RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 TJAP1Q5JTD0 557 aa12.37□□□□□ -0.43
DDX60-205ENST00000513997 BRD2P25440 801 aaKnown RBP12.36□□□□□ -0.43
DDX60-205ENST00000513997 LRRN4Q8WUT4 740 aa12.36□□□□□ -0.43
DDX60-205ENST00000513997 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
DDX60-205ENST00000513997 ZC3H4Q9UPT8 1303 aaKnown RBP12.36□□□□□ -0.43
DDX60-205ENST00000513997 FBXO33Q7Z6M2 555 aa12.35□□□□□ -0.43
DDX60-205ENST00000513997 HIRIP3Q9BW71 556 aaPredicted RBP12.35□□□□□ -0.43
DDX60-205ENST00000513997 ZPR1O75312 459 aa12.34□□□□□ -0.43
DDX60-205ENST00000513997 CLP1Q92989 425 aaKnown RBP12.34□□□□□ -0.43
DDX60-205ENST00000513997 EIF4G2P78344 907 aaKnown RBP eCLIP12.33□□□□□ -0.44
DDX60-205ENST00000513997 MMRN1Q13201 1228 aa12.33□□□□□ -0.44
DDX60-205ENST00000513997 GIMAP6Q6P9H5 292 aa12.33□□□□□ -0.44
DDX60-205ENST00000513997 HELBQ8NG08 1087 aaPredicted RBP12.33□□□□□ -0.44
DDX60-205ENST00000513997 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
DDX60-205ENST00000513997 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
DDX60-205ENST00000513997 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
DDX60-205ENST00000513997 SPSB2Q99619 263 aa12.32□□□□□ -0.44
DDX60-205ENST00000513997 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
DDX60-205ENST00000513997 FAM69CQ0P6D2 419 aa12.31□□□□□ -0.44
DDX60-205ENST00000513997 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
DDX60-205ENST00000513997 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
DDX60-205ENST00000513997 TSC1Q92574 1164 aa12.31□□□□□ -0.44
DDX60-205ENST00000513997 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
DDX60-205ENST00000513997 FAM160A2Q8N612 972 aaPredicted RBP12.3□□□□□ -0.44
DDX60-205ENST00000513997 NFATC2IPQ8NCF5 419 aa12.3□□□□□ -0.44
DDX60-205ENST00000513997 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L15C9J2P7 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L10C9JJH3 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L13C9JLJ4 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L12C9JPN9 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L11C9JVI0 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L21D6R901 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L18D6R9N7 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L22D6RA61 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L17D6RBQ6 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L19D6RCP7 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L20D6RJB6 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 TLL1O43897 1013 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 ERCC5P28715 1186 aaPredicted RBP12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L24Q0WX57 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L2Q6R6M4 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 DPH6Q7L8W6 267 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
DDX60-205ENST00000513997 TSNAXIP1Q2TAA8 658 aa12.28□□□□□ -0.44
DDX60-205ENST00000513997 MSS51Q4VC12 460 aa12.28□□□□□ -0.44
DDX60-205ENST00000513997 PLEKHM2Q8IWE5 1019 aa12.28□□□□□ -0.44
DDX60-205ENST00000513997 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
DDX60-205ENST00000513997 PIK3CDO00329 1044 aa12.27□□□□□ -0.45
DDX60-205ENST00000513997 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
DDX60-205ENST00000513997 ADH1BP00325 375 aa12.26□□□□□ -0.45
DDX60-205ENST00000513997 CRTC2Q53ET0 693 aaPredicted RBP12.26□□□□□ -0.45
DDX60-205ENST00000513997 LYPD8Q6UX82 237 aa12.26□□□□□ -0.45
DDX60-205ENST00000513997 JUNDP17535 347 aa12.25□□□□□ -0.45
DDX60-205ENST00000513997 NKX2-3Q8TAU0 364 aa12.25□□□□□ -0.45
DDX60-205ENST00000513997 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
DDX60-205ENST00000513997 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
DDX60-205ENST00000513997 ITGBL1O95965 494 aaPredicted RBP12.24□□□□□ -0.45
DDX60-205ENST00000513997 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
DDX60-205ENST00000513997 USP17L5A8MUK1 530 aa12.23□□□□□ -0.45
DDX60-205ENST00000513997 MMP16P51512 607 aa12.23□□□□□ -0.45
DDX60-205ENST00000513997 PTK7Q13308 1070 aa12.23□□□□□ -0.45
DDX60-205ENST00000513997 CERS3Q8IU89 383 aa12.23□□□□□ -0.45
DDX60-205ENST00000513997 PRDM9Q9NQV7 894 aa12.23□□□□□ -0.45
DDX60-205ENST00000513997 DXOO77932 396 aaKnown RBP12.22□□□□□ -0.45
DDX60-205ENST00000513997 KCNC4Q03721 635 aa12.22□□□□□ -0.45
DDX60-205ENST00000513997 C1orf216Q8TAB5 229 aa12.22□□□□□ -0.45
DDX60-205ENST00000513997 EGFL7Q9UHF1 273 aa12.22□□□□□ -0.45
DDX60-205ENST00000513997 SKIP12755 728 aa12.21□□□□□ -0.45
DDX60-205ENST00000513997 SCNN1AP37088 669 aa12.21□□□□□ -0.45
DDX60-205ENST00000513997 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
DDX60-205ENST00000513997 ZNF662Q6ZS27 426 aa12.21□□□□□ -0.45
DDX60-205ENST00000513997 NOP9Q86U38 636 aaKnown RBP12.21□□□□□ -0.45
DDX60-205ENST00000513997 SLC6A16Q9GZN6 736 aa12.21□□□□□ -0.45
DDX60-205ENST00000513997 NR6A1Q15406 480 aa12.2□□□□□ -0.46
DDX60-205ENST00000513997 ASB16Q96NS5 453 aa12.2□□□□□ -0.46
DDX60-205ENST00000513997 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
DDX60-205ENST00000513997 LZTS3O60299 673 aaPredicted RBP12.19□□□□□ -0.46
DDX60-205ENST00000513997 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
DDX60-205ENST00000513997 NR1H3Q13133 447 aa12.19□□□□□ -0.46
DDX60-205ENST00000513997 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
DDX60-205ENST00000513997 PTPRNQ16849 979 aa12.19□□□□□ -0.46
DDX60-205ENST00000513997 PIK3R5Q8WYR1 880 aa12.19□□□□□ -0.46
DDX60-205ENST00000513997 BACH2Q9BYV9 841 aa12.19□□□□□ -0.46
DDX60-205ENST00000513997 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
DDX60-205ENST00000513997 SCAMP3O14828 347 aaKnown RBP12.17□□□□□ -0.46
DDX60-205ENST00000513997 RASA1P20936 1047 aa12.17□□□□□ -0.46
DDX60-205ENST00000513997 MAPK1P28482 360 aa12.17□□□□□ -0.46
DDX60-205ENST00000513997 ANKMY2Q8IV38 441 aa12.17□□□□□ -0.46
DDX60-205ENST00000513997 DEPDC4Q8N2C3 294 aa12.17□□□□□ -0.46
DDX60-205ENST00000513997 S1PR4O95977 384 aa12.16□□□□□ -0.46
DDX60-205ENST00000513997 F12P00748 615 aaPredicted RBP12.16□□□□□ -0.46
DDX60-205ENST00000513997 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
DDX60-205ENST00000513997 H3BRB1 525 aa12.15□□□□□ -0.46
DDX60-205ENST00000513997 MRPL58Q14197 206 aaKnown RBP12.15□□□□□ -0.46
DDX60-205ENST00000513997 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
DDX60-205ENST00000513997 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.46
DDX60-205ENST00000513997 LNPKQ9C0E8 428 aa12.15□□□□□ -0.46
DDX60-205ENST00000513997 TUT1Q9H6E5 874 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms