RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ADAM32Q8TC27 787 aa9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 CLP1Q92989 425 aaKnown RBP9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 PCDHB9Q9Y5E1 797 aa9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 PHLDB3Q6NSJ2 640 aa9.38□□□□□ -0.91
HMGB1P47-201ENST00000511281 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
HMGB1P47-201ENST00000511281 UNC93B1Q9H1C4 597 aa9.38□□□□□ -0.91
HMGB1P47-201ENST00000511281 SSFA2P28290 1259 aa9.37□□□□□ -0.91
HMGB1P47-201ENST00000511281 CCDC27Q2M243 656 aa9.37□□□□□ -0.91
HMGB1P47-201ENST00000511281 LARP1Q6PKG0 1096 aaKnown RBP9.37□□□□□ -0.91
HMGB1P47-201ENST00000511281 DEPDC4Q8N2C3 294 aa9.37□□□□□ -0.91
HMGB1P47-201ENST00000511281 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P47-201ENST00000511281 AMOTL2Q9Y2J4 779 aa9.37□□□□□ -0.91
HMGB1P47-201ENST00000511281 COPS2P61201 443 aa9.36□□□□□ -0.91
HMGB1P47-201ENST00000511281 RASA1P20936 1047 aa9.35□□□□□ -0.91
HMGB1P47-201ENST00000511281 SWI5Q1ZZU3 235 aa9.35□□□□□ -0.91
HMGB1P47-201ENST00000511281 EML3Q32P44 896 aa9.35□□□□□ -0.91
HMGB1P47-201ENST00000511281 PTCRAQ6ISU1 281 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P47-201ENST00000511281 ANKMY2Q8IV38 441 aa9.35□□□□□ -0.91
HMGB1P47-201ENST00000511281 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P47-201ENST00000511281 TLL1O43897 1013 aa9.34□□□□□ -0.91
HMGB1P47-201ENST00000511281 ZBTB33Q86T24 672 aa9.34□□□□□ -0.91
HMGB1P47-201ENST00000511281 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
HMGB1P47-201ENST00000511281 FAM200AQ8TCP9 573 aa9.34□□□□□ -0.91
HMGB1P47-201ENST00000511281 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
HMGB1P47-201ENST00000511281 DKK1O94907 266 aa9.33□□□□□ -0.92
HMGB1P47-201ENST00000511281 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
HMGB1P47-201ENST00000511281 SIX5Q8N196 739 aa9.33□□□□□ -0.92
HMGB1P47-201ENST00000511281 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
HMGB1P47-201ENST00000511281 C1orf216Q8TAB5 229 aa9.33□□□□□ -0.92
HMGB1P47-201ENST00000511281 MTRQ99707 1265 aa9.33□□□□□ -0.92
HMGB1P47-201ENST00000511281 ARID4AP29374 1257 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 CLDN10P78369 228 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 TJAP1Q5JTD0 557 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 OGFOD1Q8N543 542 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 SLC6A16Q9GZN6 736 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 IL21Q9HBE4 155 aa9.32□□□□□ -0.92
HMGB1P47-201ENST00000511281 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P47-201ENST00000511281 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
HMGB1P47-201ENST00000511281 CCDC85AQ96PX6 553 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P47-201ENST00000511281 C1QTNF2Q9BXJ5 285 aa9.31□□□□□ -0.92
HMGB1P47-201ENST00000511281 NOD1Q9Y239 953 aa9.31□□□□□ -0.92
HMGB1P47-201ENST00000511281 ESPNB1AK53 854 aa9.3□□□□□ -0.92
HMGB1P47-201ENST00000511281 ERFEQ4G0M1 354 aa9.3□□□□□ -0.92
HMGB1P47-201ENST00000511281 RNF20Q5VTR2 975 aa9.3□□□□□ -0.92
HMGB1P47-201ENST00000511281 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P47-201ENST00000511281 FOXD4L4Q8WXT5 416 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P47-201ENST00000511281 DNAAF2Q9NVR5 837 aaKnown RBP9.3□□□□□ -0.92
HMGB1P47-201ENST00000511281 ZBTB7BO15156 539 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P47-201ENST00000511281 DPYDQ12882 1025 aa9.29□□□□□ -0.92
HMGB1P47-201ENST00000511281 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
HMGB1P47-201ENST00000511281 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
HMGB1P47-201ENST00000511281 POTEMA6NI47 508 aa9.28□□□□□ -0.92
HMGB1P47-201ENST00000511281 TSGA10IPQ3SY00 556 aa9.28□□□□□ -0.92
HMGB1P47-201ENST00000511281 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
HMGB1P47-201ENST00000511281 CCDC24Q8N4L8 307 aa9.28□□□□□ -0.92
HMGB1P47-201ENST00000511281 ZNF511Q8NB15 262 aa9.28□□□□□ -0.92
HMGB1P47-201ENST00000511281 PCDH10Q9P2E7 1040 aa9.28□□□□□ -0.92
HMGB1P47-201ENST00000511281 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
HMGB1P47-201ENST00000511281 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.93
HMGB1P47-201ENST00000511281 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
HMGB1P47-201ENST00000511281 GIGYF1O75420 1035 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P47-201ENST00000511281 ATP2B4P23634 1241 aa9.26□□□□□ -0.93
HMGB1P47-201ENST00000511281 NBPF20Q3BBV1 942 aa9.26□□□□□ -0.93
HMGB1P47-201ENST00000511281 BAP1Q92560 729 aa9.26□□□□□ -0.93
HMGB1P47-201ENST00000511281 ERCC3P19447 782 aa9.25□□□□□ -0.93
HMGB1P47-201ENST00000511281 GTF2IP78347 998 aa9.25□□□□□ -0.93
HMGB1P47-201ENST00000511281 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
HMGB1P47-201ENST00000511281 FOXJ1Q92949 421 aa9.25□□□□□ -0.93
HMGB1P47-201ENST00000511281 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
HMGB1P47-201ENST00000511281 KIAA1024Q9UPX6 916 aa9.25□□□□□ -0.93
HMGB1P47-201ENST00000511281 PCDHGA11Q9Y5H2 935 aa9.25□□□□□ -0.93
HMGB1P47-201ENST00000511281 MAGEB6P1A0A0J9YX57 407 aa9.24□□□□□ -0.93
HMGB1P47-201ENST00000511281 SOWAHDA6NJG2 315 aa9.24□□□□□ -0.93
HMGB1P47-201ENST00000511281 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
HMGB1P47-201ENST00000511281 SLC10A4Q96EP9 437 aa9.24□□□□□ -0.93
HMGB1P47-201ENST00000511281 ZNF594Q96JF6 807 aaPredicted RBP9.24□□□□□ -0.93
HMGB1P47-201ENST00000511281 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
HMGB1P47-201ENST00000511281 SEC13P55735 322 aa9.23□□□□□ -0.93
HMGB1P47-201ENST00000511281 OCLNQ16625 522 aa9.23□□□□□ -0.93
HMGB1P47-201ENST00000511281 FCF1Q9Y324 198 aaKnown RBP9.23□□□□□ -0.93
HMGB1P47-201ENST00000511281 M0R2N6 131 aa9.22□□□□□ -0.93
HMGB1P47-201ENST00000511281 RBM25P49756 843 aaKnown RBP9.22□□□□□ -0.93
HMGB1P47-201ENST00000511281 USP4Q13107 963 aa9.22□□□□□ -0.93
HMGB1P47-201ENST00000511281 DNAJC14Q6Y2X3 702 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P47-201ENST00000511281 ZNF428Q96B54 188 aa9.22□□□□□ -0.93
HMGB1P47-201ENST00000511281 EGFL7Q9UHF1 273 aa9.22□□□□□ -0.93
HMGB1P47-201ENST00000511281 S1PR4O95977 384 aa9.21□□□□□ -0.94
HMGB1P47-201ENST00000511281 SH3BP2P78314 561 aa9.21□□□□□ -0.94
HMGB1P47-201ENST00000511281 OXLD1Q5BKU9 147 aa9.21□□□□□ -0.94
HMGB1P47-201ENST00000511281 CCDC102BQ68D86 513 aa9.21□□□□□ -0.94
HMGB1P47-201ENST00000511281 CXXC1Q9P0U4 656 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P47-201ENST00000511281 LINC01559Q495D7 138 aa9.2□□□□□ -0.94
HMGB1P47-201ENST00000511281 MAP4K5Q9Y4K4 846 aa9.2□□□□□ -0.94
HMGB1P47-201ENST00000511281 RBM47A0AV96 593 aaKnown RBP9.19□□□□□ -0.94
HMGB1P47-201ENST00000511281 AGERQ15109 404 aa9.19□□□□□ -0.94
HMGB1P47-201ENST00000511281 E9PSI1 815 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms