RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.98	□□□□□ -1.45
ATP2C1-223	ENST00000515854	XRN1	Q8IZH2	1706 aa	Known RBP	5.98	□□□□□ -1.45
ATP2C1-223	ENST00000515854	EDC4	Q6P2E9	1401 aa	Known RBP	5.98	□□□□□ -1.45
ATP2C1-223	ENST00000515854	CDC42BPG	Q6DT37	1551 aa		5.97	□□□□□ -1.45
ATP2C1-223	ENST00000515854	MTHFS	P49914	203 aa		5.97	□□□□□ -1.45
ATP2C1-223	ENST00000515854		Q6ZNB5	142 aa		5.97	□□□□□ -1.45
ATP2C1-223	ENST00000515854	GGNBP2	Q9H3C7	697 aa		5.97	□□□□□ -1.45
ATP2C1-223	ENST00000515854	NCKAP5L	Q9HCH0	1330 aa		5.97	□□□□□ -1.45
ATP2C1-223	ENST00000515854	ANKRD26	Q9UPS8	1709 aa		5.96	□□□□□ -1.45
ATP2C1-223	ENST00000515854	TOPAZ1	Q8N9V7	1692 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	RGS20	O76081	388 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NEFL	P07196	543 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	KCNA6	P17658	529 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	TNNT2	P45379	298 aa	Predicted RBP	5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NGEF	Q8N5V2	710 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	CFAP53	Q96M91	514 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NPHP4	O75161	1426 aa	Predicted RBP	5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	SETD1B	Q9UPS6	1966 aa	Known RBP	5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	RNF123	Q5XPI4	1314 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ZNF521	Q96K83	1311 aa		5.96	□□□□□ -1.46
ATP2C1-223	ENST00000515854	PNPLA6	Q8IY17	1366 aa		5.95	□□□□□ -1.46
ATP2C1-223	ENST00000515854	SHPRH	Q149N8	1683 aa		5.95	□□□□□ -1.46
ATP2C1-223	ENST00000515854	SENP3-EIF4A1	A0A087X0R7	540 aa		5.95	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ERICH6B	Q5W0A0	696 aa		5.95	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ANKAR	Q7Z5J8	1434 aa		5.95	□□□□□ -1.46
ATP2C1-223	ENST00000515854	HCST	Q9UBK5	93 aa		5.95	□□□□□ -1.46
ATP2C1-223	ENST00000515854	COL3A1	P02461	1466 aa	Predicted RBP	5.95	□□□□□ -1.46
ATP2C1-223	ENST00000515854	AATK	Q6ZMQ8	1374 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	MON2	Q7Z3U7	1717 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	SSH2	Q76I76	1423 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	AKAP12	Q02952	1782 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	C3orf67	Q6ZVT6	689 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	KLHL34	Q8N239	644 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	OCEL1	Q9H607	264 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	SALL2	Q9Y467	1007 aa	Predicted RBP	5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NKTR	P30414	1462 aa	Known RBP	5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	CHD2	O14647	1828 aa	Known RBP	5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	KIF20B	Q96Q89	1820 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ACE	P12821	1306 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	TTC21B	Q7Z4L5	1316 aa		5.94	□□□□□ -1.46
ATP2C1-223	ENST00000515854	USP6	P35125	1406 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	APAF1	O14727	1248 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	VARS2	Q5ST30	1063 aa	Known RBP	5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ANKRD13D	Q6ZTN6	518 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NME9	Q86XW9	330 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	CCDC146	Q8IYE0	955 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	RUNDC1	Q96C34	613 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	CDCA7L	Q96GN5	454 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	POLK	Q9UBT6	870 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NWD1	Q149M9	1564 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NRK	Q7Z2Y5	1582 aa		5.93	□□□□□ -1.46
ATP2C1-223	ENST00000515854	IQSEC2	Q5JU85	1478 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ITSN1	Q15811	1721 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	FMN2	Q9NZ56	1722 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NUTM2F	A1L443	756 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	DIAPH1	O60610	1272 aa	Known RBP	5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	GOLGA2	Q08379	1002 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	SLFN5	Q08AF3	891 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	TRMT2A	Q8IZ69	625 aa	Known RBP	5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	PLCD3	Q8N3E9	789 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	COG3	Q96JB2	828 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	TTC21A	Q8NDW8	1320 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	USP31	Q70CQ4	1352 aa		5.92	□□□□□ -1.46
ATP2C1-223	ENST00000515854	OVOS2	A0A0J9YW53	1432 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	OVOS2	Q6IE36	1432 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ADGRL3	Q9HAR2	1447 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	HOXB1	P14653	301 aa	Predicted RBP	5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	CCDC27	Q2M243	656 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	DUSP27	Q5VZP5	1158 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	TCP11L2	Q8N4U5	519 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	PMFBP1	Q8TBY8	1022 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	BBX	Q8WY36	941 aa	Predicted RBP	5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	PLEKHF1	Q96S99	279 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ZBTB47	Q9UFB7	747 aa	Predicted RBP	5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	RCAN3	Q9UKA8	241 aa		5.91	□□□□□ -1.46
ATP2C1-223	ENST00000515854	CDK12	Q9NYV4	1490 aa	Predicted RBP	5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	KDM4F	A0A1W2PPD8	638 aa		5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	ECM2	O94769	699 aa	Predicted RBP	5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	FBLN1	P23142	703 aa		5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	IL13	P35225	146 aa		5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	IRX6	P78412	446 aa	Predicted RBP	5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	WWC1	Q8IX03	1113 aa		5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	VSIG10	Q8N0Z9	540 aa		5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NGDN	Q8NEJ9	315 aa	Known RBP	5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	PNN	Q9H307	717 aa	Known RBP	5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	EMILIN1	Q9Y6C2	1016 aa		5.9	□□□□□ -1.46
ATP2C1-223	ENST00000515854	NALCN	Q8IZF0	1738 aa		5.9	□□□□□ -1.47
ATP2C1-223	ENST00000515854		E9PSI1	815 aa		5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	U2SURP	O15042	1029 aa	Known RBP	5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	FCHSD2	O94868	740 aa		5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	RRP1	P56182	461 aa	Known RBP	5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	WDR63	Q8IWG1	891 aa		5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PPP4R2	Q9NY27	417 aa		5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PHF8	Q9UPP1	1060 aa		5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	NCOA3	Q9Y6Q9	1424 aa		5.89	□□□□□ -1.47
ATP2C1-223	ENST00000515854	PPM1G	O15355	546 aa	Predicted RBP	5.88	□□□□□ -1.47
ATP2C1-223	ENST00000515854	TMPO	P42166	694 aa	Known RBP	5.88	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms