RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
YIPF3-216ENST00000512713 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
YIPF3-216ENST00000512713 TMF1P82094 1093 aa12.88□□□□□ -0.35
YIPF3-216ENST00000512713 NINLQ9Y2I6 1382 aa12.88□□□□□ -0.35
YIPF3-216ENST00000512713 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
YIPF3-216ENST00000512713 PSDA5PKW4 1024 aaPredicted RBP12.87□□□□□ -0.35
YIPF3-216ENST00000512713 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
YIPF3-216ENST00000512713 CDCA8Q53HL2 280 aa12.87□□□□□ -0.35
YIPF3-216ENST00000512713 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
YIPF3-216ENST00000512713 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
YIPF3-216ENST00000512713 PARD3Q8TEW0 1356 aa12.86□□□□□ -0.35
YIPF3-216ENST00000512713 EXOC5O00471 708 aa12.86□□□□□ -0.35
YIPF3-216ENST00000512713 NLRP2Q9NX02 1062 aa12.86□□□□□ -0.35
YIPF3-216ENST00000512713 DISP2A7MBM2 1401 aa12.86□□□□□ -0.35
YIPF3-216ENST00000512713 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
YIPF3-216ENST00000512713 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
YIPF3-216ENST00000512713 A0A1W2PP64 1363 aa12.85□□□□□ -0.35
YIPF3-216ENST00000512713 R3HDM1Q15032 1099 aaKnown RBP12.85□□□□□ -0.35
YIPF3-216ENST00000512713 COG3Q96JB2 828 aa12.85□□□□□ -0.35
YIPF3-216ENST00000512713 USP47Q96K76 1375 aa12.84□□□□□ -0.35
YIPF3-216ENST00000512713 CCDC7Q96M83 1385 aa12.84□□□□□ -0.35
YIPF3-216ENST00000512713 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
YIPF3-216ENST00000512713 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
YIPF3-216ENST00000512713 LMO7Q8WWI1 1683 aa12.83□□□□□ -0.35
YIPF3-216ENST00000512713 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
YIPF3-216ENST00000512713 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
YIPF3-216ENST00000512713 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
YIPF3-216ENST00000512713 ANKRD24Q8TF21 1146 aa12.83□□□□□ -0.36
YIPF3-216ENST00000512713 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
YIPF3-216ENST00000512713 BRWD3Q6RI45 1802 aa12.83□□□□□ -0.36
YIPF3-216ENST00000512713 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
YIPF3-216ENST00000512713 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
YIPF3-216ENST00000512713 ERBB3P21860 1342 aa12.82□□□□□ -0.36
YIPF3-216ENST00000512713 IP6K1Q92551 441 aa12.81□□□□□ -0.36
YIPF3-216ENST00000512713 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
YIPF3-216ENST00000512713 NFAT5O94916 1531 aa12.8□□□□□ -0.36
YIPF3-216ENST00000512713 PLSCR1O15162 318 aa12.8□□□□□ -0.36
YIPF3-216ENST00000512713 IL2RBP14784 551 aa12.8□□□□□ -0.36
YIPF3-216ENST00000512713 AMPHP49418 695 aa12.8□□□□□ -0.36
YIPF3-216ENST00000512713 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
YIPF3-216ENST00000512713 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
YIPF3-216ENST00000512713 ABCC6O95255 1503 aa12.78□□□□□ -0.36
YIPF3-216ENST00000512713 FYB1O15117 783 aa12.77□□□□□ -0.37
YIPF3-216ENST00000512713 GGNBP2Q9H3C7 697 aa12.77□□□□□ -0.37
YIPF3-216ENST00000512713 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
YIPF3-216ENST00000512713 BCL9O00512 1426 aa12.77□□□□□ -0.37
YIPF3-216ENST00000512713 HOXC9P31274 260 aa12.76□□□□□ -0.37
YIPF3-216ENST00000512713 RGPD1P0DJD0 1748 aa12.75□□□□□ -0.37
YIPF3-216ENST00000512713 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
YIPF3-216ENST00000512713 FBLN1P23142 703 aa12.74□□□□□ -0.37
YIPF3-216ENST00000512713 TNS2Q63HR2 1409 aa12.73□□□□□ -0.37
YIPF3-216ENST00000512713 KCNQ2O43526 872 aa12.73□□□□□ -0.37
YIPF3-216ENST00000512713 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
YIPF3-216ENST00000512713 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
YIPF3-216ENST00000512713 COL18A1P39060 1754 aa12.73□□□□□ -0.37
YIPF3-216ENST00000512713 AKAP12Q02952 1782 aa12.73□□□□□ -0.37
YIPF3-216ENST00000512713 EIF4G2P78344 907 aaKnown RBP eCLIP12.72□□□□□ -0.37
YIPF3-216ENST00000512713 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
YIPF3-216ENST00000512713 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
YIPF3-216ENST00000512713 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
YIPF3-216ENST00000512713 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
YIPF3-216ENST00000512713 SPON1Q9HCB6 807 aa12.72□□□□□ -0.37
YIPF3-216ENST00000512713 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.37
YIPF3-216ENST00000512713 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.37
YIPF3-216ENST00000512713 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
YIPF3-216ENST00000512713 PROM2Q8N271 834 aa12.71□□□□□ -0.37
YIPF3-216ENST00000512713 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
YIPF3-216ENST00000512713 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
YIPF3-216ENST00000512713 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.38
YIPF3-216ENST00000512713 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
YIPF3-216ENST00000512713 ZCRB1Q8TBF4 217 aaKnown RBP12.7□□□□□ -0.38
YIPF3-216ENST00000512713 PPP1R1BQ9UD71 204 aaPredicted RBP12.7□□□□□ -0.38
YIPF3-216ENST00000512713 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
YIPF3-216ENST00000512713 HSP90AB2PQ58FF8 381 aa12.69□□□□□ -0.38
YIPF3-216ENST00000512713 NBPF6Q5VWK0 638 aa12.69□□□□□ -0.38
YIPF3-216ENST00000512713 NBPF4Q96M43 638 aa12.69□□□□□ -0.38
YIPF3-216ENST00000512713 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
YIPF3-216ENST00000512713 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
YIPF3-216ENST00000512713 HSPA5P11021 654 aaKnown RBP12.68□□□□□ -0.38
YIPF3-216ENST00000512713 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
YIPF3-216ENST00000512713 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
YIPF3-216ENST00000512713 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
YIPF3-216ENST00000512713 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
YIPF3-216ENST00000512713 TATP17735 454 aaPredicted RBP12.67□□□□□ -0.38
YIPF3-216ENST00000512713 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
YIPF3-216ENST00000512713 INSRP06213 1382 aa12.67□□□□□ -0.38
YIPF3-216ENST00000512713 FLT4P35916 1363 aa12.67□□□□□ -0.38
YIPF3-216ENST00000512713 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
YIPF3-216ENST00000512713 USHBP1Q8N6Y0 703 aa12.66□□□□□ -0.38
YIPF3-216ENST00000512713 USP54Q70EL1 1684 aa12.66□□□□□ -0.38
YIPF3-216ENST00000512713 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
YIPF3-216ENST00000512713 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.38
YIPF3-216ENST00000512713 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
YIPF3-216ENST00000512713 LRP5O75197 1615 aa12.65□□□□□ -0.38
YIPF3-216ENST00000512713 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
YIPF3-216ENST00000512713 ZBTB7AO95365 584 aa12.63□□□□□ -0.39
YIPF3-216ENST00000512713 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
YIPF3-216ENST00000512713 PANK3Q9H999 370 aa12.63□□□□□ -0.39
YIPF3-216ENST00000512713 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
YIPF3-216ENST00000512713 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms