RNA–Protein interactions for RNA: ENST00000513597.5

RUFY3-212, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-212ENST00000513597 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L21D6R901 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 CRTC2Q53ET0 693 aaPredicted RBP11.12□□□□□ -0.63
RUFY3-212ENST00000513597 ZBTB33Q86T24 672 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
RUFY3-212ENST00000513597 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
RUFY3-212ENST00000513597 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
RUFY3-212ENST00000513597 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
RUFY3-212ENST00000513597 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
RUFY3-212ENST00000513597 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
RUFY3-212ENST00000513597 IVNS1ABPQ9Y6Y0 642 aa11.1□□□□□ -0.63
RUFY3-212ENST00000513597 RASA1P20936 1047 aa11.09□□□□□ -0.63
RUFY3-212ENST00000513597 TSGA10IPQ3SY00 556 aa11.09□□□□□ -0.63
RUFY3-212ENST00000513597 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
RUFY3-212ENST00000513597 BPHLQ86WA6 291 aaPredicted RBP11.09□□□□□ -0.63
RUFY3-212ENST00000513597 BAP1Q92560 729 aa11.09□□□□□ -0.63
RUFY3-212ENST00000513597 EML3Q32P44 896 aa11.08□□□□□ -0.64
RUFY3-212ENST00000513597 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
RUFY3-212ENST00000513597 DZIP3Q86Y13 1208 aaKnown RBP11.08□□□□□ -0.64
RUFY3-212ENST00000513597 DKK1O94907 266 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 SSFA2P28290 1259 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 ZNF511Q8NB15 262 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 FAM200AQ8TCP9 573 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 CLP1Q92989 425 aaKnown RBP11.07□□□□□ -0.64
RUFY3-212ENST00000513597 CCDC85AQ96PX6 553 aaPredicted RBP11.07□□□□□ -0.64
RUFY3-212ENST00000513597 C1QTNF2Q9BXJ5 285 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
RUFY3-212ENST00000513597 TRIM50Q86XT4 487 aa11.06□□□□□ -0.64
RUFY3-212ENST00000513597 ANKMY2Q8IV38 441 aa11.06□□□□□ -0.64
RUFY3-212ENST00000513597 MTMR7Q9Y216 660 aa11.06□□□□□ -0.64
RUFY3-212ENST00000513597 ESPNB1AK53 854 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 ZBTB7BO15156 539 aaPredicted RBP11.05□□□□□ -0.64
RUFY3-212ENST00000513597 GIGYF1O75420 1035 aaPredicted RBP11.05□□□□□ -0.64
RUFY3-212ENST00000513597 PTPN5P54829 565 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 CLDN10P78369 228 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
RUFY3-212ENST00000513597 CCDC125Q86Z20 511 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 LARGE2Q8N3Y3 721 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 FOXJ1Q92949 421 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 NOD1Q9Y239 953 aa11.05□□□□□ -0.64
RUFY3-212ENST00000513597 S1PR4O95977 384 aa11.04□□□□□ -0.64
RUFY3-212ENST00000513597 ATP1A2P50993 1020 aa11.04□□□□□ -0.64
RUFY3-212ENST00000513597 SWI5Q1ZZU3 235 aa11.04□□□□□ -0.64
RUFY3-212ENST00000513597 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
RUFY3-212ENST00000513597 TRMT44Q8IYL2 757 aaKnown RBP11.04□□□□□ -0.64
RUFY3-212ENST00000513597 SIX5Q8N196 739 aa11.03□□□□□ -0.64
RUFY3-212ENST00000513597 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
RUFY3-212ENST00000513597 MAGEB6P1A0A0J9YX57 407 aa11.02□□□□□ -0.65
RUFY3-212ENST00000513597 DPYDQ12882 1025 aa11.02□□□□□ -0.65
RUFY3-212ENST00000513597 CARD14Q9BXL6 1004 aa11.02□□□□□ -0.65
RUFY3-212ENST00000513597 DNAAF2Q9NVR5 837 aaKnown RBP11.02□□□□□ -0.65
RUFY3-212ENST00000513597 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.65
RUFY3-212ENST00000513597 DOLKQ9UPQ8 538 aa11.02□□□□□ -0.65
RUFY3-212ENST00000513597 SEPT12Q8IYM1 358 aa11.01□□□□□ -0.65
RUFY3-212ENST00000513597 CCER1Q8TC90 406 aaPredicted RBP11.01□□□□□ -0.65
RUFY3-212ENST00000513597 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
RUFY3-212ENST00000513597 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
RUFY3-212ENST00000513597 SH3BP2P78314 561 aa11□□□□□ -0.65
RUFY3-212ENST00000513597 LINC01559Q495D7 138 aa11□□□□□ -0.65
RUFY3-212ENST00000513597 C1orf216Q8TAB5 229 aa11□□□□□ -0.65
RUFY3-212ENST00000513597 PCDHGA11Q9Y5H2 935 aa10.99□□□□□ -0.65
RUFY3-212ENST00000513597 AGERQ15109 404 aa10.98□□□□□ -0.65
RUFY3-212ENST00000513597 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
RUFY3-212ENST00000513597 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
RUFY3-212ENST00000513597 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
RUFY3-212ENST00000513597 KIAA1024Q9UPX6 916 aa10.98□□□□□ -0.65
RUFY3-212ENST00000513597 USP4Q13107 963 aa10.97□□□□□ -0.65
RUFY3-212ENST00000513597 SIRT1Q96EB6 747 aa10.97□□□□□ -0.65
RUFY3-212ENST00000513597 ITGBL1O95965 494 aaPredicted RBP10.96□□□□□ -0.65
RUFY3-212ENST00000513597 GTF2IP78347 998 aa10.96□□□□□ -0.65
RUFY3-212ENST00000513597 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
RUFY3-212ENST00000513597 ZNF594Q96JF6 807 aaPredicted RBP10.96□□□□□ -0.65
RUFY3-212ENST00000513597 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
RUFY3-212ENST00000513597 SEC13P55735 322 aa10.95□□□□□ -0.66
RUFY3-212ENST00000513597 OXLD1Q5BKU9 147 aa10.95□□□□□ -0.66
RUFY3-212ENST00000513597 CCDC102BQ68D86 513 aa10.94□□□□□ -0.66
RUFY3-212ENST00000513597 AMOTL2Q9Y2J4 779 aa10.94□□□□□ -0.66
RUFY3-212ENST00000513597 MAP4K5Q9Y4K4 846 aa10.94□□□□□ -0.66
RUFY3-212ENST00000513597 VARSP26640 1264 aaKnown RBP10.93□□□□□ -0.66
RUFY3-212ENST00000513597 WNT7BP56706 349 aa10.93□□□□□ -0.66
RUFY3-212ENST00000513597 OCLNQ16625 522 aa10.93□□□□□ -0.66
RUFY3-212ENST00000513597 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
RUFY3-212ENST00000513597 RNF223E7ERA6 249 aa10.92□□□□□ -0.66
RUFY3-212ENST00000513597 M0R2N6 131 aa10.92□□□□□ -0.66
RUFY3-212ENST00000513597 FOXD4L5Q5VV16 416 aaPredicted RBP10.92□□□□□ -0.66
RUFY3-212ENST00000513597 TAS1R3Q7RTX0 852 aa10.92□□□□□ -0.66
RUFY3-212ENST00000513597 FOXD4L4Q8WXT5 416 aaPredicted RBP10.92□□□□□ -0.66
RUFY3-212ENST00000513597 KCTD15Q96SI1 283 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms