RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 PRDM11Q9NQV5 511 aa14.27□□□□□ -0.13
HOXA4-203ENST00000511914 KTN1Q86UP2 1357 aaKnown RBP14.26□□□□□ -0.13
HOXA4-203ENST00000511914 SPATA31A5Q5VU36 1347 aa14.26□□□□□ -0.13
HOXA4-203ENST00000511914 SPATA31A7Q8IWB4 1347 aa14.26□□□□□ -0.13
HOXA4-203ENST00000511914 CHRNA2Q15822 529 aa14.25□□□□□ -0.13
HOXA4-203ENST00000511914 NUTM2GQ5VZR2 741 aa14.25□□□□□ -0.13
HOXA4-203ENST00000511914 STRN4Q9NRL3 753 aa14.25□□□□□ -0.13
HOXA4-203ENST00000511914 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
HOXA4-203ENST00000511914 R3HDM1Q15032 1099 aaKnown RBP14.24□□□□□ -0.13
HOXA4-203ENST00000511914 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
HOXA4-203ENST00000511914 ATP7BP35670 1465 aa14.24□□□□□ -0.13
HOXA4-203ENST00000511914 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
HOXA4-203ENST00000511914 KIAA0232Q92628 1395 aa14.23□□□□□ -0.13
HOXA4-203ENST00000511914 PRKAR2AP13861 404 aaKnown RBP14.23□□□□□ -0.13
HOXA4-203ENST00000511914 EZH2Q15910 746 aaKnown RBP14.23□□□□□ -0.13
HOXA4-203ENST00000511914 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
HOXA4-203ENST00000511914 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
HOXA4-203ENST00000511914 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
HOXA4-203ENST00000511914 EVC2Q86UK5 1308 aa14.22□□□□□ -0.13
HOXA4-203ENST00000511914 ZC3H6P61129 1189 aaKnown RBP14.22□□□□□ -0.13
HOXA4-203ENST00000511914 TRIM37O94972 964 aa14.21□□□□□ -0.13
HOXA4-203ENST00000511914 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
HOXA4-203ENST00000511914 NUDT16Q96DE0 195 aaKnown RBP14.21□□□□□ -0.13
HOXA4-203ENST00000511914 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
HOXA4-203ENST00000511914 PER1O15534 1290 aaPredicted RBP14.2□□□□□ -0.14
HOXA4-203ENST00000511914 NRKQ7Z2Y5 1582 aa14.2□□□□□ -0.14
HOXA4-203ENST00000511914 NUP188Q5SRE5 1749 aa14.19□□□□□ -0.14
HOXA4-203ENST00000511914 DISP2A7MBM2 1401 aa14.19□□□□□ -0.14
HOXA4-203ENST00000511914 RALBP1Q15311 655 aa14.19□□□□□ -0.14
HOXA4-203ENST00000511914 RREB1Q92766 1687 aa14.19□□□□□ -0.14
HOXA4-203ENST00000511914 QRICH2Q9H0J4 1663 aa14.19□□□□□ -0.14
HOXA4-203ENST00000511914 NINLQ9Y2I6 1382 aa14.19□□□□□ -0.14
HOXA4-203ENST00000511914 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
HOXA4-203ENST00000511914 CDK19Q9BWU1 502 aa14.18□□□□□ -0.14
HOXA4-203ENST00000511914 PANK3Q9H999 370 aa14.18□□□□□ -0.14
HOXA4-203ENST00000511914 NPC1L1Q9UHC9 1359 aa14.18□□□□□ -0.14
HOXA4-203ENST00000511914 APBA3O96018 575 aa14.17□□□□□ -0.14
HOXA4-203ENST00000511914 EVA1CP58658 441 aa14.17□□□□□ -0.14
HOXA4-203ENST00000511914 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
HOXA4-203ENST00000511914 LMO7Q8WWI1 1683 aa14.17□□□□□ -0.14
HOXA4-203ENST00000511914 CAMTA1Q9Y6Y1 1673 aa14.17□□□□□ -0.14
HOXA4-203ENST00000511914 ACEP12821 1306 aa14.16□□□□□ -0.14
HOXA4-203ENST00000511914 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
HOXA4-203ENST00000511914 CAMKK2Q96RR4 588 aa14.16□□□□□ -0.14
HOXA4-203ENST00000511914 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
HOXA4-203ENST00000511914 LARP1Q6PKG0 1096 aaKnown RBP14.15□□□□□ -0.14
HOXA4-203ENST00000511914 ABTB2Q8N961 1025 aa14.15□□□□□ -0.14
HOXA4-203ENST00000511914 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
HOXA4-203ENST00000511914 PDE3BQ13370 1112 aa14.14□□□□□ -0.15
HOXA4-203ENST00000511914 KNSTRNQ9Y448 316 aa14.14□□□□□ -0.15
HOXA4-203ENST00000511914 PARP4Q9UKK3 1724 aaKnown RBP14.13□□□□□ -0.15
HOXA4-203ENST00000511914 ZBTB7CA1YPR0 619 aa14.13□□□□□ -0.15
HOXA4-203ENST00000511914 CCDC61Q9Y6R9 512 aa14.12□□□□□ -0.15
HOXA4-203ENST00000511914 PARD3Q8TEW0 1356 aa14.11□□□□□ -0.15
HOXA4-203ENST00000511914 MYOM1P52179 1685 aa14.11□□□□□ -0.15
HOXA4-203ENST00000511914 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
HOXA4-203ENST00000511914 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
HOXA4-203ENST00000511914 SRPK2P78362 688 aaKnown RBP14.11□□□□□ -0.15
HOXA4-203ENST00000511914 PPIP5K1Q6PFW1 1433 aa14.11□□□□□ -0.15
HOXA4-203ENST00000511914 BARGINQ6ZT62 677 aa14.11□□□□□ -0.15
HOXA4-203ENST00000511914 TCP11L2Q8N4U5 519 aa14.1□□□□□ -0.15
HOXA4-203ENST00000511914 WNK3Q9BYP7 1800 aa14.1□□□□□ -0.15
HOXA4-203ENST00000511914 MYBBP1AQ9BQG0 1328 aaKnown RBP14.1□□□□□ -0.15
HOXA4-203ENST00000511914 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
HOXA4-203ENST00000511914 LRRC37A3O60309 1634 aa14.09□□□□□ -0.15
HOXA4-203ENST00000511914 PLEKHG3A1L390 1219 aa14.09□□□□□ -0.15
HOXA4-203ENST00000511914 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
HOXA4-203ENST00000511914 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
HOXA4-203ENST00000511914 CABP2Q9NPB3 220 aa14.09□□□□□ -0.15
HOXA4-203ENST00000511914 COL5A2P05997 1499 aaPredicted RBP14.09□□□□□ -0.15
HOXA4-203ENST00000511914 BRD4O60885 1362 aaPredicted RBP14.09□□□□□ -0.15
HOXA4-203ENST00000511914 CPDO75976 1380 aa14.09□□□□□ -0.15
HOXA4-203ENST00000511914 ANKRD36BQ8N2N9 1353 aa14.09□□□□□ -0.15
HOXA4-203ENST00000511914 GCP02774 474 aa14.08□□□□□ -0.16
HOXA4-203ENST00000511914 NLRP13Q86W25 1043 aa14.08□□□□□ -0.16
HOXA4-203ENST00000511914 AKAP12Q02952 1782 aa14.08□□□□□ -0.16
HOXA4-203ENST00000511914 USP19O94966 1318 aa14.08□□□□□ -0.16
HOXA4-203ENST00000511914 PEAK1Q9H792 1746 aa14.07□□□□□ -0.16
HOXA4-203ENST00000511914 NBPF14Q5TI25 921 aa14.07□□□□□ -0.16
HOXA4-203ENST00000511914 SLC12A5Q9H2X9 1139 aa14.07□□□□□ -0.16
HOXA4-203ENST00000511914 TERF2IPQ9NYB0 399 aa14.07□□□□□ -0.16
HOXA4-203ENST00000511914 CARD14Q9BXL6 1004 aa14.06□□□□□ -0.16
HOXA4-203ENST00000511914 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
HOXA4-203ENST00000511914 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
HOXA4-203ENST00000511914 CRB1P82279 1406 aa14.06□□□□□ -0.16
HOXA4-203ENST00000511914 COL18A1P39060 1754 aa14.05□□□□□ -0.16
HOXA4-203ENST00000511914 TMC1Q8TDI8 760 aa14.05□□□□□ -0.16
HOXA4-203ENST00000511914 PPP1R1BQ9UD71 204 aaPredicted RBP14.05□□□□□ -0.16
HOXA4-203ENST00000511914 THRAP3Q9Y2W1 955 aaKnown RBP14.05□□□□□ -0.16
HOXA4-203ENST00000511914 NSD2O96028 1365 aa14.05□□□□□ -0.16
HOXA4-203ENST00000511914 RGPD3A6NKT7 1758 aaPredicted RBP14.04□□□□□ -0.16
HOXA4-203ENST00000511914 RGPD4Q7Z3J3 1758 aa14.04□□□□□ -0.16
HOXA4-203ENST00000511914 NLRP6P59044 892 aa14.04□□□□□ -0.16
HOXA4-203ENST00000511914 CABP1Q9NZU7 370 aa14.04□□□□□ -0.16
HOXA4-203ENST00000511914 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
HOXA4-203ENST00000511914 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
HOXA4-203ENST00000511914 OVOS2A0A0J9YW53 1432 aa14.04□□□□□ -0.16
HOXA4-203ENST00000511914 OVOS2Q6IE36 1432 aa14.04□□□□□ -0.16
HOXA4-203ENST00000511914 YY1P25490 414 aa14.03□□□□□ -0.16
HOXA4-203ENST00000511914 TOM1L2Q6ZVM7 507 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms