RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SLC52A1Q9NWF4 448 aa2.66□□□□□ -1.98
TRAPPC13-211ENST00000512009 DDX60LQ5H9U9 1706 aaKnown RBP2.66□□□□□ -1.98
TRAPPC13-211ENST00000512009 DCHS1Q96JQ0 3298 aa2.66□□□□□ -1.98
TRAPPC13-211ENST00000512009 TNS3Q68CZ2 1445 aa2.66□□□□□ -1.98
TRAPPC13-211ENST00000512009 KANK1Q14678 1352 aa2.65□□□□□ -1.98
TRAPPC13-211ENST00000512009 KIAA0232Q92628 1395 aa2.65□□□□□ -1.99
TRAPPC13-211ENST00000512009 RPGRIP1LQ68CZ1 1315 aa2.65□□□□□ -1.99
TRAPPC13-211ENST00000512009 RGL2O15211 777 aa2.65□□□□□ -1.99
TRAPPC13-211ENST00000512009 OVOS2A0A0J9YW53 1432 aa2.65□□□□□ -1.99
TRAPPC13-211ENST00000512009 OVOS2Q6IE36 1432 aa2.65□□□□□ -1.99
TRAPPC13-211ENST00000512009 CCDC125Q86Z20 511 aa2.65□□□□□ -1.99
TRAPPC13-211ENST00000512009 MYH14Q7Z406 1995 aaKnown RBP2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 OVOS2A0A0G2JMS6 1433 aa2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 VPS13CQ709C8 3753 aa2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 EIF3AQ14152 1382 aaKnown RBP2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 MAST2Q6P0Q8 1798 aa2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 ATAD2Q6PL18 1390 aa2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 DMXL1Q9Y485 3027 aa2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 TTBK1Q5TCY1 1321 aaPredicted RBP2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 DOT1LQ8TEK3 1739 aa2.64□□□□□ -1.99
TRAPPC13-211ENST00000512009 PLEKHH1Q9ULM0 1364 aa2.63□□□□□ -1.99
TRAPPC13-211ENST00000512009 NBPF19A0A087WUL8 3843 aa2.63□□□□□ -1.99
TRAPPC13-211ENST00000512009 PPIP5K1Q6PFW1 1433 aa2.63□□□□□ -1.99
TRAPPC13-211ENST00000512009 KAT6BQ8WYB5 2073 aa2.63□□□□□ -1.99
TRAPPC13-211ENST00000512009 ANTXR1Q9H6X2 564 aa2.63□□□□□ -1.99
TRAPPC13-211ENST00000512009 EHMT2Q96KQ7 1210 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 ZNFX1Q9P2E3 1918 aaKnown RBP2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 NBEAQ8NFP9 2946 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 ATAD5Q96QE3 1844 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 TNS2Q63HR2 1409 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 COL4A4P53420 1690 aaPredicted RBP2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 TRPM7Q96QT4 1865 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 CCDC7Q96M83 1385 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 FOCADQ5VW36 1801 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 WDR81Q562E7 1941 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 COL11A2P13942 1736 aaPredicted RBP2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 IL17RAQ96F46 866 aa2.62□□□□□ -1.99
TRAPPC13-211ENST00000512009 SVEP1Q4LDE5 3571 aa2.61□□□□□ -1.99
TRAPPC13-211ENST00000512009 AKAP9Q99996 3911 aa2.61□□□□□ -1.99
TRAPPC13-211ENST00000512009 CSMD2Q7Z408 3487 aa2.61□□□□□ -1.99
TRAPPC13-211ENST00000512009 KMT2BQ9UMN6 2715 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 DISP3Q9P2K9 1392 aa2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 KALRNO60229 2985 aa2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 SPINK5Q9NQ38 1064 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 ANKRD30AQ9BXX3 1397 aa2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 ZNF644Q9H582 1327 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 LTKP29376 864 aa2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
TRAPPC13-211ENST00000512009 RGS19P49795 217 aa2.59□□□□□ -1.99
TRAPPC13-211ENST00000512009 KIF2CQ99661 725 aa2.59□□□□□ -1.99
TRAPPC13-211ENST00000512009 KIF15Q9NS87 1388 aa2.59□□□□□ -1.99
TRAPPC13-211ENST00000512009 SLX4Q8IY92 1834 aa2.59□□□□□ -2
TRAPPC13-211ENST00000512009 KIF7Q2M1P5 1343 aa2.59□□□□□ -2
TRAPPC13-211ENST00000512009 GREB1LQ9C091 1923 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-211ENST00000512009 A0A0G2JMZ2 1700 aa2.58□□□□□ -2
TRAPPC13-211ENST00000512009 ZFHX2Q9C0A1 2572 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-211ENST00000512009 PNISRQ8TF01 805 aaKnown RBP2.58□□□□□ -2
TRAPPC13-211ENST00000512009 TANC1Q9C0D5 1861 aa2.58□□□□□ -2
TRAPPC13-211ENST00000512009 TONSLQ96HA7 1378 aa2.58□□□□□ -2
TRAPPC13-211ENST00000512009 ATP10DQ9P241 1426 aa2.58□□□□□ -2
TRAPPC13-211ENST00000512009 TIMELESSQ9UNS1 1208 aa2.58□□□□□ -2
TRAPPC13-211ENST00000512009 MYH7P12883 1935 aa2.58□□□□□ -2
TRAPPC13-211ENST00000512009 NEDD4P46934 1319 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 FANCIQ9NVI1 1328 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 METP08581 1390 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 PLSCR1O15162 318 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 PARP14Q460N5 1801 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 ROBO2Q9HCK4 1378 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 PAK3O75914 559 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-211ENST00000512009 DOCK5Q9H7D0 1870 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 DCHS2Q6V1P9 2916 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 AMER1Q5JTC6 1135 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-211ENST00000512009 PELP1Q8IZL8 1130 aaKnown RBP2.57□□□□□ -2
TRAPPC13-211ENST00000512009 JMYQ8N9B5 988 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 MAP3K19Q56UN5 1328 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 ZNF335Q9H4Z2 1342 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-211ENST00000512009 ATRXP46100 2492 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 SIPA1L1O43166 1804 aa2.57□□□□□ -2
TRAPPC13-211ENST00000512009 ZNF316A6NFI3 1004 aaPredicted RBP2.56□□□□□ -2
TRAPPC13-211ENST00000512009 CFAP65Q6ZU64 1925 aaKnown RBP2.56□□□□□ -2
TRAPPC13-211ENST00000512009 MYH13Q9UKX3 1938 aa2.56□□□□□ -2
TRAPPC13-211ENST00000512009 SIN3AQ96ST3 1273 aa2.56□□□□□ -2
TRAPPC13-211ENST00000512009 SALL3Q9BXA9 1300 aa2.56□□□□□ -2
TRAPPC13-211ENST00000512009 LRRC37A2A6NM11 1700 aa2.56□□□□□ -2
TRAPPC13-211ENST00000512009 ERBB3P21860 1342 aa2.56□□□□□ -2
TRAPPC13-211ENST00000512009 PLEKHG3A1L390 1219 aa2.56□□□□□ -2
TRAPPC13-211ENST00000512009 DCAF11Q8TEB1 546 aa2.56□□□□□ -2
TRAPPC13-211ENST00000512009 UPF1Q92900 1129 aaKnown RBP eCLIP2.55□□□□□ -2
TRAPPC13-211ENST00000512009 ZZEF1O43149 2961 aa2.55□□□□□ -2
TRAPPC13-211ENST00000512009 AFAP1Q8N556 730 aa2.55□□□□□ -2
TRAPPC13-211ENST00000512009 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.55□□□□□ -2
TRAPPC13-211ENST00000512009 GTF3C3Q9Y5Q9 886 aa2.55□□□□□ -2
TRAPPC13-211ENST00000512009 PHIPQ8WWQ0 1821 aa2.55□□□□□ -2
TRAPPC13-211ENST00000512009 ALPK3Q96L96 1907 aa2.54□□□□□ -2
TRAPPC13-211ENST00000512009 PTPRFP10586 1907 aa2.54□□□□□ -2
TRAPPC13-211ENST00000512009 MGAMO43451 1857 aa2.54□□□□□ -2
TRAPPC13-211ENST00000512009 HEG1Q9ULI3 1381 aa2.54□□□□□ -2
TRAPPC13-211ENST00000512009 ATMQ13315 3056 aa2.54□□□□□ -2
TRAPPC13-211ENST00000512009 COL9A3Q14050 684 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms