RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 NLRP6P59044 892 aa11.29□□□□□ -0.6
GPN1-210ENST00000515877 CABP1Q9NZU7 370 aa11.29□□□□□ -0.6
GPN1-210ENST00000515877 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
GPN1-210ENST00000515877 CHD2O14647 1828 aaKnown RBP11.29□□□□□ -0.6
GPN1-210ENST00000515877 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
GPN1-210ENST00000515877 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
GPN1-210ENST00000515877 EDC4Q6P2E9 1401 aaKnown RBP11.28□□□□□ -0.6
GPN1-210ENST00000515877 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.6
GPN1-210ENST00000515877 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.6
GPN1-210ENST00000515877 NUDT16Q96DE0 195 aaKnown RBP11.27□□□□□ -0.6
GPN1-210ENST00000515877 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.6
GPN1-210ENST00000515877 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.6
GPN1-210ENST00000515877 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.6
GPN1-210ENST00000515877 ANKLE2Q86XL3 938 aa11.27□□□□□ -0.61
GPN1-210ENST00000515877 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
GPN1-210ENST00000515877 FYB1O15117 783 aa11.26□□□□□ -0.61
GPN1-210ENST00000515877 PDE4AP27815 886 aa11.26□□□□□ -0.61
GPN1-210ENST00000515877 C1orf115Q9H7X2 142 aa11.26□□□□□ -0.61
GPN1-210ENST00000515877 AMOTL2Q9Y2J4 779 aa11.26□□□□□ -0.61
GPN1-210ENST00000515877 MAP2P11137 1827 aaKnown RBP11.25□□□□□ -0.61
GPN1-210ENST00000515877 PDE4DQ08499 809 aa11.25□□□□□ -0.61
GPN1-210ENST00000515877 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
GPN1-210ENST00000515877 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
GPN1-210ENST00000515877 MTHFSP49914 203 aa11.24□□□□□ -0.61
GPN1-210ENST00000515877 MFSD10Q14728 455 aa11.24□□□□□ -0.61
GPN1-210ENST00000515877 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
GPN1-210ENST00000515877 NRKQ7Z2Y5 1582 aa11.24□□□□□ -0.61
GPN1-210ENST00000515877 TRIM66O15016 1216 aa11.24□□□□□ -0.61
GPN1-210ENST00000515877 GGNBP2Q9H3C7 697 aa11.24□□□□□ -0.61
GPN1-210ENST00000515877 RNF123Q5XPI4 1314 aa11.23□□□□□ -0.61
GPN1-210ENST00000515877 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
GPN1-210ENST00000515877 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
GPN1-210ENST00000515877 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
GPN1-210ENST00000515877 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
GPN1-210ENST00000515877 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
GPN1-210ENST00000515877 SOX12O15370 315 aa11.22□□□□□ -0.61
GPN1-210ENST00000515877 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
GPN1-210ENST00000515877 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
GPN1-210ENST00000515877 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.61
GPN1-210ENST00000515877 SALL2Q9Y467 1007 aaPredicted RBP11.21□□□□□ -0.61
GPN1-210ENST00000515877 ZNF521Q96K83 1311 aa11.21□□□□□ -0.61
GPN1-210ENST00000515877 PRR36Q9H6K5 1346 aa11.21□□□□□ -0.61
GPN1-210ENST00000515877 ANKARQ7Z5J8 1434 aa11.21□□□□□ -0.61
GPN1-210ENST00000515877 COL3A1P02461 1466 aaPredicted RBP11.21□□□□□ -0.61
GPN1-210ENST00000515877 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
GPN1-210ENST00000515877 NPHP4O75161 1426 aaPredicted RBP11.2□□□□□ -0.62
GPN1-210ENST00000515877 PNPLA6Q8IY17 1366 aa11.2□□□□□ -0.62
GPN1-210ENST00000515877 SENP3-EIF4A1A0A087X0R7 540 aa11.2□□□□□ -0.62
GPN1-210ENST00000515877 APBB1O00213 710 aa11.2□□□□□ -0.62
GPN1-210ENST00000515877 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
GPN1-210ENST00000515877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.62
GPN1-210ENST00000515877 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
GPN1-210ENST00000515877 NALCNQ8IZF0 1738 aa11.19□□□□□ -0.62
GPN1-210ENST00000515877 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
GPN1-210ENST00000515877 AATKQ6ZMQ8 1374 aa11.19□□□□□ -0.62
GPN1-210ENST00000515877 APAF1O14727 1248 aa11.19□□□□□ -0.62
GPN1-210ENST00000515877 CCDC146Q8IYE0 955 aa11.19□□□□□ -0.62
GPN1-210ENST00000515877 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
GPN1-210ENST00000515877 RCAN3Q9UKA8 241 aa11.19□□□□□ -0.62
GPN1-210ENST00000515877 ZBTB7CA1YPR0 619 aa11.18□□□□□ -0.62
GPN1-210ENST00000515877 COG3Q96JB2 828 aa11.18□□□□□ -0.62
GPN1-210ENST00000515877 NWD1Q149M9 1564 aa11.18□□□□□ -0.62
GPN1-210ENST00000515877 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
GPN1-210ENST00000515877 USP6P35125 1406 aa11.18□□□□□ -0.62
GPN1-210ENST00000515877 ACEP12821 1306 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 PDIA4P13667 645 aaKnown RBP11.17□□□□□ -0.62
GPN1-210ENST00000515877 KCNA6P17658 529 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 MLLT3P42568 568 aaPredicted RBP11.17□□□□□ -0.62
GPN1-210ENST00000515877 FLIIQ13045 1269 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 CAMK2BQ13554 666 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 CDK12Q9NYV4 1490 aaPredicted RBP11.17□□□□□ -0.62
GPN1-210ENST00000515877 TTC21AQ8NDW8 1320 aa11.17□□□□□ -0.62
GPN1-210ENST00000515877 DIAPH1O60610 1272 aaKnown RBP11.17□□□□□ -0.62
GPN1-210ENST00000515877 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
GPN1-210ENST00000515877 TTC21BQ7Z4L5 1316 aa11.16□□□□□ -0.62
GPN1-210ENST00000515877 E9PSI1 815 aa11.16□□□□□ -0.62
GPN1-210ENST00000515877 U2AF1L5P0DN76 240 aaPredicted RBP11.16□□□□□ -0.62
GPN1-210ENST00000515877 U2AF1Q01081 240 aaKnown RBP eCLIP11.16□□□□□ -0.62
GPN1-210ENST00000515877 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
GPN1-210ENST00000515877 CCDC27Q2M243 656 aa11.16□□□□□ -0.62
GPN1-210ENST00000515877 NME9Q86XW9 330 aa11.16□□□□□ -0.62
GPN1-210ENST00000515877 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
GPN1-210ENST00000515877 USP54Q70EL1 1684 aa11.16□□□□□ -0.62
GPN1-210ENST00000515877 IRX6P78412 446 aaPredicted RBP11.15□□□□□ -0.62
GPN1-210ENST00000515877 DUSP27Q5VZP5 1158 aa11.15□□□□□ -0.62
GPN1-210ENST00000515877 TRMT2AQ8IZ69 625 aaKnown RBP11.15□□□□□ -0.62
GPN1-210ENST00000515877 POLKQ9UBT6 870 aa11.15□□□□□ -0.62
GPN1-210ENST00000515877 SSH2Q76I76 1423 aa11.15□□□□□ -0.62
GPN1-210ENST00000515877 RRP1P56182 461 aaKnown RBP11.14□□□□□ -0.63
GPN1-210ENST00000515877 TCP11L2Q8N4U5 519 aa11.14□□□□□ -0.63
GPN1-210ENST00000515877 FAM117AQ9C073 453 aa11.14□□□□□ -0.63
GPN1-210ENST00000515877 OVOS2A0A0J9YW53 1432 aa11.14□□□□□ -0.63
GPN1-210ENST00000515877 OVOS2Q6IE36 1432 aa11.14□□□□□ -0.63
GPN1-210ENST00000515877 ADGRL3Q9HAR2 1447 aa11.14□□□□□ -0.63
GPN1-210ENST00000515877 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
GPN1-210ENST00000515877 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
GPN1-210ENST00000515877 U2SURPO15042 1029 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms