 COL3A1P02461 1466 aaPredicted RBP21.1■□□□□ 0.97
C8orf88-201ENST00000517562 TRIM37O94972 964 aa21.1■□□□□ 0.97
C8orf88-201ENST00000517562 PTF1AQ7RTS3 328 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms