RNA–Protein interactions for RNA: ENST00000516942.1

RNU6-143P-201, Transcript of RNA, U6 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU6-143P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-143P-201ENST00000516942 CCDC85AQ96PX6 553 aaPredicted RBP5.56□□□□□ -1.52
RNU6-143P-201ENST00000516942 SLAIN2Q9P270 581 aa5.56□□□□□ -1.52
RNU6-143P-201ENST00000516942 MKRN1Q9UHC7 482 aaKnown RBP5.56□□□□□ -1.52
RNU6-143P-201ENST00000516942 FCF1Q9Y324 198 aaKnown RBP5.56□□□□□ -1.52
RNU6-143P-201ENST00000516942 GIGYF1O75420 1035 aaPredicted RBP5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 NCOA4Q13772 614 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 SLFNL1Q499Z3 407 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 PLA2G2CQ5R387 149 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 TMEM164Q5U3C3 297 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 ZBTB33Q86T24 672 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 BPHLQ86WA6 291 aaPredicted RBP5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 RNF135Q8IUD6 432 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 AEBP1Q8IUX7 1158 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 CCDC24Q8N4L8 307 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 PCDHB9Q9Y5E1 797 aa5.55□□□□□ -1.52
RNU6-143P-201ENST00000516942 RNF223E7ERA6 249 aa5.54□□□□□ -1.52
RNU6-143P-201ENST00000516942 ATP5J2-PTCD1G3V325 749 aa5.54□□□□□ -1.52
RNU6-143P-201ENST00000516942 CLDN10P78369 228 aa5.54□□□□□ -1.52
RNU6-143P-201ENST00000516942 DEPDC4Q8N2C3 294 aa5.54□□□□□ -1.52
RNU6-143P-201ENST00000516942 STK32AQ8WU08 396 aa5.54□□□□□ -1.52
RNU6-143P-201ENST00000516942 GNEQ9Y223 722 aaKnown RBP5.54□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L15C9J2P7 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 PATL2C9JE40 543 aaKnown RBP5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L10C9JJH3 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L13C9JLJ4 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L12C9JPN9 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L11C9JVI0 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L21D6R901 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L18D6R9N7 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L22D6RA61 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L17D6RBQ6 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L19D6RCP7 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L20D6RJB6 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 PPEF1O14829 653 aaPredicted RBP5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 SKOR1P84550 965 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 KCNC4Q03721 635 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 USP17L24Q0WX57 530 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 TXNDC2Q86VQ3 553 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 DZIP3Q86Y13 1208 aaKnown RBP5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 CCDC125Q86Z20 511 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 SEPT12Q8IYM1 358 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 ANKLE1Q8NAG6 615 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 CDCA7Q9BWT1 371 aaPredicted RBP5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 PCDH10Q9P2E7 1040 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 HCSTQ9UBK5 93 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 NOVA2Q9UNW9 492 aaKnown RBP5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 PCDHGA11Q9Y5H2 935 aa5.53□□□□□ -1.52
RNU6-143P-201ENST00000516942 SSFA2P28290 1259 aa5.52□□□□□ -1.53
RNU6-143P-201ENST00000516942 ANKMY2Q8IV38 441 aa5.52□□□□□ -1.53
RNU6-143P-201ENST00000516942 SIX5Q8N196 739 aa5.52□□□□□ -1.53
RNU6-143P-201ENST00000516942 CLP1Q92989 425 aaKnown RBP5.52□□□□□ -1.53
RNU6-143P-201ENST00000516942 EMID1Q96A84 441 aaPredicted RBP5.52□□□□□ -1.53
RNU6-143P-201ENST00000516942 GZF1Q9H116 711 aaPredicted RBP5.52□□□□□ -1.53
RNU6-143P-201ENST00000516942 RASA1P20936 1047 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 RPIAP49247 311 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 WNT7BP56706 349 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 LINC01559Q495D7 138 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 RNF20Q5VTR2 975 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 SPNS2Q8IVW8 549 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 LARGE2Q8N3Y3 721 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 OGFOD1Q8N543 542 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 MPNDQ8N594 471 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 CDK15Q96Q40 435 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 CDV3Q9UKY7 258 aaKnown RBP5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 KIAA1024Q9UPX6 916 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 MAP4K5Q9Y4K4 846 aa5.51□□□□□ -1.53
RNU6-143P-201ENST00000516942 MAGEB6P1A0A0J9YX57 407 aa5.5□□□□□ -1.53
RNU6-143P-201ENST00000516942 SIAH2O43255 324 aa5.5□□□□□ -1.53
RNU6-143P-201ENST00000516942 TRIM32Q13049 653 aa5.5□□□□□ -1.53
RNU6-143P-201ENST00000516942 SWI5Q1ZZU3 235 aa5.5□□□□□ -1.53
RNU6-143P-201ENST00000516942 EML3Q32P44 896 aa5.5□□□□□ -1.53
RNU6-143P-201ENST00000516942 IFFO2Q5TF58 517 aa5.5□□□□□ -1.53
RNU6-143P-201ENST00000516942 CCDC9Q9Y3X0 531 aaKnown RBP5.5□□□□□ -1.53
RNU6-143P-201ENST00000516942 VARSP26640 1264 aaKnown RBP5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 GRM5P41594 1212 aa5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 PPP1R18Q6NYC8 613 aa5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 LARP1Q6PKG0 1096 aaKnown RBP5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 TRIM50Q86XT4 487 aa5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 C1orf216Q8TAB5 229 aa5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 FAM200AQ8TCP9 573 aa5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 CARD14Q9BXL6 1004 aa5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 DNAAF2Q9NVR5 837 aaKnown RBP5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 NOD1Q9Y239 953 aa5.49□□□□□ -1.53
RNU6-143P-201ENST00000516942 ATP1A2P50993 1020 aa5.48□□□□□ -1.53
RNU6-143P-201ENST00000516942 DPYDQ12882 1025 aa5.48□□□□□ -1.53
RNU6-143P-201ENST00000516942 OCLNQ16625 522 aa5.48□□□□□ -1.53
RNU6-143P-201ENST00000516942 NBPF20Q3BBV1 942 aa5.48□□□□□ -1.53
RNU6-143P-201ENST00000516942 KCTD15Q96SI1 283 aaPredicted RBP5.48□□□□□ -1.53
RNU6-143P-201ENST00000516942 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.48□□□□□ -1.53
RNU6-143P-201ENST00000516942 DOLKQ9UPQ8 538 aa5.48□□□□□ -1.53
RNU6-143P-201ENST00000516942 M0R2N6 131 aa5.47□□□□□ -1.53
RNU6-143P-201ENST00000516942 USP4Q13107 963 aa5.47□□□□□ -1.53
RNU6-143P-201ENST00000516942 LIAT1Q6ZQX7 453 aa5.47□□□□□ -1.53
RNU6-143P-201ENST00000516942 TAS1R3Q7RTX0 852 aa5.47□□□□□ -1.53
RNU6-143P-201ENST00000516942 RNF166Q96A37 237 aaPredicted RBP5.47□□□□□ -1.53
RNU6-143P-201ENST00000516942 SLC10A4Q96EP9 437 aa5.47□□□□□ -1.53
RNU6-143P-201ENST00000516942 IVNS1ABPQ9Y6Y0 642 aa5.47□□□□□ -1.53
RNU6-143P-201ENST00000516942 ERVK-9P63128 1117 aa5.46□□□□□ -1.54
RNU6-143P-201ENST00000516942 GTF2IP78347 998 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms