RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 HDAC5Q9UQL6 1122 aa8.06□□□□□ -1.12
CPNE3-203ENST00000517490 ZBTB40Q9NUA8 1239 aa8.06□□□□□ -1.12
CPNE3-203ENST00000517490 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.06□□□□□ -1.12
CPNE3-203ENST00000517490 ZNF771Q7L3S4 317 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-203ENST00000517490 RUFY2Q8WXA3 655 aa8.05□□□□□ -1.12
CPNE3-203ENST00000517490 SYNMO15061 1565 aa8.05□□□□□ -1.12
CPNE3-203ENST00000517490 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
CPNE3-203ENST00000517490 WDR7Q9Y4E6 1490 aa8.05□□□□□ -1.12
CPNE3-203ENST00000517490 LRSAM1Q6UWE0 723 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 AEBP1Q8IUX7 1158 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 ZKSCAN5Q9Y2L8 839 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 LRRIQ1Q96JM4 1722 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 GAS2L2Q8NHY3 880 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 PUS7Q96PZ0 661 aaKnown RBP8.04□□□□□ -1.12
CPNE3-203ENST00000517490 C14orf93Q9H972 538 aaKnown RBP8.04□□□□□ -1.12
CPNE3-203ENST00000517490 KIF3AQ9Y496 699 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 UHRF1BP1LA0JNW5 1464 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 MAST1Q9Y2H9 1570 aa8.04□□□□□ -1.12
CPNE3-203ENST00000517490 ABCC10Q5T3U5 1492 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 ANKRD36BQ8N2N9 1353 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 GOLGA6L19H0YKK7 550 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 SOX12O15370 315 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 GNAI3P08754 354 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 TTC22Q5TAA0 569 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 CLASP1Q7Z460 1538 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 ZKSCAN1P17029 563 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-203ENST00000517490 ZNF445P59923 1031 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 TPM4P67936 248 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 ZNF526Q8TF50 670 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-203ENST00000517490 PPP1R9BQ96SB3 815 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 NOL7Q9UMY1 257 aaKnown RBP8.03□□□□□ -1.12
CPNE3-203ENST00000517490 TRPM1Q7Z4N2 1603 aa8.03□□□□□ -1.12
CPNE3-203ENST00000517490 UVSSAQ2YD98 709 aa8.02□□□□□ -1.12
CPNE3-203ENST00000517490 PRIMPOLQ96LW4 560 aa8.02□□□□□ -1.12
CPNE3-203ENST00000517490 CCT4P50991 539 aaKnown RBP8.02□□□□□ -1.13
CPNE3-203ENST00000517490 NOS1P29475 1434 aa8.02□□□□□ -1.13
CPNE3-203ENST00000517490 GNAI2P04899 355 aa8.02□□□□□ -1.13
CPNE3-203ENST00000517490 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
CPNE3-203ENST00000517490 VPS37CA5D8V6 355 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 PRAM1Q96QH2 718 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 RBM42Q9BTD8 480 aaKnown RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 PLCH2O75038 1416 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 CCDC192P0DO97 292 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 FKBP5Q13451 457 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 CCDC183Q5T5S1 534 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 LRRCC1Q9C099 1032 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 RBM27Q9P2N5 1060 aaKnown RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 BECN2A8MW95 431 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 HSP90AB4PQ58FF6 505 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 KDM5AP29375 1690 aaKnown RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 A0A0U1RQG5 324 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 TSPYL4Q9UJ04 414 aa8.01□□□□□ -1.13
CPNE3-203ENST00000517490 NAP1L2Q9ULW6 460 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-203ENST00000517490 FIBPO43427 364 aa8□□□□□ -1.13
CPNE3-203ENST00000517490 PDCL2Q8N4E4 241 aa8□□□□□ -1.13
CPNE3-203ENST00000517490 ZNF592Q92610 1267 aa8□□□□□ -1.13
CPNE3-203ENST00000517490 CDK19Q9BWU1 502 aa8□□□□□ -1.13
CPNE3-203ENST00000517490 CABP1Q9NZU7 370 aa8□□□□□ -1.13
CPNE3-203ENST00000517490 CNTROBQ8N137 903 aa8□□□□□ -1.13
CPNE3-203ENST00000517490 MRPL50Q8N5N7 158 aaKnown RBP8□□□□□ -1.13
CPNE3-203ENST00000517490 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 H3BQV1 296 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 SLC4A2P04920 1241 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 IFFO2Q5TF58 517 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 CROCC2H7BZ55 1655 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 ADCY10Q96PN6 1610 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 PDCP20941 246 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 RNF20Q5VTR2 975 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 GAS2L3Q86XJ1 694 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 BICD2Q8TD16 824 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 THUMPD2Q9BTF0 503 aaKnown RBP7.99□□□□□ -1.13
CPNE3-203ENST00000517490 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-203ENST00000517490 MPNDQ8N594 471 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 CHMP3Q9Y3E7 222 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 PLA2R1Q13018 1463 aa7.99□□□□□ -1.13
CPNE3-203ENST00000517490 UBTFL1P0CB47 393 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-203ENST00000517490 CHMP4CQ96CF2 233 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 TRIM5Q9C035 493 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 RBSNQ9H1K0 784 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 SLC52A1Q9NWF4 448 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 LAMC1P11047 1609 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 CCDC66A2RUB6 948 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 AMPHP49418 695 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 TAF3Q5VWG9 929 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 SMAP1Q8IYB5 467 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-203ENST00000517490 SBNO2Q9Y2G9 1366 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 ATP10AO60312 1499 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 RTEL1-TNFRSF6BF6WH68 1400 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 ZBTB7BO15156 539 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-203ENST00000517490 SMARCA5O60264 1052 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-203ENST00000517490 ZNF500O60304 480 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-203ENST00000517490 SDSP20132 328 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 TPD52L1Q16890 204 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-203ENST00000517490 SPC24Q8NBT2 197 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 PTPRTO14522 1441 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 TMX3Q96JJ7 454 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 DCTPP1Q9H773 170 aa7.98□□□□□ -1.13
CPNE3-203ENST00000517490 USP25Q9UHP3 1055 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms