RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SLFN5Q08AF3 891 aa19.95■□□□□ 0.78
SCLT1-209ENST00000511426 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
SCLT1-209ENST00000511426 ERICH6BQ5W0A0 696 aa19.94■□□□□ 0.78
SCLT1-209ENST00000511426 BRINP3Q76B58 766 aa19.94■□□□□ 0.78
SCLT1-209ENST00000511426 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
SCLT1-209ENST00000511426 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
SCLT1-209ENST00000511426 HOXC9P31274 260 aa19.94■□□□□ 0.78
SCLT1-209ENST00000511426 TMPOP42166 694 aaKnown RBP19.94■□□□□ 0.78
SCLT1-209ENST00000511426 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
SCLT1-209ENST00000511426 ABCC6O95255 1503 aa19.93■□□□□ 0.78
SCLT1-209ENST00000511426 PRKAR2BP31323 418 aa19.93■□□□□ 0.78
SCLT1-209ENST00000511426 HSP90AB2PQ58FF8 381 aa19.93■□□□□ 0.78
SCLT1-209ENST00000511426 KDRP35968 1356 aa19.93■□□□□ 0.78
SCLT1-209ENST00000511426 GCP02774 474 aa19.92■□□□□ 0.78
SCLT1-209ENST00000511426 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
SCLT1-209ENST00000511426 IP6K1Q92551 441 aa19.92■□□□□ 0.78
SCLT1-209ENST00000511426 LTBP4Q8N2S1 1624 aa19.92■□□□□ 0.78
SCLT1-209ENST00000511426 IL16Q14005 1332 aa19.92■□□□□ 0.78
SCLT1-209ENST00000511426 NUTM2GQ5VZR2 741 aa19.91■□□□□ 0.78
SCLT1-209ENST00000511426 CDCA7LQ96GN5 454 aa19.91■□□□□ 0.78
SCLT1-209ENST00000511426 SPATA31A3Q5VYP0 1347 aa19.91■□□□□ 0.78
SCLT1-209ENST00000511426 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
SCLT1-209ENST00000511426 SOX12O15370 315 aa19.91■□□□□ 0.78
SCLT1-209ENST00000511426 LMOD3Q0VAK6 560 aa19.91■□□□□ 0.78
SCLT1-209ENST00000511426 LTN1O94822 1766 aa19.9■□□□□ 0.78
SCLT1-209ENST00000511426 SOS2Q07890 1332 aaPredicted RBP19.9■□□□□ 0.78
SCLT1-209ENST00000511426 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
SCLT1-209ENST00000511426 CALD1Q05682 793 aaKnown RBP19.89■□□□□ 0.77
SCLT1-209ENST00000511426 ARHGEF25Q86VW2 580 aa19.89■□□□□ 0.77
SCLT1-209ENST00000511426 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
SCLT1-209ENST00000511426 XPCQ01831 940 aaPredicted RBP19.88■□□□□ 0.77
SCLT1-209ENST00000511426 NFE2L2Q16236 605 aa19.88■□□□□ 0.77
SCLT1-209ENST00000511426 NHSL1Q5SYE7 1610 aa19.88■□□□□ 0.77
SCLT1-209ENST00000511426 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
SCLT1-209ENST00000511426 HMOX1P09601 288 aa19.87■□□□□ 0.77
SCLT1-209ENST00000511426 RIPK4P57078 832 aa19.86■□□□□ 0.77
SCLT1-209ENST00000511426 SULT6B1Q6IMI4 303 aa19.86■□□□□ 0.77
SCLT1-209ENST00000511426 NEUROD2Q15784 382 aa19.85■□□□□ 0.77
SCLT1-209ENST00000511426 LMOD2Q6P5Q4 547 aa19.85■□□□□ 0.77
SCLT1-209ENST00000511426 RRP7AQ9Y3A4 280 aaKnown RBP19.85■□□□□ 0.77
SCLT1-209ENST00000511426 TRIM35Q9UPQ4 493 aa19.84■□□□□ 0.77
SCLT1-209ENST00000511426 CPDO75976 1380 aa19.84■□□□□ 0.77
SCLT1-209ENST00000511426 CRYBG1Q9Y4K1 1723 aa19.84■□□□□ 0.77
SCLT1-209ENST00000511426 CT47B1P0C2W7 299 aaPredicted RBP19.83■□□□□ 0.76
SCLT1-209ENST00000511426 FKBP8Q14318 412 aa19.83■□□□□ 0.76
SCLT1-209ENST00000511426 EYA1Q99502 592 aa19.83■□□□□ 0.76
SCLT1-209ENST00000511426 NCAPD2Q15021 1401 aa19.83■□□□□ 0.76
SCLT1-209ENST00000511426 PLEKHG2Q9H7P9 1386 aa19.82■□□□□ 0.76
SCLT1-209ENST00000511426 PHACTR3Q96KR7 559 aa19.81■□□□□ 0.76
SCLT1-209ENST00000511426 AHDC1Q5TGY3 1603 aaPredicted RBP19.8■□□□□ 0.76
SCLT1-209ENST00000511426 CAMTA1Q9Y6Y1 1673 aa19.79■□□□□ 0.76
SCLT1-209ENST00000511426 AEBP1Q8IUX7 1158 aa19.79■□□□□ 0.76
SCLT1-209ENST00000511426 GAS2L2Q8NHY3 880 aa19.79■□□□□ 0.76
SCLT1-209ENST00000511426 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
SCLT1-209ENST00000511426 RRP1P56182 461 aaKnown RBP19.78■□□□□ 0.76
SCLT1-209ENST00000511426 DDX17Q92841 729 aaKnown RBP19.78■□□□□ 0.76
SCLT1-209ENST00000511426 HTATSF1O43719 755 aaKnown RBP19.78■□□□□ 0.76
SCLT1-209ENST00000511426 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.78■□□□□ 0.76
SCLT1-209ENST00000511426 FAM208AQ9UK61 1670 aaKnown RBP19.77■□□□□ 0.76
SCLT1-209ENST00000511426 IFT57Q9NWB7 429 aa19.76■□□□□ 0.75
SCLT1-209ENST00000511426 ERBB3P21860 1342 aa19.75■□□□□ 0.75
SCLT1-209ENST00000511426 GNAI1P63096 354 aa19.75■□□□□ 0.75
SCLT1-209ENST00000511426 ROBO1Q9Y6N7 1651 aa19.74■□□□□ 0.75
SCLT1-209ENST00000511426 ZNF428Q96B54 188 aa19.74■□□□□ 0.75
SCLT1-209ENST00000511426 LMO7Q8WWI1 1683 aa19.73■□□□□ 0.75
SCLT1-209ENST00000511426 COL18A1P39060 1754 aa19.73■□□□□ 0.75
SCLT1-209ENST00000511426 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
SCLT1-209ENST00000511426 ANKRD24Q8TF21 1146 aa19.73■□□□□ 0.75
SCLT1-209ENST00000511426 LRRC59Q96AG4 307 aaKnown RBP19.72■□□□□ 0.75
SCLT1-209ENST00000511426 DLG5Q8TDM6 1919 aa19.72■□□□□ 0.75
SCLT1-209ENST00000511426 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
SCLT1-209ENST00000511426 ZNF853P0CG23 659 aa19.71■□□□□ 0.75
SCLT1-209ENST00000511426 ZC3H6P61129 1189 aaKnown RBP19.71■□□□□ 0.75
SCLT1-209ENST00000511426 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
SCLT1-209ENST00000511426 LTV1Q96GA3 475 aaPredicted RBP19.71■□□□□ 0.75
SCLT1-209ENST00000511426 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
SCLT1-209ENST00000511426 CFAP44Q96MT7 982 aa19.71■□□□□ 0.75
SCLT1-209ENST00000511426 TOM1O60784 492 aa19.7■□□□□ 0.74
SCLT1-209ENST00000511426 AMOTQ4VCS5 1084 aa19.7■□□□□ 0.74
SCLT1-209ENST00000511426 KIAA0232Q92628 1395 aa19.69■□□□□ 0.74
SCLT1-209ENST00000511426 MTHFSDQ2M296 383 aaKnown RBP19.69■□□□□ 0.74
SCLT1-209ENST00000511426 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
SCLT1-209ENST00000511426 COL22A1Q8NFW1 1626 aaPredicted RBP19.69■□□□□ 0.74
SCLT1-209ENST00000511426 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
SCLT1-209ENST00000511426 HAP1P54257 671 aaPredicted RBP19.68■□□□□ 0.74
SCLT1-209ENST00000511426 AXIN2Q9Y2T1 843 aa19.68■□□□□ 0.74
SCLT1-209ENST00000511426 MAP3K5Q99683 1374 aa19.67■□□□□ 0.74
SCLT1-209ENST00000511426 PPP4R2Q9NY27 417 aa19.67■□□□□ 0.74
SCLT1-209ENST00000511426 GNAT3A8MTJ3 354 aa19.66■□□□□ 0.74
SCLT1-209ENST00000511426 CABLES1Q8TDN4 633 aa19.66■□□□□ 0.74
SCLT1-209ENST00000511426 BABAM1Q9NWV8 329 aa19.66■□□□□ 0.74
SCLT1-209ENST00000511426 LRRC37A3O60309 1634 aa19.66■□□□□ 0.74
SCLT1-209ENST00000511426 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
SCLT1-209ENST00000511426 PRDM11Q9NQV5 511 aa19.65■□□□□ 0.74
SCLT1-209ENST00000511426 OVOS2A0A0G2JMS6 1433 aa19.65■□□□□ 0.74
SCLT1-209ENST00000511426 RARSP54136 660 aaKnown RBP19.65■□□□□ 0.74
SCLT1-209ENST00000511426 TSR2Q969E8 191 aaKnown RBP19.64■□□□□ 0.73
SCLT1-209ENST00000511426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.737e-6■■□□□ 12.8
SCLT1-209ENST00000511426 CRB1P82279 1406 aa19.64■□□□□ 0.73
SCLT1-209ENST00000511426 EXOSC9Q06265 439 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms