RNA–Protein interactions for RNA: ENST00000511822.1

CDH9-204, Transcript of cadherin 9, humanhuman

TSL 4

Gene CDH9, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-204ENST00000511822 MSS51Q4VC12 460 aa10.83□□□□□ -0.68
CDH9-204ENST00000511822 GIGYF2Q6Y7W6 1299 aaKnown RBP10.83□□□□□ -0.68
CDH9-204ENST00000511822 LIAT1Q6ZQX7 453 aa10.83□□□□□ -0.68
CDH9-204ENST00000511822 AFAP1Q8N556 730 aa10.83□□□□□ -0.68
CDH9-204ENST00000511822 PRDM9Q9NQV7 894 aa10.83□□□□□ -0.68
CDH9-204ENST00000511822 TRIM66O15016 1216 aa10.82□□□□□ -0.68
CDH9-204ENST00000511822 GFRA3O60609 400 aa10.82□□□□□ -0.68
CDH9-204ENST00000511822 AK7Q96M32 723 aa10.82□□□□□ -0.68
CDH9-204ENST00000511822 CDK11AQ9UQ88 783 aaPredicted RBP10.82□□□□□ -0.68
CDH9-204ENST00000511822 ABCC1P33527 1531 aa10.82□□□□□ -0.68
CDH9-204ENST00000511822 CAMSAP1Q5T5Y3 1602 aa10.81□□□□□ -0.68
CDH9-204ENST00000511822 SPRYD7Q5W111 196 aa10.81□□□□□ -0.68
CDH9-204ENST00000511822 NUTM1Q86Y26 1132 aa10.81□□□□□ -0.68
CDH9-204ENST00000511822 CLIP1P30622 1438 aa10.81□□□□□ -0.68
CDH9-204ENST00000511822 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
CDH9-204ENST00000511822 MROH2AA6NES4 1674 aa10.8□□□□□ -0.68
CDH9-204ENST00000511822 PARP9Q8IXQ6 854 aa10.8□□□□□ -0.68
CDH9-204ENST00000511822 ESF1Q9H501 851 aaKnown RBP10.8□□□□□ -0.68
CDH9-204ENST00000511822 NRG2O14511 850 aaPredicted RBP10.79□□□□□ -0.68
CDH9-204ENST00000511822 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
CDH9-204ENST00000511822 GUCA2AQ02747 115 aa10.79□□□□□ -0.68
CDH9-204ENST00000511822 Q6ZNB5 142 aa10.79□□□□□ -0.68
CDH9-204ENST00000511822 PDZRN3Q9UPQ7 1066 aa10.79□□□□□ -0.68
CDH9-204ENST00000511822 FCF1Q9Y324 198 aaKnown RBP10.79□□□□□ -0.68
CDH9-204ENST00000511822 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
CDH9-204ENST00000511822 UBAP1LF5GYI3 381 aa10.78□□□□□ -0.68
CDH9-204ENST00000511822 ZNF598Q86UK7 904 aaKnown RBP10.78□□□□□ -0.68
CDH9-204ENST00000511822 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
CDH9-204ENST00000511822 ZNF335Q9H4Z2 1342 aaPredicted RBP10.78□□□□□ -0.68
CDH9-204ENST00000511822 PREX2Q70Z35 1606 aa10.77□□□□□ -0.68
CDH9-204ENST00000511822 TRIM67Q6ZTA4 783 aa10.77□□□□□ -0.69
CDH9-204ENST00000511822 BCANQ96GW7 911 aa10.77□□□□□ -0.69
CDH9-204ENST00000511822 MED1Q15648 1581 aaPredicted RBP10.77□□□□□ -0.69
CDH9-204ENST00000511822 MMP16P51512 607 aa10.76□□□□□ -0.69
CDH9-204ENST00000511822 ZNF697Q5TEC3 545 aa10.76□□□□□ -0.69
CDH9-204ENST00000511822 SPIRE2Q8WWL2 714 aa10.76□□□□□ -0.69
CDH9-204ENST00000511822 ZMYM3Q14202 1370 aa10.76□□□□□ -0.69
CDH9-204ENST00000511822 ITSN2Q9NZM3 1697 aa10.76□□□□□ -0.69
CDH9-204ENST00000511822 ARHGAP35Q9NRY4 1499 aa10.75□□□□□ -0.69
CDH9-204ENST00000511822 KIDINS220Q9ULH0 1771 aa10.75□□□□□ -0.69
CDH9-204ENST00000511822 CEP170BQ9Y4F5 1589 aaPredicted RBP10.75□□□□□ -0.69
CDH9-204ENST00000511822 SLC24A3Q9HC58 644 aa10.75□□□□□ -0.69
CDH9-204ENST00000511822 MYO3AQ8NEV4 1616 aa10.75□□□□□ -0.69
CDH9-204ENST00000511822 PLXNC1O60486 1568 aa10.74□□□□□ -0.69
CDH9-204ENST00000511822 RPIAP49247 311 aa10.74□□□□□ -0.69
CDH9-204ENST00000511822 BEGAINQ9BUH8 593 aa10.74□□□□□ -0.69
CDH9-204ENST00000511822 CDC42BPBQ9Y5S2 1711 aa10.74□□□□□ -0.69
CDH9-204ENST00000511822 PTPRKQ15262 1439 aa10.74□□□□□ -0.69
CDH9-204ENST00000511822 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
CDH9-204ENST00000511822 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
CDH9-204ENST00000511822 FDX1P10109 184 aa10.73□□□□□ -0.69
CDH9-204ENST00000511822 MS4A1P11836 297 aa10.73□□□□□ -0.69
CDH9-204ENST00000511822 PCDHGC3Q9UN70 934 aa10.73□□□□□ -0.69
CDH9-204ENST00000511822 CPS1P31327 1500 aa10.73□□□□□ -0.69
CDH9-204ENST00000511822 PRR20EP86478 221 aa10.72□□□□□ -0.69
CDH9-204ENST00000511822 PRR20CP86479 221 aa10.72□□□□□ -0.69
CDH9-204ENST00000511822 PRR20DP86480 221 aa10.72□□□□□ -0.69
CDH9-204ENST00000511822 PRR20BP86481 221 aa10.72□□□□□ -0.69
CDH9-204ENST00000511822 PRR20AP86496 221 aa10.72□□□□□ -0.69
CDH9-204ENST00000511822 PDE4DQ08499 809 aa10.72□□□□□ -0.69
CDH9-204ENST00000511822 SYMPKQ92797 1274 aaKnown RBP10.72□□□□□ -0.69
CDH9-204ENST00000511822 CCDC18Q5T9S5 1454 aa10.72□□□□□ -0.69
CDH9-204ENST00000511822 MOXD2PA6NHM9 499 aa10.71□□□□□ -0.69
CDH9-204ENST00000511822 LCE2BO14633 110 aa10.71□□□□□ -0.69
CDH9-204ENST00000511822 A2ML1A8K2U0 1454 aa10.7□□□□□ -0.7
CDH9-204ENST00000511822 NDUFV2P19404 249 aa10.7□□□□□ -0.7
CDH9-204ENST00000511822 HSPA1LP34931 641 aa10.7□□□□□ -0.7
CDH9-204ENST00000511822 KIAA1107Q9UPP5 1409 aa10.69□□□□□ -0.7
CDH9-204ENST00000511822 GDF9O60383 454 aa10.69□□□□□ -0.7
CDH9-204ENST00000511822 RETREG3Q86VR2 466 aa10.69□□□□□ -0.7
CDH9-204ENST00000511822 INO80Q9ULG1 1556 aaPredicted RBP10.69□□□□□ -0.7
CDH9-204ENST00000511822 ATP7AQ04656 1500 aa10.68□□□□□ -0.7
CDH9-204ENST00000511822 SYCP2Q9BX26 1530 aa10.68□□□□□ -0.7
CDH9-204ENST00000511822 TBC1D2Q9BYX2 928 aa10.68□□□□□ -0.7
CDH9-204ENST00000511822 ATP1B4Q9UN42 357 aaPredicted RBP10.68□□□□□ -0.7
CDH9-204ENST00000511822 A2MP01023 1474 aa10.68□□□□□ -0.7
CDH9-204ENST00000511822 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
CDH9-204ENST00000511822 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 SPAG9O60271 1321 aaKnown RBP10.67□□□□□ -0.7
CDH9-204ENST00000511822 C6orf229H3BNL8 230 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 TNFRSF10AO00220 468 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 TOM1O60784 492 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 CD2BP2O95400 341 aaKnown RBP10.67□□□□□ -0.7
CDH9-204ENST00000511822 JUNDP17535 347 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 PKD2L1Q9P0L9 805 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 NEURL4Q96JN8 1562 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 SHANK2Q9UPX8 1470 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
CDH9-204ENST00000511822 ZBTB24O43167 697 aaPredicted RBP10.66□□□□□ -0.7
CDH9-204ENST00000511822 DIXDC1Q155Q3 683 aa10.66□□□□□ -0.7
CDH9-204ENST00000511822 TRAF7Q6Q0C0 670 aa10.66□□□□□ -0.7
CDH9-204ENST00000511822 FAM135AQ9P2D6 1515 aa10.66□□□□□ -0.7
CDH9-204ENST00000511822 CLTCQ00610 1675 aaKnown RBP10.66□□□□□ -0.7
CDH9-204ENST00000511822 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
CDH9-204ENST00000511822 CDC42BPAQ5VT25 1732 aa10.65□□□□□ -0.7
CDH9-204ENST00000511822 GJA5P36382 358 aa10.65□□□□□ -0.7
CDH9-204ENST00000511822 ALKQ9UM73 1620 aa10.65□□□□□ -0.7
CDH9-204ENST00000511822 GPATCH8Q9UKJ3 1502 aaKnown RBP10.64□□□□□ -0.71
CDH9-204ENST00000511822 RSBN1LQ6PCB5 846 aaPredicted RBP10.64□□□□□ -0.71
CDH9-204ENST00000511822 VWDEQ8N2E2 1590 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms