RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 CDCA7Q9BWT1 371 aaPredicted RBP3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 PLA2G2EQ9NZK7 142 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 SUPT5HO00267 1087 aaKnown RBP3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 TLL1O43897 1013 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 ERVK-9P63128 1117 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 RNF223E7ERA6 249 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 SLC4A9Q96Q91 983 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 ZBTB7BO15156 539 aaPredicted RBP3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 PTK7Q13308 1070 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 SWI5Q1ZZU3 235 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 ZNF516Q92618 1163 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 SIRT1Q96EB6 747 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 S1PR4O95977 384 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 GAS2L2Q8NHY3 880 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 ARHGAP9Q9BRR9 750 aa3.26□□□□□ -1.89
AC025539.1-201ENST00000515343 NPR3P17342 541 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 HIRAP54198 1017 aaPredicted RBP3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 SKOR1P84550 965 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 ERFEQ4G0M1 354 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 PLA2G2CQ5R387 149 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 TBC1D9Q6ZT07 1266 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 FAM174AQ8TBP5 190 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 VRTNQ9H8Y1 702 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 TXNDC2Q86VQ3 553 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 TRIM50Q86XT4 487 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 ADAM32Q8TC27 787 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 BAP1Q92560 729 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 COPS2P61201 443 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 NR5A1Q13285 461 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 PLPP7Q8NBV4 271 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 KLF16Q9BXK1 252 aaPredicted RBP3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 TFIP11Q9UBB9 837 aaKnown RBP3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 EGFL7Q9UHF1 273 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 PCDHGA11Q9Y5H2 935 aa3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 ACIN1Q9UKV3 1341 aaKnown RBP3.25□□□□□ -1.89
AC025539.1-201ENST00000515343 FOXK2Q01167 660 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 CCDC85AQ96PX6 553 aaPredicted RBP3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 ARID3CA6NKF2 412 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 GRM5P41594 1212 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 TAS1R3Q7RTX0 852 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 MTFR1Q15390 333 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 PPP1R18Q6NYC8 613 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 Q6ZVU0 165 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 ZNF598Q86UK7 904 aaKnown RBP3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 NKX2-3Q8TAU0 364 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 PKD2L1Q9P0L9 805 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 ZMIZ1Q9ULJ6 1067 aa3.24□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L3A6NCW0 530 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L4A6NCW7 530 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 RNF40O75150 1001 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 CD2BP2O95400 341 aaKnown RBP3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 SMCPP49901 116 aaPredicted RBP3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 DHX9Q08211 1270 aaKnown RBP3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 TRIM32Q13049 653 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L2Q6R6M4 530 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 LIAT1Q6ZQX7 453 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L1Q7RTZ2 530 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 XAGE2Q96GT9 111 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L5A8MUK1 530 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 EML3Q32P44 896 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 B4GALNT3Q6L9W6 998 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 FOXJ1Q92949 421 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 FCF1Q9Y324 198 aaKnown RBP3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 ATP1A2P50993 1020 aa3.23□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L15C9J2P7 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L10C9JJH3 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L13C9JLJ4 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L12C9JPN9 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L11C9JVI0 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L21D6R901 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L18D6R9N7 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L22D6RA61 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L17D6RBQ6 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L19D6RCP7 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L20D6RJB6 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 EPHA4P54764 986 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 USP17L24Q0WX57 530 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 NBPF20Q3BBV1 942 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 SPRYD7Q5W111 196 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 TOR4AQ9NXH8 423 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 GPC6Q9Y625 555 aaPredicted RBP3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 GDF9O60383 454 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 ADH1CP00326 375 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 AVPP01185 164 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 SSFA2P28290 1259 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 ZNF295-AS1Q8N0V1 137 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 CRIPAKQ8N1N5 446 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 LILRA1O75019 489 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 WEE1P30291 646 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 PHLDB3Q6NSJ2 640 aa3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 SNIP1Q8TAD8 396 aaKnown RBP3.22□□□□□ -1.89
AC025539.1-201ENST00000515343 GNRH1P01148 92 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 USP4Q13107 963 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 SLFNL1Q499Z3 407 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 GIGYF1O75420 1035 aaPredicted RBP3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 CLDN10P78369 228 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 COL19A1Q14993 1142 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 OCLNQ16625 522 aa3.21□□□□□ -1.9
AC025539.1-201ENST00000515343 ZBTB33Q86T24 672 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms