RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 LTN1O94822 1766 aa20.57■□□□□ 0.88
PDCD6-211ENST00000515587 PLCH1Q4KWH8 1693 aa20.56■□□□□ 0.88
PDCD6-211ENST00000515587 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
PDCD6-211ENST00000515587 MORC1Q86VD1 984 aa20.55■□□□□ 0.88
PDCD6-211ENST00000515587 NWD2Q9ULI1 1742 aa20.54■□□□□ 0.88
PDCD6-211ENST00000515587 SLIT2O94813 1529 aa20.53■□□□□ 0.88
PDCD6-211ENST00000515587 FAM83GA6ND36 823 aa20.53■□□□□ 0.88
PDCD6-211ENST00000515587 NPC1L1Q9UHC9 1359 aa20.53■□□□□ 0.88
PDCD6-211ENST00000515587 BRWD3Q6RI45 1802 aa20.53■□□□□ 0.88
PDCD6-211ENST00000515587 YY1P25490 414 aa20.52■□□□□ 0.88
PDCD6-211ENST00000515587 CHRNA2Q15822 529 aa20.52■□□□□ 0.88
PDCD6-211ENST00000515587 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
PDCD6-211ENST00000515587 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.88
PDCD6-211ENST00000515587 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
PDCD6-211ENST00000515587 ARHGEF25Q86VW2 580 aa20.51■□□□□ 0.87
PDCD6-211ENST00000515587 ABCC6O95255 1503 aa20.5■□□□□ 0.87
PDCD6-211ENST00000515587 TNNT2P45379 298 aaPredicted RBP20.5■□□□□ 0.87
PDCD6-211ENST00000515587 BAG6P46379 1132 aa20.5■□□□□ 0.87
PDCD6-211ENST00000515587 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.5■□□□□ 0.87
PDCD6-211ENST00000515587 AATKQ6ZMQ8 1374 aa20.49■□□□□ 0.87
PDCD6-211ENST00000515587 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
PDCD6-211ENST00000515587 KRT27Q7Z3Y8 459 aa20.49■□□□□ 0.87
PDCD6-211ENST00000515587 BTG4Q9NY30 223 aa20.49■□□□□ 0.87
PDCD6-211ENST00000515587 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
PDCD6-211ENST00000515587 COL18A1P39060 1754 aa20.48■□□□□ 0.87
PDCD6-211ENST00000515587 RGPD5Q99666 1765 aa20.48■□□□□ 0.87
PDCD6-211ENST00000515587 AMPHP49418 695 aa20.47■□□□□ 0.87
PDCD6-211ENST00000515587 MAP3K19Q56UN5 1328 aa20.47■□□□□ 0.87
PDCD6-211ENST00000515587 EVA1CP58658 441 aa20.46■□□□□ 0.87
PDCD6-211ENST00000515587 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
PDCD6-211ENST00000515587 NRAPQ86VF7 1730 aa20.46■□□□□ 0.87
PDCD6-211ENST00000515587 ONECUT3O60422 494 aaPredicted RBP20.45■□□□□ 0.86
PDCD6-211ENST00000515587 FBLN1P23142 703 aa20.45■□□□□ 0.86
PDCD6-211ENST00000515587 RRS1Q15050 365 aaKnown RBP20.45■□□□□ 0.86
PDCD6-211ENST00000515587 VPS72Q15906 364 aa20.45■□□□□ 0.86
PDCD6-211ENST00000515587 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
PDCD6-211ENST00000515587 CAMTA1Q9Y6Y1 1673 aa20.45■□□□□ 0.86
PDCD6-211ENST00000515587 KIF24Q5T7B8 1368 aa20.44■□□□□ 0.86
PDCD6-211ENST00000515587 PPM1GO15355 546 aaPredicted RBP20.43■□□□□ 0.86
PDCD6-211ENST00000515587 IP6K1Q92551 441 aa20.43■□□□□ 0.86
PDCD6-211ENST00000515587 CCDC9Q9Y3X0 531 aaKnown RBP20.43■□□□□ 0.86
PDCD6-211ENST00000515587 STRN4Q9NRL3 753 aa20.42■□□□□ 0.86
PDCD6-211ENST00000515587 FLT4P35916 1363 aa20.42■□□□□ 0.86
PDCD6-211ENST00000515587 HOXC9P31274 260 aa20.41■□□□□ 0.86
PDCD6-211ENST00000515587 POLKQ9UBT6 870 aa20.41■□□□□ 0.86
PDCD6-211ENST00000515587 EMILIN1Q9Y6C2 1016 aa20.41■□□□□ 0.86
PDCD6-211ENST00000515587 COL5A2P05997 1499 aaPredicted RBP20.41■□□□□ 0.86
PDCD6-211ENST00000515587 PEAK1Q9H792 1746 aa20.41■□□□□ 0.86
PDCD6-211ENST00000515587 CSB-PGBD3P0DP91 1061 aa20.4■□□□□ 0.86
PDCD6-211ENST00000515587 AXIN2Q9Y2T1 843 aa20.4■□□□□ 0.86
PDCD6-211ENST00000515587 FAM208AQ9UK61 1670 aaKnown RBP20.39■□□□□ 0.86
PDCD6-211ENST00000515587 SMG6Q86US8 1419 aaKnown RBP20.39■□□□□ 0.85
PDCD6-211ENST00000515587 A0A0G2JS52 829 aa20.39■□□□□ 0.85
PDCD6-211ENST00000515587 MYT1Q01538 1121 aa20.39■□□□□ 0.85
PDCD6-211ENST00000515587 ANKRD24Q8TF21 1146 aa20.38■□□□□ 0.85
PDCD6-211ENST00000515587 INSRP06213 1382 aa20.37■□□□□ 0.85
PDCD6-211ENST00000515587 WDR17Q8IZU2 1322 aa20.37■□□□□ 0.85
PDCD6-211ENST00000515587 RALBP1Q15311 655 aa20.37■□□□□ 0.85
PDCD6-211ENST00000515587 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
PDCD6-211ENST00000515587 PARD3Q8TEW0 1356 aa20.36■□□□□ 0.85
PDCD6-211ENST00000515587 LTV1Q96GA3 475 aaPredicted RBP20.36■□□□□ 0.85
PDCD6-211ENST00000515587 ERBB3P21860 1342 aa20.35■□□□□ 0.85
PDCD6-211ENST00000515587 HSP90AB2PQ58FF8 381 aa20.35■□□□□ 0.85
PDCD6-211ENST00000515587 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
PDCD6-211ENST00000515587 TOM1L2Q6ZVM7 507 aa20.35■□□□□ 0.85
PDCD6-211ENST00000515587 CRB1P82279 1406 aa20.35■□□□□ 0.85
PDCD6-211ENST00000515587 MTHFSP49914 203 aa20.34■□□□□ 0.85
PDCD6-211ENST00000515587 EZH2Q15910 746 aaKnown RBP20.34■□□□□ 0.85
PDCD6-211ENST00000515587 FAM98CQ17RN3 349 aaKnown RBP20.34■□□□□ 0.85
PDCD6-211ENST00000515587 SPATA31A5Q5VU36 1347 aa20.33■□□□□ 0.85
PDCD6-211ENST00000515587 SPATA31A7Q8IWB4 1347 aa20.33■□□□□ 0.85
PDCD6-211ENST00000515587 PPP2R1AP30153 589 aa20.33■□□□□ 0.85
PDCD6-211ENST00000515587 CFAP53Q96M91 514 aa20.32■□□□□ 0.84
PDCD6-211ENST00000515587 NLRP2Q9NX02 1062 aa20.32■□□□□ 0.84
PDCD6-211ENST00000515587 SPATA31A1Q5TZJ5 1347 aa20.31■□□□□ 0.84
PDCD6-211ENST00000515587 USP35Q9P2H5 1018 aa20.31■□□□□ 0.84
PDCD6-211ENST00000515587 RGPD2P0DJD1 1756 aa20.31■□□□□ 0.84
PDCD6-211ENST00000515587 ANP32CO43423 234 aa20.3■□□□□ 0.84
PDCD6-211ENST00000515587 CARD10Q9BWT7 1032 aa20.3■□□□□ 0.84
PDCD6-211ENST00000515587 DISP2A7MBM2 1401 aa20.29■□□□□ 0.84
PDCD6-211ENST00000515587 TCP11L2Q8N4U5 519 aa20.29■□□□□ 0.84
PDCD6-211ENST00000515587 PRKRIP1Q9H875 184 aaPredicted RBP20.29■□□□□ 0.84
PDCD6-211ENST00000515587 THRAP3Q9Y2W1 955 aaKnown RBP20.29■□□□□ 0.84
PDCD6-211ENST00000515587 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
PDCD6-211ENST00000515587 WNK3Q9BYP7 1800 aa20.27■□□□□ 0.84
PDCD6-211ENST00000515587 CAMKK2Q96RR4 588 aa20.27■□□□□ 0.84
PDCD6-211ENST00000515587 EIF4A2Q14240 407 aaKnown RBP20.26■□□□□ 0.83
PDCD6-211ENST00000515587 RGPD1P0DJD0 1748 aa20.25■□□□□ 0.83
PDCD6-211ENST00000515587 DIAPH1O60610 1272 aaKnown RBP20.25■□□□□ 0.83
PDCD6-211ENST00000515587 BARGINQ6ZT62 677 aa20.24■□□□□ 0.83
PDCD6-211ENST00000515587 NBPF6Q5VWK0 638 aa20.23■□□□□ 0.83
PDCD6-211ENST00000515587 NBPF4Q96M43 638 aa20.23■□□□□ 0.83
PDCD6-211ENST00000515587 CDCA7Q9BWT1 371 aaPredicted RBP20.23■□□□□ 0.83
PDCD6-211ENST00000515587 TRIM37O94972 964 aa20.22■□□□□ 0.83
PDCD6-211ENST00000515587 IFFO2Q5TF58 517 aa20.22■□□□□ 0.83
PDCD6-211ENST00000515587 EYA1Q99502 592 aa20.22■□□□□ 0.83
PDCD6-211ENST00000515587 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
PDCD6-211ENST00000515587 IL13P35225 146 aa20.21■□□□□ 0.83
PDCD6-211ENST00000515587 USHBP1Q8N6Y0 703 aa20.21■□□□□ 0.83
PDCD6-211ENST00000515587 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms