RNA–Protein interactions for RNA: ENST00000514415.1

HOXC10-204, Transcript of homeobox C10, humanhuman

TSL 3

Gene HOXC10, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-204ENST00000514415 COG3Q96JB2 828 aa15.65■□□□□ 0.1
HOXC10-204ENST00000514415 UPF2Q9HAU5 1272 aaKnown RBP15.65■□□□□ 0.1
HOXC10-204ENST00000514415 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
HOXC10-204ENST00000514415 CACNA1FO60840 1977 aa15.64■□□□□ 0.09
HOXC10-204ENST00000514415 TRIM27P14373 513 aa15.64■□□□□ 0.09
HOXC10-204ENST00000514415 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
HOXC10-204ENST00000514415 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
HOXC10-204ENST00000514415 BECN1Q14457 450 aa15.64■□□□□ 0.09
HOXC10-204ENST00000514415 TSR2Q969E8 191 aaKnown RBP15.64■□□□□ 0.09
HOXC10-204ENST00000514415 FER1L4A9Z1Z3 1794 aa15.64■□□□□ 0.09
HOXC10-204ENST00000514415 ZNF853P0CG23 659 aa15.63■□□□□ 0.09
HOXC10-204ENST00000514415 SMC5Q8IY18 1101 aa15.63■□□□□ 0.09
HOXC10-204ENST00000514415 USP19O94966 1318 aa15.63■□□□□ 0.09
HOXC10-204ENST00000514415 PLEKHG3A1L390 1219 aa15.62■□□□□ 0.09
HOXC10-204ENST00000514415 OVOS2A0A0J9YW53 1432 aa15.61■□□□□ 0.09
HOXC10-204ENST00000514415 OVOS2Q6IE36 1432 aa15.61■□□□□ 0.09
HOXC10-204ENST00000514415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.09
HOXC10-204ENST00000514415 BCL2L13Q9BXK5 485 aa15.61■□□□□ 0.09
HOXC10-204ENST00000514415 ZBTB40Q9NUA8 1239 aa15.61■□□□□ 0.09
HOXC10-204ENST00000514415 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
HOXC10-204ENST00000514415 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
HOXC10-204ENST00000514415 XRN1Q8IZH2 1706 aaKnown RBP15.6■□□□□ 0.09
HOXC10-204ENST00000514415 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
HOXC10-204ENST00000514415 MLECQ14165 292 aa15.59■□□□□ 0.09
HOXC10-204ENST00000514415 USP31Q70CQ4 1352 aa15.59■□□□□ 0.09
HOXC10-204ENST00000514415 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
HOXC10-204ENST00000514415 ITPRIPQ8IWB1 547 aa15.58■□□□□ 0.08
HOXC10-204ENST00000514415 CFAP44Q96MT7 982 aa15.58■□□□□ 0.08
HOXC10-204ENST00000514415 TTC21AQ8NDW8 1320 aa15.58■□□□□ 0.08
HOXC10-204ENST00000514415 USP6P35125 1406 aa15.58■□□□□ 0.08
HOXC10-204ENST00000514415 PEAK1Q9H792 1746 aa15.57■□□□□ 0.08
HOXC10-204ENST00000514415 VAMP4O75379 141 aa15.57■□□□□ 0.08
HOXC10-204ENST00000514415 NME9Q86XW9 330 aa15.57■□□□□ 0.08
HOXC10-204ENST00000514415 MRPL50Q8N5N7 158 aaKnown RBP15.57■□□□□ 0.08
HOXC10-204ENST00000514415 TBC1D32Q96NH3 1257 aa15.57■□□□□ 0.08
HOXC10-204ENST00000514415 LAS1LQ9Y4W2 734 aaKnown RBP15.57■□□□□ 0.08
HOXC10-204ENST00000514415 TTC21BQ7Z4L5 1316 aa15.57■□□□□ 0.08
HOXC10-204ENST00000514415 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
HOXC10-204ENST00000514415 SSH2Q76I76 1423 aa15.57■□□□□ 0.08
HOXC10-204ENST00000514415 RGPD8O14715 1765 aaPredicted RBP15.57■□□□□ 0.08
HOXC10-204ENST00000514415 ADRA2BP18089 450 aa15.56■□□□□ 0.08
HOXC10-204ENST00000514415 TMEM57Q8N5G2 664 aa15.56■□□□□ 0.08
HOXC10-204ENST00000514415 GCC1Q96CN9 775 aa15.56■□□□□ 0.08
HOXC10-204ENST00000514415 API5Q9BZZ5 524 aaKnown RBP15.56■□□□□ 0.08
HOXC10-204ENST00000514415 N4BP2Q86UW6 1770 aaPredicted RBP15.55■□□□□ 0.08
HOXC10-204ENST00000514415 PRR36Q9H6K5 1346 aa15.55■□□□□ 0.08
HOXC10-204ENST00000514415 TBX22Q9Y458 520 aa15.55■□□□□ 0.08
HOXC10-204ENST00000514415 EMILIN1Q9Y6C2 1016 aa15.55■□□□□ 0.08
HOXC10-204ENST00000514415 ANKARQ7Z5J8 1434 aa15.54■□□□□ 0.08
HOXC10-204ENST00000514415 KIAA0232Q92628 1395 aa15.54■□□□□ 0.08
HOXC10-204ENST00000514415 ABCC4O15439 1325 aa15.54■□□□□ 0.08
HOXC10-204ENST00000514415 NFKBIBQ15653 356 aa15.54■□□□□ 0.08
HOXC10-204ENST00000514415 EID1Q9Y6B2 187 aa15.54■□□□□ 0.08
HOXC10-204ENST00000514415 ARHGEF10O15013 1369 aa15.53■□□□□ 0.08
HOXC10-204ENST00000514415 NUCB1Q02818 461 aa15.53■□□□□ 0.08
HOXC10-204ENST00000514415 PHACTR3Q96KR7 559 aa15.53■□□□□ 0.08
HOXC10-204ENST00000514415 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
HOXC10-204ENST00000514415 PTPRUQ92729 1446 aa15.52■□□□□ 0.08
HOXC10-204ENST00000514415 LRRC37A3O60309 1634 aa15.51■□□□□ 0.07
HOXC10-204ENST00000514415 ZBTB7BO15156 539 aaPredicted RBP15.51■□□□□ 0.07
HOXC10-204ENST00000514415 HMOX1P09601 288 aa15.51■□□□□ 0.07
HOXC10-204ENST00000514415 MBIPQ9NS73 344 aa15.51■□□□□ 0.07
HOXC10-204ENST00000514415 MARF1Q9Y4F3 1742 aaKnown RBP15.51■□□□□ 0.07
HOXC10-204ENST00000514415 ACEP12821 1306 aa15.5■□□□□ 0.07
HOXC10-204ENST00000514415 SEC24BO95487 1268 aa15.5■□□□□ 0.07
HOXC10-204ENST00000514415 TWISTNBQ3B726 338 aaPredicted RBP15.5■□□□□ 0.07
HOXC10-204ENST00000514415 PIK3C2AO00443 1686 aa15.5■□□□□ 0.07
HOXC10-204ENST00000514415 CHD2O14647 1828 aaKnown RBP15.49■□□□□ 0.07
HOXC10-204ENST00000514415 EIF4A2Q14240 407 aaKnown RBP15.48■□□□□ 0.07
HOXC10-204ENST00000514415 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
HOXC10-204ENST00000514415 SBNO1A3KN83 1393 aa15.48■□□□□ 0.07
HOXC10-204ENST00000514415 ZNF142P52746 1687 aaPredicted RBP15.48■□□□□ 0.07
HOXC10-204ENST00000514415 SOS1Q07889 1333 aaPredicted RBP15.47■□□□□ 0.07
HOXC10-204ENST00000514415 BMP2KLQ5H9B9 411 aa15.47■□□□□ 0.07
HOXC10-204ENST00000514415 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
HOXC10-204ENST00000514415 KDRP35968 1356 aa15.47■□□□□ 0.07
HOXC10-204ENST00000514415 PTPRCP08575 1304 aa15.46■□□□□ 0.07
HOXC10-204ENST00000514415 CHL1O00533 1208 aa15.46■□□□□ 0.07
HOXC10-204ENST00000514415 HTATSF1O43719 755 aaKnown RBP15.46■□□□□ 0.07
HOXC10-204ENST00000514415 LTKP29376 864 aa15.46■□□□□ 0.07
HOXC10-204ENST00000514415 GSE1Q14687 1217 aa15.46■□□□□ 0.07
HOXC10-204ENST00000514415 INTS3Q68E01 1043 aaKnown RBP15.46■□□□□ 0.07
HOXC10-204ENST00000514415 THEMISQ8N1K5 641 aaPredicted RBP15.46■□□□□ 0.07
HOXC10-204ENST00000514415 FLT4P35916 1363 aa15.46■□□□□ 0.07
HOXC10-204ENST00000514415 SLC4A3P48751 1232 aa15.45■□□□□ 0.06
HOXC10-204ENST00000514415 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
HOXC10-204ENST00000514415 C22orf23Q9BZE7 217 aa15.45■□□□□ 0.06
HOXC10-204ENST00000514415 PHRF1Q9P1Y6 1649 aaKnown RBP15.45■□□□□ 0.06
HOXC10-204ENST00000514415 FBLN1P23142 703 aa15.44■□□□□ 0.06
HOXC10-204ENST00000514415 RBM25P49756 843 aaKnown RBP15.44■□□□□ 0.06
HOXC10-204ENST00000514415 FAM208AQ9UK61 1670 aaKnown RBP15.44■□□□□ 0.06
HOXC10-204ENST00000514415 CRB1P82279 1406 aa15.43■□□□□ 0.06
HOXC10-204ENST00000514415 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
HOXC10-204ENST00000514415 ANTXR1Q9H6X2 564 aa15.43■□□□□ 0.06
HOXC10-204ENST00000514415 CEP170BQ9Y4F5 1589 aaPredicted RBP15.43■□□□□ 0.06
HOXC10-204ENST00000514415 LTN1O94822 1766 aa15.42■□□□□ 0.06
HOXC10-204ENST00000514415 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
HOXC10-204ENST00000514415 SULT6B1Q6IMI4 303 aa15.42■□□□□ 0.06
HOXC10-204ENST00000514415 RPAP2Q8IXW5 612 aaPredicted RBP15.42■□□□□ 0.06
HOXC10-204ENST00000514415 C8orf58Q8NAV2 365 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms