RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 NCOA3Q9Y6Q9 1424 aa10.29□□□□□ -0.76
DDR1-273ENST00000513514 YTHDC2Q9H6S0 1430 aaKnown RBP10.28□□□□□ -0.76
DDR1-273ENST00000513514 MVPQ14764 893 aaKnown RBP10.28□□□□□ -0.76
DDR1-273ENST00000513514 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
DDR1-273ENST00000513514 ARHGAP45Q92619 1136 aa10.28□□□□□ -0.76
DDR1-273ENST00000513514 C19orf44Q9H6X5 657 aa10.28□□□□□ -0.76
DDR1-273ENST00000513514 ADAMTS2O95450 1211 aa10.27□□□□□ -0.77
DDR1-273ENST00000513514 U2AF1L5P0DN76 240 aaPredicted RBP10.27□□□□□ -0.77
DDR1-273ENST00000513514 U2AF1Q01081 240 aaKnown RBP eCLIP10.27□□□□□ -0.77
DDR1-273ENST00000513514 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
DDR1-273ENST00000513514 PLEKHF1Q96S99 279 aa10.27□□□□□ -0.77
DDR1-273ENST00000513514 XRN1Q8IZH2 1706 aaKnown RBP10.27□□□□□ -0.77
DDR1-273ENST00000513514 COL3A1P02461 1466 aaPredicted RBP10.26□□□□□ -0.77
DDR1-273ENST00000513514 TMPOP42166 694 aaKnown RBP10.26□□□□□ -0.77
DDR1-273ENST00000513514 LMOD3Q0VAK6 560 aa10.26□□□□□ -0.77
DDR1-273ENST00000513514 TBX22Q9Y458 520 aa10.26□□□□□ -0.77
DDR1-273ENST00000513514 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
DDR1-273ENST00000513514 KIF24Q5T7B8 1368 aa10.26□□□□□ -0.77
DDR1-273ENST00000513514 AATKQ6ZMQ8 1374 aa10.26□□□□□ -0.77
DDR1-273ENST00000513514 NRXN3Q9Y4C0 1643 aa10.25□□□□□ -0.77
DDR1-273ENST00000513514 DCCP43146 1447 aa10.25□□□□□ -0.77
DDR1-273ENST00000513514 DIAPH1O60610 1272 aaKnown RBP10.25□□□□□ -0.77
DDR1-273ENST00000513514 GSE1Q14687 1217 aa10.25□□□□□ -0.77
DDR1-273ENST00000513514 TMEM132EQ6IEE7 984 aa10.25□□□□□ -0.77
DDR1-273ENST00000513514 FTSJ3Q8IY81 847 aaKnown RBP10.25□□□□□ -0.77
DDR1-273ENST00000513514 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
DDR1-273ENST00000513514 FYB1O15117 783 aa10.24□□□□□ -0.77
DDR1-273ENST00000513514 IGHDP01880 384 aa10.24□□□□□ -0.77
DDR1-273ENST00000513514 SRPK2P78362 688 aaKnown RBP10.24□□□□□ -0.77
DDR1-273ENST00000513514 ATF7IPQ6VMQ6 1270 aa10.24□□□□□ -0.77
DDR1-273ENST00000513514 POGKQ9P215 609 aa10.24□□□□□ -0.77
DDR1-273ENST00000513514 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
DDR1-273ENST00000513514 COG6Q9Y2V7 657 aa10.24□□□□□ -0.77
DDR1-273ENST00000513514 NALCNQ8IZF0 1738 aa10.24□□□□□ -0.77
DDR1-273ENST00000513514 SENP3-EIF4A1A0A087X0R7 540 aa10.23□□□□□ -0.77
DDR1-273ENST00000513514 NFKBIBQ15653 356 aa10.23□□□□□ -0.77
DDR1-273ENST00000513514 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
DDR1-273ENST00000513514 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
DDR1-273ENST00000513514 ATRNO75882 1429 aa10.23□□□□□ -0.77
DDR1-273ENST00000513514 EDC4Q6P2E9 1401 aaKnown RBP10.23□□□□□ -0.77
DDR1-273ENST00000513514 PTMSP20962 102 aa10.22□□□□□ -0.77
DDR1-273ENST00000513514 RGS3P49796 1198 aa10.22□□□□□ -0.77
DDR1-273ENST00000513514 SMC5Q8IY18 1101 aa10.22□□□□□ -0.77
DDR1-273ENST00000513514 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
DDR1-273ENST00000513514 TBC1D32Q96NH3 1257 aa10.22□□□□□ -0.77
DDR1-273ENST00000513514 PIK3R4Q99570 1358 aa10.22□□□□□ -0.77
DDR1-273ENST00000513514 CD163L1Q9NR16 1453 aa10.22□□□□□ -0.77
DDR1-273ENST00000513514 PANK1Q8TE04 598 aa10.21□□□□□ -0.77
DDR1-273ENST00000513514 FRAT1Q92837 279 aaPredicted RBP10.21□□□□□ -0.77
DDR1-273ENST00000513514 LRRC59Q96AG4 307 aaKnown RBP10.21□□□□□ -0.77
DDR1-273ENST00000513514 GCC1Q96CN9 775 aa10.21□□□□□ -0.77
DDR1-273ENST00000513514 USP21Q9UK80 565 aa10.21□□□□□ -0.77
DDR1-273ENST00000513514 ISY1Q9ULR0 285 aaKnown RBP10.21□□□□□ -0.77
DDR1-273ENST00000513514 TECPR2O15040 1411 aa10.21□□□□□ -0.78
DDR1-273ENST00000513514 ADGRL3Q9HAR2 1447 aa10.21□□□□□ -0.78
DDR1-273ENST00000513514 METP08581 1390 aa10.2□□□□□ -0.78
DDR1-273ENST00000513514 GNAI1P63096 354 aa10.2□□□□□ -0.78
DDR1-273ENST00000513514 KIF20BQ96Q89 1820 aa10.2□□□□□ -0.78
DDR1-273ENST00000513514 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
DDR1-273ENST00000513514 CABP2Q9NPB3 220 aa10.2□□□□□ -0.78
DDR1-273ENST00000513514 SMC4Q9NTJ3 1288 aa10.2□□□□□ -0.78
DDR1-273ENST00000513514 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
DDR1-273ENST00000513514 CPSF1Q10570 1443 aaKnown RBP10.19□□□□□ -0.78
DDR1-273ENST00000513514 USP19O94966 1318 aa10.19□□□□□ -0.78
DDR1-273ENST00000513514 CDK19Q9BWU1 502 aa10.19□□□□□ -0.78
DDR1-273ENST00000513514 ZBTB40Q9NUA8 1239 aa10.19□□□□□ -0.78
DDR1-273ENST00000513514 IFT57Q9NWB7 429 aa10.19□□□□□ -0.78
DDR1-273ENST00000513514 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
DDR1-273ENST00000513514 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
DDR1-273ENST00000513514 C1orf167Q5SNV9 1468 aa10.18□□□□□ -0.78
DDR1-273ENST00000513514 RIPK4P57078 832 aa10.18□□□□□ -0.78
DDR1-273ENST00000513514 NEUROD2Q15784 382 aa10.18□□□□□ -0.78
DDR1-273ENST00000513514 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
DDR1-273ENST00000513514 L1TD1Q5T7N2 865 aaKnown RBP10.18□□□□□ -0.78
DDR1-273ENST00000513514 TRPC5Q9UL62 973 aaPredicted RBP10.18□□□□□ -0.78
DDR1-273ENST00000513514 KNDC1Q76NI1 1749 aa10.18□□□□□ -0.78
DDR1-273ENST00000513514 LRP5O75197 1615 aa10.18□□□□□ -0.78
DDR1-273ENST00000513514 BCL9LQ86UU0 1499 aa10.17□□□□□ -0.78
DDR1-273ENST00000513514 TRIM27P14373 513 aa10.17□□□□□ -0.78
DDR1-273ENST00000513514 DEFB132Q7Z7B7 95 aa10.17□□□□□ -0.78
DDR1-273ENST00000513514 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
DDR1-273ENST00000513514 LAS1LQ9Y4W2 734 aaKnown RBP10.17□□□□□ -0.78
DDR1-273ENST00000513514 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
DDR1-273ENST00000513514 COL22A1Q8NFW1 1626 aaPredicted RBP10.16□□□□□ -0.78
DDR1-273ENST00000513514 U2SURPO15042 1029 aaKnown RBP10.16□□□□□ -0.78
DDR1-273ENST00000513514 RLBP1P12271 317 aa10.16□□□□□ -0.78
DDR1-273ENST00000513514 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
DDR1-273ENST00000513514 EXOSC9Q06265 439 aaKnown RBP10.16□□□□□ -0.78
DDR1-273ENST00000513514 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
DDR1-273ENST00000513514 SSH1Q8WYL5 1049 aa10.16□□□□□ -0.78
DDR1-273ENST00000513514 SNX21Q969T3 373 aa10.16□□□□□ -0.78
DDR1-273ENST00000513514 ORAI2Q96SN7 254 aa10.16□□□□□ -0.78
DDR1-273ENST00000513514 API5Q9BZZ5 524 aaKnown RBP10.16□□□□□ -0.78
DDR1-273ENST00000513514 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
DDR1-273ENST00000513514 GLI3P10071 1580 aa10.16□□□□□ -0.78
DDR1-273ENST00000513514 ZNF853P0CG23 659 aa10.15□□□□□ -0.78
DDR1-273ENST00000513514 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.78
DDR1-273ENST00000513514 NUCB1Q02818 461 aa10.15□□□□□ -0.78
DDR1-273ENST00000513514 BMP2KLQ5H9B9 411 aa10.15□□□□□ -0.78
DDR1-273ENST00000513514 RRP7AQ9Y3A4 280 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms