RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 TOMM22Q9NS69 142 aa8.86□□□□□ -0.99
CPNE4-208ENST00000511604 AK9Q5TCS8 1911 aa8.86□□□□□ -0.99
CPNE4-208ENST00000511604 RAD50Q92878 1312 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 FOXD4L5Q5VV16 416 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-208ENST00000511604 TICAM2Q86XR7 235 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 KIAA1524Q8TCG1 905 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 FOXD4L4Q8WXT5 416 aaPredicted RBP8.85□□□□□ -0.99
CPNE4-208ENST00000511604 KIF16BQ96L93 1317 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
CPNE4-208ENST00000511604 SRPK2P78362 688 aaKnown RBP8.85□□□□□ -0.99
CPNE4-208ENST00000511604 MUM1L1Q5H9M0 696 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 NFATC2IPQ8NCF5 419 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 NOL10Q9BSC4 688 aaKnown RBP8.85□□□□□ -0.99
CPNE4-208ENST00000511604 ST7Q9NRC1 585 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 ZNF446Q9NWS9 450 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 DONSONQ9NYP3 566 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 POLKQ9UBT6 870 aa8.85□□□□□ -0.99
CPNE4-208ENST00000511604 SYNJ2O15056 1496 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 MYO1CO00159 1063 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 NUCB2P80303 420 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 C10orf67Q8IYJ2 551 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 RWDD1Q9H446 243 aaPredicted RBP8.84□□□□□ -0.99
CPNE4-208ENST00000511604 TSPY26PQ9H489 355 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
CPNE4-208ENST00000511604 IRF6O14896 467 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 TRIM66O15016 1216 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 SYT10Q6XYQ8 523 aa8.84□□□□□ -0.99
CPNE4-208ENST00000511604 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.84□□□□□ -0.99
CPNE4-208ENST00000511604 NUP155O75694 1391 aa8.84□□□□□ -1
CPNE4-208ENST00000511604 EPRSP07814 1512 aaKnown RBP8.83□□□□□ -1
CPNE4-208ENST00000511604 CYP2E1P05181 493 aaPredicted RBP8.83□□□□□ -1
CPNE4-208ENST00000511604 NAA30Q147X3 362 aaPredicted RBP8.83□□□□□ -1
CPNE4-208ENST00000511604 ZNF397Q8NF99 534 aaPredicted RBP8.83□□□□□ -1
CPNE4-208ENST00000511604 LNPKQ9C0E8 428 aa8.83□□□□□ -1
CPNE4-208ENST00000511604 JRKLQ9Y4A0 524 aa8.83□□□□□ -1
CPNE4-208ENST00000511604 ANKRD30AQ9BXX3 1397 aa8.83□□□□□ -1
CPNE4-208ENST00000511604 KIF13AQ9H1H9 1805 aa8.83□□□□□ -1
CPNE4-208ENST00000511604 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
CPNE4-208ENST00000511604 KIF1BPQ96EK5 621 aa8.83□□□□□ -1
CPNE4-208ENST00000511604 KNSTRNQ9Y448 316 aa8.83□□□□□ -1
CPNE4-208ENST00000511604 CFAP65Q6ZU64 1925 aaKnown RBP8.83□□□□□ -1
CPNE4-208ENST00000511604 COL17A1Q9UMD9 1497 aaPredicted RBP8.83□□□□□ -1
CPNE4-208ENST00000511604 SMTNL1A8MU46 457 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 GOLIM4O00461 696 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 RBM6P78332 1123 aaKnown RBP8.82□□□□□ -1
CPNE4-208ENST00000511604 ZGPATQ8N5A5 531 aaKnown RBP8.82□□□□□ -1
CPNE4-208ENST00000511604 RNF217Q8TC41 542 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 USP25Q9UHP3 1055 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 ADCY5O95622 1261 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 PLCD4Q9BRC7 762 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 PYCARDQ9ULZ3 195 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 ZDHHC9Q9Y397 364 aa8.82□□□□□ -1
CPNE4-208ENST00000511604 POLA1P09884 1462 aaPredicted RBP8.81□□□□□ -1
CPNE4-208ENST00000511604 KIF1CO43896 1103 aaKnown RBP8.81□□□□□ -1
CPNE4-208ENST00000511604 UVSSAQ2YD98 709 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 CHMP7Q8WUX9 453 aaPredicted RBP8.81□□□□□ -1
CPNE4-208ENST00000511604 DRC1Q96MC2 740 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 ATG3Q9NT62 314 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 ERBINQ96RT1 1412 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 MAP2K1Q02750 393 aaPredicted RBP8.81□□□□□ -1
CPNE4-208ENST00000511604 TSGA10IPQ3SY00 556 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 FAM184AQ8NB25 1140 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 CXorf56Q9H5V9 222 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 STK26Q9P289 416 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 LCMT1Q9UIC8 334 aa8.81□□□□□ -1
CPNE4-208ENST00000511604 MBD3O95983 291 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 TDO2P48775 406 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 DNAJC21Q5F1R6 531 aaKnown RBP8.8□□□□□ -1
CPNE4-208ENST00000511604 TXLNBQ8N3L3 684 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 GOLGA6L1Q8N7Z2 621 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 RAI14Q9P0K7 980 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 SH3BP1Q9Y3L3 701 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 CCDC9Q9Y3X0 531 aaKnown RBP8.8□□□□□ -1
CPNE4-208ENST00000511604 SAMD9Q5K651 1589 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 PRAG1Q86YV5 1406 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 MVPQ14764 893 aaKnown RBP8.8□□□□□ -1
CPNE4-208ENST00000511604 TPRNQ4KMQ1 711 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 KRBA2Q6ZNG9 492 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 NEK11Q8NG66 645 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 MED4Q9NPJ6 270 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 FBXO3Q9UK99 471 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 SUFUQ9UMX1 484 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 SHROOM2Q13796 1616 aa8.8□□□□□ -1
CPNE4-208ENST00000511604 FAM135AQ9P2D6 1515 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 ATP2B1P20020 1258 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 TMF1P82094 1093 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 SEMA3FQ13275 785 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 SART3Q15020 963 aaKnown RBP8.79□□□□□ -1
CPNE4-208ENST00000511604 WDR7Q9Y4E6 1490 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 TDRD9Q8NDG6 1382 aaKnown RBP8.79□□□□□ -1
CPNE4-208ENST00000511604 A0A1B0GUL7 405 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 FOXD4L6Q3SYB3 417 aaPredicted RBP8.79□□□□□ -1
CPNE4-208ENST00000511604 CDCA8Q53HL2 280 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 FOXD4L3Q6VB84 417 aaPredicted RBP8.79□□□□□ -1
CPNE4-208ENST00000511604 CCDC112Q8NEF3 446 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 MNS1Q8NEH6 495 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 SGSM3Q96HU1 749 aa8.79□□□□□ -1
CPNE4-208ENST00000511604 DNMT1P26358 1616 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms