RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	GNE	Q9Y223	722 aa	Known RBP	5.48	□□□□□ -1.53
SLC38A9-223	ENST00000515629	FYCO1	Q9BQS8	1478 aa		5.48	□□□□□ -1.53
SLC38A9-223	ENST00000515629	UBAP1L	F5GYI3	381 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	APLP1	P51693	650 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	SRPK2	P78362	688 aa	Known RBP	5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	TAGLN	Q01995	201 aa	Known RBP	5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	TSNAXIP1	Q2TAA8	658 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	OXER1	Q8TDS5	423 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	LARP6	Q9BRS8	491 aa	Known RBP	5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	MFRP	Q9BY79	579 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	ATP7A	Q04656	1500 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	MROH2A	A6NES4	1674 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	SUPT6H	Q7KZ85	1726 aa	Known RBP	5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	A2M	P01023	1474 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	PTPRK	Q15262	1439 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	KIAA1107	Q9UPP5	1409 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	ERCC5	P28715	1186 aa	Predicted RBP	5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	CDCA8	Q53HL2	280 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	C9orf131	Q5VYM1	1079 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	EGFLAM	Q63HQ2	1017 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	IPO4	Q8TEX9	1081 aa	Known RBP	5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	TANGO6	Q9C0B7	1094 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	POLR3E	Q9NVU0	708 aa		5.47	□□□□□ -1.53
SLC38A9-223	ENST00000515629	PLXNC1	O60486	1568 aa		5.46	□□□□□ -1.53
SLC38A9-223	ENST00000515629	REPIN1	Q9BWE0	567 aa	Known RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CLTC	Q00610	1675 aa	Known RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PLA2R1	Q13018	1463 aa		5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TCOF1	Q13428	1488 aa	Known RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CCNB3	Q8WWL7	1395 aa		5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ZNF644	Q9H582	1327 aa	Predicted RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	RINL	Q6ZS11	566 aa		5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	NOP9	Q86U38	636 aa	Known RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	FTSJ3	Q8IY81	847 aa	Known RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	NLGN1	Q8N2Q7	840 aa		5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	KCNB2	Q92953	911 aa		5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TMX4	Q9H1E5	349 aa	Predicted RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	G3BP2	Q9UN86	482 aa	Known RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CCDC61	Q9Y6R9	512 aa		5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	INO80	Q9ULG1	1556 aa	Predicted RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	5.46	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PLEKHH2	Q8IVE3	1493 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TLDC2	A0PJX2	215 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	HSP90AB2P	Q58FF8	381 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	NPAS4	Q8IUM7	802 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CCDC146	Q8IYE0	955 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MYO3A	Q8NEV4	1616 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MTUS2	Q5JR59	1369 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	GLIPR1L2	Q4G1C9	344 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	SDE2	Q6IQ49	451 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ADAMTS19	Q8TE59	1207 aa		5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	DHX38	Q92620	1227 aa	Known RBP	5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ZNF142	P52746	1687 aa	Predicted RBP	5.45	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ARID4A	P29374	1257 aa	Predicted RBP	5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MYBPC2	Q14324	1141 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CCDC144B	Q3MJ40	725 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TSHZ1	Q6ZSZ6	1077 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CHMP4B	Q9H444	224 aa	Known RBP	5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	FARP1	Q9Y4F1	1045 aa	Predicted RBP	5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MBD5	Q9P267	1494 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	WDHD1	O75717	1129 aa	Predicted RBP	5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	FECH	P22830	423 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CLEC4G	Q6UXB4	293 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	FBXO22	Q8NEZ5	403 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MAF1	Q9H063	256 aa		5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5.44	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PSEN1	P49768	467 aa		5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	FBXO31	Q5XUX0	539 aa	Predicted RBP	5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	A2ML1	A8K2U0	1454 aa		5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	IBSP	P21815	317 aa	Predicted RBP	5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	HDGFL1	Q5TGJ6	251 aa		5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	C11orf96	Q7Z7L8	435 aa		5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PIF1	Q9H611	641 aa		5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	DHX29	Q7Z478	1369 aa	Known RBP	5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	DNMT1	P26358	1616 aa	Known RBP	5.43	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ANKRD33B	A6NCL7	494 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	KIF3B	O15066	747 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	EIF3J	O75822	258 aa	Known RBP	5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	HSPA1L	P34931	641 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PIP4K2B	P78356	416 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MTMR14	Q8NCE2	650 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	GNL3L	Q9NVN8	582 aa	Known RBP	5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PRR12	Q9ULL5	1215 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PCDHB8	Q9UN66	801 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TBC1D2B	Q9UPU7	963 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PCDHB13	Q9Y5F0	798 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TIAM1	Q13009	1591 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ADGB	Q8N7X0	1667 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	RTEL1-TNFRSF6B	F6WH68	1400 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	LMOD3	Q0VAK6	560 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TCEAL1	Q15170	157 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	C4orf46	Q504U0	113 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	WDR78	Q5VTH9	848 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MAMSTR	Q6ZN01	415 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TBX22	Q9Y458	520 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TNR	Q92752	1358 aa		5.42	□□□□□ -1.54
SLC38A9-223	ENST00000515629	SOX12	O15370	315 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	HOXA2	O43364	376 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ANP32C	O43423	234 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	LHX8	Q68G74	356 aa		5.41	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms