RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
PDE4D-225ENST00000515835 SNIP1Q8TAD8 396 aaKnown RBP11.46□□□□□ -0.57
PDE4D-225ENST00000515835 TNFRSF10AO00220 468 aa11.45□□□□□ -0.58
PDE4D-225ENST00000515835 ALG2Q9H553 416 aa11.45□□□□□ -0.58
PDE4D-225ENST00000515835 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
PDE4D-225ENST00000515835 NBPF20Q3BBV1 942 aa11.44□□□□□ -0.58
PDE4D-225ENST00000515835 CYP4X1Q8N118 509 aa11.44□□□□□ -0.58
PDE4D-225ENST00000515835 TOR4AQ9NXH8 423 aa11.44□□□□□ -0.58
PDE4D-225ENST00000515835 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
PDE4D-225ENST00000515835 VASH1Q7L8A9 365 aaPredicted RBP11.43□□□□□ -0.58
PDE4D-225ENST00000515835 PDZRN3Q9UPQ7 1066 aa11.43□□□□□ -0.58
PDE4D-225ENST00000515835 TTC24A2A3L6 582 aaPredicted RBP11.42□□□□□ -0.58
PDE4D-225ENST00000515835 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
PDE4D-225ENST00000515835 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
PDE4D-225ENST00000515835 ADH1CP00326 375 aa11.41□□□□□ -0.58
PDE4D-225ENST00000515835 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
PDE4D-225ENST00000515835 HDGFL1Q5TGJ6 251 aa11.41□□□□□ -0.58
PDE4D-225ENST00000515835 CEP126Q9P2H0 1117 aa11.41□□□□□ -0.58
PDE4D-225ENST00000515835 GRM5P41594 1212 aa11.4□□□□□ -0.58
PDE4D-225ENST00000515835 ADAMTS19Q8TE59 1207 aa11.4□□□□□ -0.58
PDE4D-225ENST00000515835 GLMNQ92990 594 aa11.4□□□□□ -0.58
PDE4D-225ENST00000515835 KCTD15Q96SI1 283 aaPredicted RBP11.4□□□□□ -0.58
PDE4D-225ENST00000515835 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
PDE4D-225ENST00000515835 ESPNB1AK53 854 aa11.39□□□□□ -0.59
PDE4D-225ENST00000515835 NR5A1Q13285 461 aa11.39□□□□□ -0.59
PDE4D-225ENST00000515835 SEPT12Q8IYM1 358 aa11.39□□□□□ -0.59
PDE4D-225ENST00000515835 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
PDE4D-225ENST00000515835 CCDC125Q86Z20 511 aa11.38□□□□□ -0.59
PDE4D-225ENST00000515835 CALR3Q96L12 384 aaKnown RBP11.38□□□□□ -0.59
PDE4D-225ENST00000515835 WASF2Q9Y6W5 498 aa11.38□□□□□ -0.59
PDE4D-225ENST00000515835 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
PDE4D-225ENST00000515835 J3QL48 77 aa11.36□□□□□ -0.59
PDE4D-225ENST00000515835 GIGYF1O75420 1035 aaPredicted RBP11.36□□□□□ -0.59
PDE4D-225ENST00000515835 SMPD1P17405 629 aa11.36□□□□□ -0.59
PDE4D-225ENST00000515835 FSHRP23945 695 aa11.36□□□□□ -0.59
PDE4D-225ENST00000515835 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
PDE4D-225ENST00000515835 HMGXB3Q12766 1538 aa11.35□□□□□ -0.59
PDE4D-225ENST00000515835 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
PDE4D-225ENST00000515835 NRG2O14511 850 aaPredicted RBP11.35□□□□□ -0.59
PDE4D-225ENST00000515835 GFRA3O60609 400 aa11.35□□□□□ -0.59
PDE4D-225ENST00000515835 LAPTM4AQ15012 233 aa11.35□□□□□ -0.59
PDE4D-225ENST00000515835 SLFNL1Q499Z3 407 aa11.35□□□□□ -0.59
PDE4D-225ENST00000515835 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
PDE4D-225ENST00000515835 PHTF2Q8N3S3 785 aa11.34□□□□□ -0.59
PDE4D-225ENST00000515835 DHX9Q08211 1270 aaKnown RBP11.33□□□□□ -0.6
PDE4D-225ENST00000515835 NNTQ13423 1086 aa11.33□□□□□ -0.6
PDE4D-225ENST00000515835 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.6
PDE4D-225ENST00000515835 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
PDE4D-225ENST00000515835 RNF135Q8IUD6 432 aa11.32□□□□□ -0.6
PDE4D-225ENST00000515835 CCDC116Q8IYX3 515 aa11.32□□□□□ -0.6
PDE4D-225ENST00000515835 NR3C2P08235 984 aa11.31□□□□□ -0.6
PDE4D-225ENST00000515835 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
PDE4D-225ENST00000515835 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
PDE4D-225ENST00000515835 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
PDE4D-225ENST00000515835 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
PDE4D-225ENST00000515835 UCN2Q96RP3 112 aa11.3□□□□□ -0.6
PDE4D-225ENST00000515835 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
PDE4D-225ENST00000515835 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
PDE4D-225ENST00000515835 ERVH48-1M5A8F1 160 aa11.29□□□□□ -0.6
PDE4D-225ENST00000515835 DGAT1O75907 488 aa11.29□□□□□ -0.6
PDE4D-225ENST00000515835 RAB15P59190 212 aa11.29□□□□□ -0.6
PDE4D-225ENST00000515835 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
PDE4D-225ENST00000515835 PIK3CDO00329 1044 aa11.28□□□□□ -0.6
PDE4D-225ENST00000515835 MAP7D1Q3KQU3 841 aa11.28□□□□□ -0.6
PDE4D-225ENST00000515835 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
PDE4D-225ENST00000515835 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
PDE4D-225ENST00000515835 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
PDE4D-225ENST00000515835 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
PDE4D-225ENST00000515835 HPS1Q92902 700 aa11.27□□□□□ -0.61
PDE4D-225ENST00000515835 CCDC85AQ96PX6 553 aaPredicted RBP11.27□□□□□ -0.61
PDE4D-225ENST00000515835 SERPINA10Q9UK55 444 aa11.27□□□□□ -0.61
PDE4D-225ENST00000515835 AVPP01185 164 aa11.26□□□□□ -0.61
PDE4D-225ENST00000515835 SKIP12755 728 aa11.26□□□□□ -0.61
PDE4D-225ENST00000515835 PKDCCQ504Y2 493 aa11.26□□□□□ -0.61
PDE4D-225ENST00000515835 PLPP7Q8NBV4 271 aa11.26□□□□□ -0.61
PDE4D-225ENST00000515835 CCDC97Q96F63 343 aaPredicted RBP11.26□□□□□ -0.61
PDE4D-225ENST00000515835 KLF16Q9BXK1 252 aaPredicted RBP11.26□□□□□ -0.61
PDE4D-225ENST00000515835 PPP1R12CQ9BZL4 782 aa11.26□□□□□ -0.61
PDE4D-225ENST00000515835 PCDHB11Q9Y5F2 797 aa11.26□□□□□ -0.61
PDE4D-225ENST00000515835 ATP9BO43861 1147 aa11.25□□□□□ -0.61
PDE4D-225ENST00000515835 LZTS3O60299 673 aaPredicted RBP11.25□□□□□ -0.61
PDE4D-225ENST00000515835 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
PDE4D-225ENST00000515835 DOLKQ9UPQ8 538 aa11.25□□□□□ -0.61
PDE4D-225ENST00000515835 WDR4P57081 412 aaKnown RBP11.24□□□□□ -0.61
PDE4D-225ENST00000515835 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
PDE4D-225ENST00000515835 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
PDE4D-225ENST00000515835 CUX2O14529 1486 aa11.24□□□□□ -0.61
PDE4D-225ENST00000515835 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
PDE4D-225ENST00000515835 PALM3A6NDB9 673 aaPredicted RBP11.23□□□□□ -0.61
PDE4D-225ENST00000515835 TIMP2P16035 220 aa11.23□□□□□ -0.61
PDE4D-225ENST00000515835 TMPRSS4Q9NRS4 437 aa11.23□□□□□ -0.61
PDE4D-225ENST00000515835 TFIP11Q9UBB9 837 aaKnown RBP11.23□□□□□ -0.61
PDE4D-225ENST00000515835 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
PDE4D-225ENST00000515835 USP17L5A8MUK1 530 aa11.22□□□□□ -0.61
PDE4D-225ENST00000515835 ZIC2O95409 532 aaPredicted RBP11.22□□□□□ -0.61
PDE4D-225ENST00000515835 MYT1Q01538 1121 aa11.22□□□□□ -0.61
PDE4D-225ENST00000515835 PLEKHM2Q8IWE5 1019 aa11.22□□□□□ -0.61
PDE4D-225ENST00000515835 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
PDE4D-225ENST00000515835 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
PDE4D-225ENST00000515835 ITPKCQ96DU7 683 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms