RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 CCDC116Q8IYX3 515 aa6.84□□□□□ -1.31
CALCOCO2-223ENST00000514267 ZBBXA8MT70 800 aa6.83□□□□□ -1.32
CALCOCO2-223ENST00000514267 DZIP3Q86Y13 1208 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-223ENST00000514267 HMX1Q9NP08 348 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-223ENST00000514267 TIMP2P16035 220 aa6.82□□□□□ -1.32
CALCOCO2-223ENST00000514267 GRM5P41594 1212 aa6.82□□□□□ -1.32
CALCOCO2-223ENST00000514267 ADAM32Q8TC27 787 aa6.82□□□□□ -1.32
CALCOCO2-223ENST00000514267 KCTD15Q96SI1 283 aaPredicted RBP6.82□□□□□ -1.32
CALCOCO2-223ENST00000514267 ZIC2O95409 532 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-223ENST00000514267 RNF20Q5VTR2 975 aa6.81□□□□□ -1.32
CALCOCO2-223ENST00000514267 FBXO31Q5XUX0 539 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-223ENST00000514267 MRPL14Q6P1L8 145 aaKnown RBP6.81□□□□□ -1.32
CALCOCO2-223ENST00000514267 TRIM34Q9BYJ4 488 aa6.81□□□□□ -1.32
CALCOCO2-223ENST00000514267 GMPR2Q9P2T1 348 aaKnown RBP6.81□□□□□ -1.32
CALCOCO2-223ENST00000514267 GJD4Q96KN9 370 aaPredicted RBP6.8□□□□□ -1.32
CALCOCO2-223ENST00000514267 TSEN34Q9BSV6 310 aaKnown RBP6.8□□□□□ -1.32
CALCOCO2-223ENST00000514267 KLF16Q9BXK1 252 aaPredicted RBP6.8□□□□□ -1.32
CALCOCO2-223ENST00000514267 NR1H3Q13133 447 aa6.79□□□□□ -1.32
CALCOCO2-223ENST00000514267 NPAS3Q8IXF0 933 aa6.79□□□□□ -1.32
CALCOCO2-223ENST00000514267 MEIOBQ8N635 442 aa6.79□□□□□ -1.32
CALCOCO2-223ENST00000514267 NR3C2P08235 984 aa6.78□□□□□ -1.32
CALCOCO2-223ENST00000514267 WWC1Q8IX03 1113 aa6.78□□□□□ -1.32
CALCOCO2-223ENST00000514267 MTMR14Q8NCE2 650 aa6.78□□□□□ -1.32
CALCOCO2-223ENST00000514267 PPP1R26Q5T8A7 1209 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-223ENST00000514267 ITPKCQ96DU7 683 aa6.77□□□□□ -1.33
CALCOCO2-223ENST00000514267 DACH1Q9UI36 760 aa6.77□□□□□ -1.33
CALCOCO2-223ENST00000514267 TRIM46Q7Z4K8 759 aa6.76□□□□□ -1.33
CALCOCO2-223ENST00000514267 C14orf37Q86TY3 774 aa6.76□□□□□ -1.33
CALCOCO2-223ENST00000514267 LINC00528Q8N1L1 170 aa6.76□□□□□ -1.33
CALCOCO2-223ENST00000514267 EPS8L1Q8TE68 723 aa6.76□□□□□ -1.33
CALCOCO2-223ENST00000514267 ESPNB1AK53 854 aa6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 EIF4G2P78344 907 aaKnown RBP eCLIP6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 FLIIQ13045 1269 aa6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 INTS6LQ5JSJ4 861 aaKnown RBP6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 Q6ZVU0 165 aa6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 SLC16A10Q8TF71 515 aa6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 ZFP42Q96MM3 310 aa6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 ARXQ96QS3 562 aa6.75□□□□□ -1.33
CALCOCO2-223ENST00000514267 BMP2P12643 396 aa6.74□□□□□ -1.33
CALCOCO2-223ENST00000514267 BMP1P13497 986 aa6.74□□□□□ -1.33
CALCOCO2-223ENST00000514267 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
CALCOCO2-223ENST00000514267 ZNF775Q96BV0 537 aaPredicted RBP6.74□□□□□ -1.33
CALCOCO2-223ENST00000514267 OCSTAMPQ9BR26 566 aa6.74□□□□□ -1.33
CALCOCO2-223ENST00000514267 ESF1Q9H501 851 aaKnown RBP6.74□□□□□ -1.33
CALCOCO2-223ENST00000514267 PCDHB9Q9Y5E1 797 aa6.74□□□□□ -1.33
CALCOCO2-223ENST00000514267 POTECB2RU33 542 aa6.73□□□□□ -1.33
CALCOCO2-223ENST00000514267 FBXO45P0C2W1 286 aa6.73□□□□□ -1.33
CALCOCO2-223ENST00000514267 SNRPBP14678 240 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-223ENST00000514267 SOX11P35716 441 aa6.73□□□□□ -1.33
CALCOCO2-223ENST00000514267 PURBQ96QR8 312 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-223ENST00000514267 ZFAND3Q9H8U3 227 aa6.73□□□□□ -1.33
CALCOCO2-223ENST00000514267 MAN1A2O60476 641 aa6.72□□□□□ -1.33
CALCOCO2-223ENST00000514267 TREML4Q6UXN2 200 aa6.72□□□□□ -1.33
CALCOCO2-223ENST00000514267 SNRKQ9NRH2 765 aa6.72□□□□□ -1.33
CALCOCO2-223ENST00000514267 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.71□□□□□ -1.342e-7■■■□□ 15.3
CALCOCO2-223ENST00000514267 NXF1Q9UBU9 619 aaKnown RBP6.71□□□□□ -1.34
CALCOCO2-223ENST00000514267 TERTO14746 1132 aaKnown RBP6.7□□□□□ -1.34
CALCOCO2-223ENST00000514267 SPINT1O43278 529 aa6.7□□□□□ -1.34
CALCOCO2-223ENST00000514267 RAD21O60216 631 aa6.7□□□□□ -1.34
CALCOCO2-223ENST00000514267 WFS1O76024 890 aa6.7□□□□□ -1.34
CALCOCO2-223ENST00000514267 ADH1AP07327 375 aa6.7□□□□□ -1.34
CALCOCO2-223ENST00000514267 MCM6Q14566 821 aa6.7□□□□□ -1.34
CALCOCO2-223ENST00000514267 TTLL8A6PVC2 850 aa6.69□□□□□ -1.34
CALCOCO2-223ENST00000514267 ERVH48-1M5A8F1 160 aa6.69□□□□□ -1.34
CALCOCO2-223ENST00000514267 C6orf118Q5T5N4 469 aa6.69□□□□□ -1.34
CALCOCO2-223ENST00000514267 ZNF784Q8NCA9 323 aaPredicted RBP6.69□□□□□ -1.34
CALCOCO2-223ENST00000514267 IRF7Q92985 503 aa6.69□□□□□ -1.34
CALCOCO2-223ENST00000514267 SOS2Q07890 1332 aaPredicted RBP6.69□□□□□ -1.34
CALCOCO2-223ENST00000514267 MYCP01106 439 aaPredicted RBP6.68□□□□□ -1.34
CALCOCO2-223ENST00000514267 CYP2U1Q7Z449 544 aa6.68□□□□□ -1.34
CALCOCO2-223ENST00000514267 SIRT1Q96EB6 747 aa6.68□□□□□ -1.34
CALCOCO2-223ENST00000514267 GPC1P35052 558 aa6.67□□□□□ -1.34
CALCOCO2-223ENST00000514267 RAB15P59190 212 aa6.67□□□□□ -1.34
CALCOCO2-223ENST00000514267 CC2D2BQ6DHV5 1058 aa6.67□□□□□ -1.34
CALCOCO2-223ENST00000514267 TBC1D2BQ9UPU7 963 aa6.67□□□□□ -1.34
CALCOCO2-223ENST00000514267 ATP5J2-PTCD1G3V325 749 aa6.66□□□□□ -1.34
CALCOCO2-223ENST00000514267 GPR37L1O60883 481 aa6.66□□□□□ -1.34
CALCOCO2-223ENST00000514267 GIGYF1O75420 1035 aaPredicted RBP6.66□□□□□ -1.34
CALCOCO2-223ENST00000514267 ERVK-9P63128 1117 aa6.66□□□□□ -1.34
CALCOCO2-223ENST00000514267 INSM1Q01101 510 aaPredicted RBP6.66□□□□□ -1.34
CALCOCO2-223ENST00000514267 H3BM21 787 aa6.65□□□□□ -1.34
CALCOCO2-223ENST00000514267 ABL2P42684 1182 aa6.65□□□□□ -1.34
CALCOCO2-223ENST00000514267 PTGIRP43119 386 aa6.65□□□□□ -1.34
CALCOCO2-223ENST00000514267 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.34
CALCOCO2-223ENST00000514267 SLFNL1Q499Z3 407 aa6.65□□□□□ -1.34
CALCOCO2-223ENST00000514267 WIPF1O43516 503 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 LILRA1O75019 489 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 CBLBQ13191 982 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 SEMA3FQ13275 785 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 MAP7D1Q3KQU3 841 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 GDPD2Q9HCC8 539 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 POLMQ9NP87 494 aaPredicted RBP6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 CYLDQ9NQC7 956 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 CEP126Q9P2H0 1117 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 PCDHB11Q9Y5F2 797 aa6.64□□□□□ -1.35
CALCOCO2-223ENST00000514267 UBTFP17480 764 aaKnown RBP6.63□□□□□ -1.35
CALCOCO2-223ENST00000514267 RELBQ01201 579 aa6.63□□□□□ -1.35
CALCOCO2-223ENST00000514267 USP4Q13107 963 aa6.63□□□□□ -1.35
CALCOCO2-223ENST00000514267 NLRP3Q96P20 1036 aa6.63□□□□□ -1.35
CALCOCO2-223ENST00000514267 TMPRSS4Q9NRS4 437 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms