RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.05■□□□□ 0.32
TRIO-218ENST00000512070 RNF214Q8ND24 703 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 DDX11Q96FC9 970 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 ME1P48163 572 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 PTPRGP23470 1445 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 GPRASP1Q5JY77 1395 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
TRIO-218ENST00000512070 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
TRIO-218ENST00000512070 K7ELQ4 463 aaPredicted RBP17.04■□□□□ 0.32
TRIO-218ENST00000512070 PDCL3Q9H2J4 239 aa17.04■□□□□ 0.32
TRIO-218ENST00000512070 MSH5O43196 834 aa17.04■□□□□ 0.32
TRIO-218ENST00000512070 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
TRIO-218ENST00000512070 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
TRIO-218ENST00000512070 ZSCAN12O43309 604 aa17.03■□□□□ 0.32
TRIO-218ENST00000512070 FIBPO43427 364 aa17.03■□□□□ 0.32
TRIO-218ENST00000512070 CRACR2AQ9BSW2 395 aa17.03■□□□□ 0.32
TRIO-218ENST00000512070 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
TRIO-218ENST00000512070 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
TRIO-218ENST00000512070 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.32
TRIO-218ENST00000512070 VPS36Q86VN1 386 aa17.02■□□□□ 0.31
TRIO-218ENST00000512070 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.31
TRIO-218ENST00000512070 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
TRIO-218ENST00000512070 EPB41L2O43491 1005 aaKnown RBP17.02■□□□□ 0.31
TRIO-218ENST00000512070 GRPEL1Q9HAV7 217 aa17.02■□□□□ 0.31
TRIO-218ENST00000512070 STAMBPO95630 424 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 ZNF287Q9HBT7 754 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 MICALCLQ6ZW33 695 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 ATF3P18847 181 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
TRIO-218ENST00000512070 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 FGFR1OPO95684 399 aaKnown RBP17.01■□□□□ 0.31
TRIO-218ENST00000512070 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
TRIO-218ENST00000512070 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
TRIO-218ENST00000512070 TAF4BQ92750 862 aa17■□□□□ 0.31
TRIO-218ENST00000512070 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
TRIO-218ENST00000512070 UBXN4Q92575 508 aa17■□□□□ 0.31
TRIO-218ENST00000512070 HECW1Q76N89 1606 aa17■□□□□ 0.31
TRIO-218ENST00000512070 ANKRD62A6NC57 917 aa17■□□□□ 0.31
TRIO-218ENST00000512070 ARHGAP29Q52LW3 1261 aa17■□□□□ 0.31
TRIO-218ENST00000512070 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
TRIO-218ENST00000512070 WDR63Q8IWG1 891 aa17■□□□□ 0.31
TRIO-218ENST00000512070 CAVIN2O95810 425 aa17■□□□□ 0.31
TRIO-218ENST00000512070 STK11IPQ8N1F8 1099 aa17■□□□□ 0.31
TRIO-218ENST00000512070 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 PPM1EQ8WY54 764 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 POLR3GO15318 223 aaPredicted RBP16.99■□□□□ 0.31
TRIO-218ENST00000512070 NEMFO60524 1076 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 FOSBP53539 338 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 NF2P35240 595 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 ARHGAP5Q13017 1502 aa16.99■□□□□ 0.31
TRIO-218ENST00000512070 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 NUP62CLQ9H1M0 184 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 LARP1BQ659C4 914 aaKnown RBP16.98■□□□□ 0.31
TRIO-218ENST00000512070 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 UPF3BQ9BZI7 483 aaKnown RBP16.98■□□□□ 0.31
TRIO-218ENST00000512070 LRRC9Q6ZRR7 1453 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 SPATA32Q96LK8 384 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 KIAA1328Q86T90 577 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
TRIO-218ENST00000512070 UQCRHLA0A096LP55 91 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 UQCRHP07919 91 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 KIF18AQ8NI77 898 aa16.98■□□□□ 0.31
TRIO-218ENST00000512070 TMCO3Q6UWJ1 677 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 NECTIN2Q92692 538 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 CALCOCO1Q9P1Z2 691 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
TRIO-218ENST00000512070 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 CENPHQ9H3R5 247 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 CTAGE5O15320 804 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 IGF1RP08069 1367 aa16.97■□□□□ 0.31
TRIO-218ENST00000512070 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
TRIO-218ENST00000512070 MYZAPP0CAP1 466 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 GOLGA6L9A6NEM1 432 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 ESPNB1AK53 854 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 MAP3K11Q16584 847 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 BLOC1S2Q6QNY1 142 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 TAX1BP1Q86VP1 789 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 GIMAP7Q8NHV1 300 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 DDX12PQ92771 950 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 SFPQP23246 707 aaKnown RBP eCLIP16.96■□□□□ 0.311e-6■□□□□ 10.1
TRIO-218ENST00000512070 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 TAOK3Q9H2K8 898 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 DAPK1P53355 1430 aa16.96■□□□□ 0.31
TRIO-218ENST00000512070 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
TRIO-218ENST00000512070 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
TRIO-218ENST00000512070 SPATA24Q86W54 205 aa16.95■□□□□ 0.3
TRIO-218ENST00000512070 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
TRIO-218ENST00000512070 KIF5CO60282 957 aa16.95■□□□□ 0.3
TRIO-218ENST00000512070 FYB1O15117 783 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms