RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 SSFA2P28290 1259 aa8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 MAP7D1Q3KQU3 841 aa8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 PHTF2Q8N3S3 785 aa8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 SPSB2Q99619 263 aa8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 OCSTAMPQ9BR26 566 aa8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
CALCOCO2-222ENST00000514006 MMP16P51512 607 aa8.27□□□□□ -1.09
CALCOCO2-222ENST00000514006 FAM160A2Q8N612 972 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-222ENST00000514006 ADAM32Q8TC27 787 aa8.27□□□□□ -1.09
CALCOCO2-222ENST00000514006 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
CALCOCO2-222ENST00000514006 ZBTB33Q86T24 672 aa8.26□□□□□ -1.09
CALCOCO2-222ENST00000514006 TRIM50Q86XT4 487 aa8.26□□□□□ -1.09
CALCOCO2-222ENST00000514006 OGFOD1Q8N543 542 aa8.26□□□□□ -1.09
CALCOCO2-222ENST00000514006 WNT2BQ93097 391 aa8.26□□□□□ -1.09
CALCOCO2-222ENST00000514006 HS3ST6Q96QI5 342 aa8.26□□□□□ -1.09
CALCOCO2-222ENST00000514006 CHIC2Q9UKJ5 165 aa8.26□□□□□ -1.09
CALCOCO2-222ENST00000514006 ATP2B4P23634 1241 aa8.25□□□□□ -1.09
CALCOCO2-222ENST00000514006 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
CALCOCO2-222ENST00000514006 FAM69CQ0P6D2 419 aa8.25□□□□□ -1.09
CALCOCO2-222ENST00000514006 DPYDQ12882 1025 aa8.25□□□□□ -1.09
CALCOCO2-222ENST00000514006 PRDM9Q9NQV7 894 aa8.25□□□□□ -1.09
CALCOCO2-222ENST00000514006 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
CALCOCO2-222ENST00000514006 TRAF7Q6Q0C0 670 aa8.24□□□□□ -1.09
CALCOCO2-222ENST00000514006 DZIP3Q86Y13 1208 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-222ENST00000514006 ZNF594Q96JF6 807 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-222ENST00000514006 DNAAF2Q9NVR5 837 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-222ENST00000514006 SLAIN2Q9P270 581 aa8.24□□□□□ -1.09
CALCOCO2-222ENST00000514006 NOD1Q9Y239 953 aa8.24□□□□□ -1.09
CALCOCO2-222ENST00000514006 COPS2P61201 443 aa8.23□□□□□ -1.09
CALCOCO2-222ENST00000514006 POTEB3A0JP26 581 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 SOWAHDA6NJG2 315 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 ERCC3P19447 782 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 CLDN10P78369 228 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 POTEBQ6S5H4 581 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 SH3BP5LQ7L8J4 393 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 LARGE2Q8N3Y3 721 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 CCDC24Q8N4L8 307 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
CALCOCO2-222ENST00000514006 ANKRD13DQ6ZTN6 518 aa8.21□□□□□ -1.1
CALCOCO2-222ENST00000514006 SPNS2Q8IVW8 549 aa8.21□□□□□ -1.1
CALCOCO2-222ENST00000514006 CARD14Q9BXL6 1004 aa8.21□□□□□ -1.1
CALCOCO2-222ENST00000514006 RBM19Q9Y4C8 960 aaKnown RBP8.21□□□□□ -1.1
CALCOCO2-222ENST00000514006 MAGEB6P1A0A0J9YX57 407 aa8.2□□□□□ -1.1
CALCOCO2-222ENST00000514006 SERPINB4P48594 390 aa8.2□□□□□ -1.1
CALCOCO2-222ENST00000514006 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
CALCOCO2-222ENST00000514006 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
CALCOCO2-222ENST00000514006 ADH1BP00325 375 aa8.19□□□□□ -1.1
CALCOCO2-222ENST00000514006 GTF2IP78347 998 aa8.19□□□□□ -1.1
CALCOCO2-222ENST00000514006 SIX5Q8N196 739 aa8.19□□□□□ -1.1
CALCOCO2-222ENST00000514006 C1orf216Q8TAB5 229 aa8.19□□□□□ -1.1
CALCOCO2-222ENST00000514006 CCDC85AQ96PX6 553 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-222ENST00000514006 RBM47A0AV96 593 aaKnown RBP8.18□□□□□ -1.1
CALCOCO2-222ENST00000514006 TLL1O43897 1013 aa8.18□□□□□ -1.1
CALCOCO2-222ENST00000514006 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
CALCOCO2-222ENST00000514006 PTCRAQ6ISU1 281 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-222ENST00000514006 DNAJC14Q6Y2X3 702 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-222ENST00000514006 BIN2Q9UBW5 565 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-222ENST00000514006 PRMT3O60678 531 aa8.17□□□□□ -1.1
CALCOCO2-222ENST00000514006 ZPR1O75312 459 aa8.17□□□□□ -1.1
CALCOCO2-222ENST00000514006 GIGYF1O75420 1035 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO2-222ENST00000514006 SEC13P55735 322 aa8.17□□□□□ -1.1
CALCOCO2-222ENST00000514006 AGERQ15109 404 aa8.17□□□□□ -1.1
CALCOCO2-222ENST00000514006 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
CALCOCO2-222ENST00000514006 KIAA1024Q9UPX6 916 aa8.17□□□□□ -1.1
CALCOCO2-222ENST00000514006 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
CALCOCO2-222ENST00000514006 ZBTB7BO15156 539 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-222ENST00000514006 MARSP56192 900 aaKnown RBP8.16□□□□□ -1.1
CALCOCO2-222ENST00000514006 CCDC102BQ68D86 513 aa8.16□□□□□ -1.1
CALCOCO2-222ENST00000514006 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-222ENST00000514006 SIRT1Q96EB6 747 aa8.16□□□□□ -1.1
CALCOCO2-222ENST00000514006 DKK1O94907 266 aa8.15□□□□□ -1.1
CALCOCO2-222ENST00000514006 SCNN1AP37088 669 aa8.15□□□□□ -1.1
CALCOCO2-222ENST00000514006 PSME1Q06323 249 aa8.15□□□□□ -1.1
CALCOCO2-222ENST00000514006 ERFEQ4G0M1 354 aa8.15□□□□□ -1.1
CALCOCO2-222ENST00000514006 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.1
CALCOCO2-222ENST00000514006 SLC6A16Q9GZN6 736 aa8.15□□□□□ -1.1
CALCOCO2-222ENST00000514006 CXXC1Q9P0U4 656 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-222ENST00000514006 NBPF20Q3BBV1 942 aa8.14□□□□□ -1.11
CALCOCO2-222ENST00000514006 THSD4Q6ZMP0 1018 aa8.14□□□□□ -1.11
CALCOCO2-222ENST00000514006 NYAP1Q6ZVC0 841 aa8.14□□□□□ -1.11
CALCOCO2-222ENST00000514006 TPCN2Q8NHX9 752 aa8.14□□□□□ -1.11
CALCOCO2-222ENST00000514006 BAP1Q92560 729 aa8.14□□□□□ -1.11
CALCOCO2-222ENST00000514006 PRIMPOLQ96LW4 560 aa8.14□□□□□ -1.11
CALCOCO2-222ENST00000514006 SFI1A8K8P3 1242 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 ABL1P00519 1130 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 USP4Q13107 963 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 OCLNQ16625 522 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 FOXJ1Q92949 421 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 MTRQ99707 1265 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 EGFL7Q9UHF1 273 aa8.13□□□□□ -1.11
CALCOCO2-222ENST00000514006 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
CALCOCO2-222ENST00000514006 ZNF511Q8NB15 262 aa8.12□□□□□ -1.11
CALCOCO2-222ENST00000514006 HINFPQ9BQA5 517 aa8.12□□□□□ -1.11
CALCOCO2-222ENST00000514006 BCL2L13Q9BXK5 485 aa8.12□□□□□ -1.11
CALCOCO2-222ENST00000514006 PCDHB11Q9Y5F2 797 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms