RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 PTK2Q05397 1052 aa7.38□□□□□ -1.23
PROM1-216ENST00000513946 FSHRP23945 695 aa7.37□□□□□ -1.23
PROM1-216ENST00000513946 ADAM32Q8TC27 787 aa7.37□□□□□ -1.23
PROM1-216ENST00000513946 KCTD15Q96SI1 283 aaPredicted RBP7.37□□□□□ -1.23
PROM1-216ENST00000513946 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
PROM1-216ENST00000513946 CCDC116Q8IYX3 515 aa7.36□□□□□ -1.23
PROM1-216ENST00000513946 PURBQ96QR8 312 aaKnown RBP7.36□□□□□ -1.23
PROM1-216ENST00000513946 PPP1R26Q5T8A7 1209 aaPredicted RBP7.35□□□□□ -1.23
PROM1-216ENST00000513946 MEIOBQ8N635 442 aa7.35□□□□□ -1.23
PROM1-216ENST00000513946 CDV3Q9UKY7 258 aaKnown RBP7.35□□□□□ -1.23
PROM1-216ENST00000513946 EMILIN1Q9Y6C2 1016 aa7.35□□□□□ -1.23
PROM1-216ENST00000513946 PRKCSHP14314 528 aaPredicted RBP7.34□□□□□ -1.23
PROM1-216ENST00000513946 Q6ZVU0 165 aa7.34□□□□□ -1.23
PROM1-216ENST00000513946 BANK1Q8NDB2 785 aa7.34□□□□□ -1.23
PROM1-216ENST00000513946 NXF1Q9UBU9 619 aaKnown RBP7.34□□□□□ -1.23
PROM1-216ENST00000513946 SOBPA7XYQ1 873 aa7.33□□□□□ -1.24
PROM1-216ENST00000513946 GPR37L1O60883 481 aa7.33□□□□□ -1.24
PROM1-216ENST00000513946 SCARF1Q14162 830 aa7.33□□□□□ -1.24
PROM1-216ENST00000513946 INTS6LQ5JSJ4 861 aaKnown RBP7.33□□□□□ -1.24
PROM1-216ENST00000513946 ESPNB1AK53 854 aa7.32□□□□□ -1.24
PROM1-216ENST00000513946 WIPF1O43516 503 aa7.32□□□□□ -1.24
PROM1-216ENST00000513946 CBLBQ13191 982 aa7.32□□□□□ -1.24
PROM1-216ENST00000513946 SLC10A4Q96EP9 437 aa7.32□□□□□ -1.24
PROM1-216ENST00000513946 SNRKQ9NRH2 765 aa7.32□□□□□ -1.24
PROM1-216ENST00000513946 SOS2Q07890 1332 aaPredicted RBP7.31□□□□□ -1.24
PROM1-216ENST00000513946 SOCS7O14512 581 aa7.31□□□□□ -1.24
PROM1-216ENST00000513946 C6orf118Q5T5N4 469 aa7.31□□□□□ -1.24
PROM1-216ENST00000513946 NPAS3Q8IXF0 933 aa7.31□□□□□ -1.24
PROM1-216ENST00000513946 LINC00528Q8N1L1 170 aa7.31□□□□□ -1.24
PROM1-216ENST00000513946 MTMR14Q8NCE2 650 aa7.31□□□□□ -1.24
PROM1-216ENST00000513946 PNMA1Q8ND90 353 aa7.3□□□□□ -1.24
PROM1-216ENST00000513946 TSEN34Q9BSV6 310 aaKnown RBP7.3□□□□□ -1.24
PROM1-216ENST00000513946 TMPRSS4Q9NRS4 437 aa7.3□□□□□ -1.24
PROM1-216ENST00000513946 ZBBXA8MT70 800 aa7.29□□□□□ -1.24
PROM1-216ENST00000513946 LILRA1O75019 489 aa7.29□□□□□ -1.24
PROM1-216ENST00000513946 FBXO45P0C2W1 286 aa7.29□□□□□ -1.24
PROM1-216ENST00000513946 ADD1P35611 737 aaKnown RBP7.29□□□□□ -1.24
PROM1-216ENST00000513946 DHX9Q08211 1270 aaKnown RBP7.29□□□□□ -1.24
PROM1-216ENST00000513946 DZIP3Q86Y13 1208 aaKnown RBP7.29□□□□□ -1.24
PROM1-216ENST00000513946 KDF1Q8NAX2 398 aaPredicted RBP7.29□□□□□ -1.24
PROM1-216ENST00000513946 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
PROM1-216ENST00000513946 H3BM21 787 aa7.28□□□□□ -1.24
PROM1-216ENST00000513946 ERVH48-1M5A8F1 160 aa7.28□□□□□ -1.24
PROM1-216ENST00000513946 BMP2P12643 396 aa7.28□□□□□ -1.24
PROM1-216ENST00000513946 VEGFBP49765 207 aa7.28□□□□□ -1.24
PROM1-216ENST00000513946 DNMT3LQ9UJW3 386 aa7.28□□□□□ -1.24
PROM1-216ENST00000513946 SPINT1O43278 529 aa7.27□□□□□ -1.25
PROM1-216ENST00000513946 ERBB4Q15303 1308 aa7.27□□□□□ -1.25
PROM1-216ENST00000513946 GIGYF1O75420 1035 aaPredicted RBP7.26□□□□□ -1.25
PROM1-216ENST00000513946 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
PROM1-216ENST00000513946 NBPF20Q3BBV1 942 aa7.26□□□□□ -1.25
PROM1-216ENST00000513946 SLC16A10Q8TF71 515 aa7.26□□□□□ -1.25
PROM1-216ENST00000513946 UPP2O95045 317 aa7.25□□□□□ -1.25
PROM1-216ENST00000513946 SEPT12Q8IYM1 358 aa7.25□□□□□ -1.25
PROM1-216ENST00000513946 ZNF784Q8NCA9 323 aaPredicted RBP7.25□□□□□ -1.25
PROM1-216ENST00000513946 AGBL1Q96MI9 1066 aa7.25□□□□□ -1.25
PROM1-216ENST00000513946 MAN1A2O60476 641 aa7.24□□□□□ -1.25
PROM1-216ENST00000513946 GMPRP36959 345 aa7.24□□□□□ -1.25
PROM1-216ENST00000513946 NR1H3Q13133 447 aa7.24□□□□□ -1.25
PROM1-216ENST00000513946 PPFIA3O75145 1194 aa7.23□□□□□ -1.25
PROM1-216ENST00000513946 CTSOP43234 321 aaPredicted RBP7.23□□□□□ -1.25
PROM1-216ENST00000513946 IRF7Q92985 503 aa7.23□□□□□ -1.25
PROM1-216ENST00000513946 FIGNL2A6NMB9 653 aa7.22□□□□□ -1.25
PROM1-216ENST00000513946 TTLL8A6PVC2 850 aa7.22□□□□□ -1.25
PROM1-216ENST00000513946 VSIG8P0DPA2 414 aa7.22□□□□□ -1.25
PROM1-216ENST00000513946 RAB15P59190 212 aa7.22□□□□□ -1.25
PROM1-216ENST00000513946 PCDHB9Q9Y5E1 797 aa7.22□□□□□ -1.25
PROM1-216ENST00000513946 NDUFB9Q9Y6M9 179 aa7.22□□□□□ -1.25
PROM1-216ENST00000513946 ADH1AP07327 375 aa7.21□□□□□ -1.26
PROM1-216ENST00000513946 PTGIRP43119 386 aa7.21□□□□□ -1.26
PROM1-216ENST00000513946 MCCD1P59942 119 aaPredicted RBP7.21□□□□□ -1.26
PROM1-216ENST00000513946 RELBQ01201 579 aa7.21□□□□□ -1.26
PROM1-216ENST00000513946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.21□□□□□ -1.26
PROM1-216ENST00000513946 INSM2Q96T92 566 aaPredicted RBP7.21□□□□□ -1.26
PROM1-216ENST00000513946 ZNF395Q9H8N7 513 aaPredicted RBP7.21□□□□□ -1.26
PROM1-216ENST00000513946 SLC35F4A4IF30 521 aa7.2□□□□□ -1.26
PROM1-216ENST00000513946 IRF5Q13568 498 aa7.2□□□□□ -1.26
PROM1-216ENST00000513946 INSM1Q01101 510 aaPredicted RBP7.19□□□□□ -1.26
PROM1-216ENST00000513946 PTSQ03393 145 aa7.19□□□□□ -1.26
PROM1-216ENST00000513946 CCDC125Q86Z20 511 aa7.19□□□□□ -1.26
PROM1-216ENST00000513946 TBC1D2BQ9UPU7 963 aa7.19□□□□□ -1.26
PROM1-216ENST00000513946 ERVK-9P63128 1117 aa7.18□□□□□ -1.26
PROM1-216ENST00000513946 FOXD4L5Q5VV16 416 aaPredicted RBP7.18□□□□□ -1.26
PROM1-216ENST00000513946 GPR161Q8N6U8 529 aaKnown RBP7.18□□□□□ -1.26
PROM1-216ENST00000513946 RNF217Q8TC41 542 aa7.18□□□□□ -1.26
PROM1-216ENST00000513946 CYLDQ9NQC7 956 aa7.18□□□□□ -1.26
PROM1-216ENST00000513946 CEP126Q9P2H0 1117 aa7.18□□□□□ -1.26
PROM1-216ENST00000513946 PHTF2Q8N3S3 785 aa7.17□□□□□ -1.26
PROM1-216ENST00000513946 STK17AQ9UEE5 414 aa7.17□□□□□ -1.26
PROM1-216ENST00000513946 SENP3-EIF4A1A0A087X0R7 540 aa7.16□□□□□ -1.26
PROM1-216ENST00000513946 TRAK2O60296 914 aa7.16□□□□□ -1.26
PROM1-216ENST00000513946 SCTRP47872 440 aa7.16□□□□□ -1.26
PROM1-216ENST00000513946 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
PROM1-216ENST00000513946 RNF20Q5VTR2 975 aa7.16□□□□□ -1.26
PROM1-216ENST00000513946 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
PROM1-216ENST00000513946 NANOS1Q8WY41 292 aaKnown RBP7.16□□□□□ -1.26
PROM1-216ENST00000513946 APBB1O00213 710 aa7.15□□□□□ -1.26
PROM1-216ENST00000513946 RNF144AP50876 292 aaPredicted RBP7.15□□□□□ -1.26
PROM1-216ENST00000513946 CC2D2BQ6DHV5 1058 aa7.15□□□□□ -1.26
PROM1-216ENST00000513946 CCDC85AQ96PX6 553 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms