RNA–Protein interactions for RNA: ENST00000513316.1

RAB3C-204, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-204ENST00000513316 ADH1CP00326 375 aa10.5□□□□□ -0.73
RAB3C-204ENST00000513316 ARID5BQ14865 1188 aa10.5□□□□□ -0.73
RAB3C-204ENST00000513316 SEPT12Q8IYM1 358 aa10.5□□□□□ -0.73
RAB3C-204ENST00000513316 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
RAB3C-204ENST00000513316 NR5A1Q13285 461 aa10.49□□□□□ -0.73
RAB3C-204ENST00000513316 LAPTM4AQ15012 233 aa10.49□□□□□ -0.73
RAB3C-204ENST00000513316 KCTD15Q96SI1 283 aaPredicted RBP10.49□□□□□ -0.73
RAB3C-204ENST00000513316 CEP126Q9P2H0 1117 aa10.49□□□□□ -0.73
RAB3C-204ENST00000513316 ESPNB1AK53 854 aa10.48□□□□□ -0.73
RAB3C-204ENST00000513316 GRM5P41594 1212 aa10.48□□□□□ -0.73
RAB3C-204ENST00000513316 RNF20Q5VTR2 975 aa10.48□□□□□ -0.73
RAB3C-204ENST00000513316 HDGFL1Q5TGJ6 251 aa10.47□□□□□ -0.73
RAB3C-204ENST00000513316 GLMNQ92990 594 aa10.47□□□□□ -0.73
RAB3C-204ENST00000513316 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
RAB3C-204ENST00000513316 WASF2Q9Y6W5 498 aa10.47□□□□□ -0.73
RAB3C-204ENST00000513316 NRG2O14511 850 aaPredicted RBP10.46□□□□□ -0.73
RAB3C-204ENST00000513316 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
RAB3C-204ENST00000513316 CALR3Q96L12 384 aaKnown RBP10.46□□□□□ -0.73
RAB3C-204ENST00000513316 J3QL48 77 aa10.45□□□□□ -0.74
RAB3C-204ENST00000513316 GFRA3O60609 400 aa10.45□□□□□ -0.74
RAB3C-204ENST00000513316 FSHRP23945 695 aa10.45□□□□□ -0.74
RAB3C-204ENST00000513316 DHX9Q08211 1270 aaKnown RBP10.45□□□□□ -0.74
RAB3C-204ENST00000513316 ADAMTS19Q8TE59 1207 aa10.45□□□□□ -0.74
RAB3C-204ENST00000513316 GIGYF1O75420 1035 aaPredicted RBP10.44□□□□□ -0.74
RAB3C-204ENST00000513316 SMPD1P17405 629 aa10.44□□□□□ -0.74
RAB3C-204ENST00000513316 SLFNL1Q499Z3 407 aa10.44□□□□□ -0.74
RAB3C-204ENST00000513316 INTS6LQ5JSJ4 861 aaKnown RBP10.44□□□□□ -0.74
RAB3C-204ENST00000513316 NNTQ13423 1086 aa10.43□□□□□ -0.74
RAB3C-204ENST00000513316 CCDC116Q8IYX3 515 aa10.43□□□□□ -0.74
RAB3C-204ENST00000513316 IRX2Q9BZI1 471 aaPredicted RBP10.43□□□□□ -0.74
RAB3C-204ENST00000513316 PHTF2Q8N3S3 785 aa10.42□□□□□ -0.74
RAB3C-204ENST00000513316 NFATC2IPQ8NCF5 419 aa10.42□□□□□ -0.74
RAB3C-204ENST00000513316 DGAT1O75907 488 aa10.41□□□□□ -0.74
RAB3C-204ENST00000513316 RNF135Q8IUD6 432 aa10.41□□□□□ -0.74
RAB3C-204ENST00000513316 FAM187AA6NFU0 413 aa10.4□□□□□ -0.74
RAB3C-204ENST00000513316 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
RAB3C-204ENST00000513316 EMILIN1Q9Y6C2 1016 aa10.4□□□□□ -0.74
RAB3C-204ENST00000513316 NR3C2P08235 984 aa10.39□□□□□ -0.75
RAB3C-204ENST00000513316 MAP7D1Q3KQU3 841 aa10.39□□□□□ -0.75
RAB3C-204ENST00000513316 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
RAB3C-204ENST00000513316 AVPP01185 164 aa10.38□□□□□ -0.75
RAB3C-204ENST00000513316 PPP1R26Q5T8A7 1209 aaPredicted RBP10.38□□□□□ -0.75
RAB3C-204ENST00000513316 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
RAB3C-204ENST00000513316 ERVH48-1M5A8F1 160 aa10.37□□□□□ -0.75
RAB3C-204ENST00000513316 LZTS3O60299 673 aaPredicted RBP10.37□□□□□ -0.75
RAB3C-204ENST00000513316 UCN2Q96RP3 112 aa10.37□□□□□ -0.75
RAB3C-204ENST00000513316 ARID3CA6NKF2 412 aa10.36□□□□□ -0.75
RAB3C-204ENST00000513316 RAB15P59190 212 aa10.36□□□□□ -0.75
RAB3C-204ENST00000513316 HPS1Q92902 700 aa10.36□□□□□ -0.75
RAB3C-204ENST00000513316 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
RAB3C-204ENST00000513316 SERPINA10Q9UK55 444 aa10.36□□□□□ -0.75
RAB3C-204ENST00000513316 SKIP12755 728 aa10.35□□□□□ -0.75
RAB3C-204ENST00000513316 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
RAB3C-204ENST00000513316 PLPP7Q8NBV4 271 aa10.35□□□□□ -0.75
RAB3C-204ENST00000513316 CCDC97Q96F63 343 aaPredicted RBP10.35□□□□□ -0.75
RAB3C-204ENST00000513316 CCDC85AQ96PX6 553 aaPredicted RBP10.35□□□□□ -0.75
RAB3C-204ENST00000513316 DOLKQ9UPQ8 538 aa10.35□□□□□ -0.75
RAB3C-204ENST00000513316 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
RAB3C-204ENST00000513316 PIK3CDO00329 1044 aa10.34□□□□□ -0.75
RAB3C-204ENST00000513316 ATP9BO43861 1147 aa10.34□□□□□ -0.75
RAB3C-204ENST00000513316 TIMP2P16035 220 aa10.34□□□□□ -0.75
RAB3C-204ENST00000513316 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
RAB3C-204ENST00000513316 MYT1Q01538 1121 aa10.34□□□□□ -0.75
RAB3C-204ENST00000513316 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
RAB3C-204ENST00000513316 PCDHB11Q9Y5F2 797 aa10.34□□□□□ -0.75
RAB3C-204ENST00000513316 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
RAB3C-204ENST00000513316 SMCPP49901 116 aaPredicted RBP10.33□□□□□ -0.76
RAB3C-204ENST00000513316 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
RAB3C-204ENST00000513316 TBC1D9Q6ZT07 1266 aa10.33□□□□□ -0.76
RAB3C-204ENST00000513316 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
RAB3C-204ENST00000513316 RB1CC1Q8TDY2 1594 aa10.33□□□□□ -0.76
RAB3C-204ENST00000513316 NACADO15069 1562 aa10.32□□□□□ -0.76
RAB3C-204ENST00000513316 PALM3A6NDB9 673 aaPredicted RBP10.32□□□□□ -0.76
RAB3C-204ENST00000513316 ZIC2O95409 532 aaPredicted RBP10.32□□□□□ -0.76
RAB3C-204ENST00000513316 ERVK-9P63128 1117 aa10.32□□□□□ -0.76
RAB3C-204ENST00000513316 PLEKHM2Q8IWE5 1019 aa10.32□□□□□ -0.76
RAB3C-204ENST00000513316 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
RAB3C-204ENST00000513316 ZNF784Q8NCA9 323 aaPredicted RBP10.32□□□□□ -0.76
RAB3C-204ENST00000513316 ITPKCQ96DU7 683 aa10.32□□□□□ -0.76
RAB3C-204ENST00000513316 C1orf115Q9H7X2 142 aa10.32□□□□□ -0.76
RAB3C-204ENST00000513316 TMPRSS4Q9NRS4 437 aa10.32□□□□□ -0.76
RAB3C-204ENST00000513316 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
RAB3C-204ENST00000513316 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
RAB3C-204ENST00000513316 USP4Q13107 963 aa10.31□□□□□ -0.76
RAB3C-204ENST00000513316 CC2D2BQ6DHV5 1058 aa10.31□□□□□ -0.76
RAB3C-204ENST00000513316 CAPN5O15484 640 aaPredicted RBP10.3□□□□□ -0.76
RAB3C-204ENST00000513316 EML3Q32P44 896 aa10.3□□□□□ -0.76
RAB3C-204ENST00000513316 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
RAB3C-204ENST00000513316 MAFBQ9Y5Q3 323 aaPredicted RBP10.3□□□□□ -0.76
RAB3C-204ENST00000513316 LILRA1O75019 489 aa10.29□□□□□ -0.76
RAB3C-204ENST00000513316 MYCP01106 439 aaPredicted RBP10.29□□□□□ -0.76
RAB3C-204ENST00000513316 Q6ZVU0 165 aa10.29□□□□□ -0.76
RAB3C-204ENST00000513316 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
RAB3C-204ENST00000513316 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
RAB3C-204ENST00000513316 ESF1Q9H501 851 aaKnown RBP10.29□□□□□ -0.76
RAB3C-204ENST00000513316 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
RAB3C-204ENST00000513316 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
RAB3C-204ENST00000513316 OXLD1Q5BKU9 147 aa10.28□□□□□ -0.76
RAB3C-204ENST00000513316 USP17L2Q6R6M4 530 aa10.28□□□□□ -0.76
RAB3C-204ENST00000513316 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms