RNA–Protein interactions for RNA: ENST00000511044.1

PCDH1-206, Transcript of protocadherin 1, humanhuman

TSL 1 (best)

Gene PCDH1, Length 2,674 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-206ENST00000511044 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-206ENST00000511044 BCAR3O75815 825 aa14.59□□□□□ -0.07
PCDH1-206ENST00000511044 CERS3Q8IU89 383 aa14.59□□□□□ -0.07
PCDH1-206ENST00000511044 A0A1W2PP64 1363 aa14.59□□□□□ -0.07
PCDH1-206ENST00000511044 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-206ENST00000511044 CLCN1P35523 988 aa14.59□□□□□ -0.07
PCDH1-206ENST00000511044 PMFBP1Q8TBY8 1022 aa14.58□□□□□ -0.08
PCDH1-206ENST00000511044 CPS1P31327 1500 aa14.58□□□□□ -0.08
PCDH1-206ENST00000511044 PRR36Q9H6K5 1346 aa14.58□□□□□ -0.08
PCDH1-206ENST00000511044 PRDM16Q9HAZ2 1276 aa14.58□□□□□ -0.08
PCDH1-206ENST00000511044 RGPD8O14715 1765 aaPredicted RBP14.57□□□□□ -0.08
PCDH1-206ENST00000511044 KNDC1Q76NI1 1749 aa14.57□□□□□ -0.08
PCDH1-206ENST00000511044 FBLN1P23142 703 aa14.57□□□□□ -0.08
PCDH1-206ENST00000511044 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
PCDH1-206ENST00000511044 PTMSP20962 102 aa14.57□□□□□ -0.08
PCDH1-206ENST00000511044 GGNBP2Q9H3C7 697 aa14.57□□□□□ -0.08
PCDH1-206ENST00000511044 PATL2C9JE40 543 aaKnown RBP14.56□□□□□ -0.08
PCDH1-206ENST00000511044 NUDT16Q96DE0 195 aaKnown RBP14.56□□□□□ -0.08
PCDH1-206ENST00000511044 DLC1Q96QB1 1528 aa14.56□□□□□ -0.08
PCDH1-206ENST00000511044 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
PCDH1-206ENST00000511044 E9PSI1 815 aa14.55□□□□□ -0.08
PCDH1-206ENST00000511044 NKTRP30414 1462 aaKnown RBP14.55□□□□□ -0.08
PCDH1-206ENST00000511044 CLGNO14967 610 aa14.55□□□□□ -0.08
PCDH1-206ENST00000511044 TECPR2O15040 1411 aa14.55□□□□□ -0.08
PCDH1-206ENST00000511044 PPIP5K1Q6PFW1 1433 aa14.54□□□□□ -0.08
PCDH1-206ENST00000511044 SOX12O15370 315 aa14.54□□□□□ -0.08
PCDH1-206ENST00000511044 IGHDP01880 384 aa14.54□□□□□ -0.08
PCDH1-206ENST00000511044 XRCC6P12956 609 aaKnown RBP eCLIP14.54□□□□□ -0.08
PCDH1-206ENST00000511044 CHD2O14647 1828 aaKnown RBP14.54□□□□□ -0.08
PCDH1-206ENST00000511044 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
PCDH1-206ENST00000511044 XRN1Q8IZH2 1706 aaKnown RBP14.53□□□□□ -0.08
PCDH1-206ENST00000511044 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
PCDH1-206ENST00000511044 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.08
PCDH1-206ENST00000511044 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.09
PCDH1-206ENST00000511044 NPC1L1Q9UHC9 1359 aa14.52□□□□□ -0.09
PCDH1-206ENST00000511044 SLKQ9H2G2 1235 aaPredicted RBP14.52□□□□□ -0.09
PCDH1-206ENST00000511044 CD163L1Q9NR16 1453 aa14.52□□□□□ -0.09
PCDH1-206ENST00000511044 PANK2Q9BZ23 570 aa14.51□□□□□ -0.09
PCDH1-206ENST00000511044 DIP2AQ14689 1571 aa14.51□□□□□ -0.09
PCDH1-206ENST00000511044 ANKRD36BQ8N2N9 1353 aa14.51□□□□□ -0.09
PCDH1-206ENST00000511044 GOLGA6L3A6NEY3 463 aa14.51□□□□□ -0.09
PCDH1-206ENST00000511044 NALCNQ8IZF0 1738 aa14.51□□□□□ -0.09
PCDH1-206ENST00000511044 ATP7BP35670 1465 aa14.51□□□□□ -0.09
PCDH1-206ENST00000511044 MORC1Q86VD1 984 aa14.5□□□□□ -0.09
PCDH1-206ENST00000511044 PROSER2Q86WR7 435 aaPredicted RBP14.5□□□□□ -0.09
PCDH1-206ENST00000511044 TMEM51Q9NW97 253 aa14.5□□□□□ -0.09
PCDH1-206ENST00000511044 COG6Q9Y2V7 657 aa14.5□□□□□ -0.09
PCDH1-206ENST00000511044 MMP14P50281 582 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
PCDH1-206ENST00000511044 CGNL1Q0VF96 1302 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 HDGFL2Q7Z4V5 671 aaPredicted RBP14.49□□□□□ -0.09
PCDH1-206ENST00000511044 NME9Q86XW9 330 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 PANK1Q8TE04 598 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 TERF2IPQ9NYB0 399 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 STRCP1A6NGW2 1772 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 PTCH1Q13635 1447 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 PDE3AQ14432 1141 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 NUTM2GQ5VZR2 741 aa14.49□□□□□ -0.09
PCDH1-206ENST00000511044 CWC22Q9HCG8 908 aaKnown RBP14.49□□□□□ -0.09
PCDH1-206ENST00000511044 STRCQ7RTU9 1775 aa14.48□□□□□ -0.09
PCDH1-206ENST00000511044 NEUROD2Q15784 382 aa14.48□□□□□ -0.09
PCDH1-206ENST00000511044 ZNF622Q969S3 477 aaKnown RBP eCLIP14.48□□□□□ -0.09
PCDH1-206ENST00000511044 CLUAP1Q96AJ1 413 aa14.48□□□□□ -0.09
PCDH1-206ENST00000511044 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
PCDH1-206ENST00000511044 ZNF335Q9H4Z2 1342 aaPredicted RBP14.48□□□□□ -0.09
PCDH1-206ENST00000511044 ZNF526Q8TF50 670 aaPredicted RBP14.48□□□□□ -0.09
PCDH1-206ENST00000511044 ACEP12821 1306 aa14.47□□□□□ -0.09
PCDH1-206ENST00000511044 SETQ01105 290 aaPredicted RBP14.47□□□□□ -0.09
PCDH1-206ENST00000511044 NGEFQ8N5V2 710 aa14.47□□□□□ -0.09
PCDH1-206ENST00000511044 USP32Q8NFA0 1604 aa14.47□□□□□ -0.09
PCDH1-206ENST00000511044 SEC24BO95487 1268 aa14.46□□□□□ -0.09
PCDH1-206ENST00000511044 NGDNQ8NEJ9 315 aaKnown RBP14.46□□□□□ -0.09
PCDH1-206ENST00000511044 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.1
PCDH1-206ENST00000511044 FSD2A1L4K1 749 aa14.46□□□□□ -0.1
PCDH1-206ENST00000511044 FYB1O15117 783 aa14.46□□□□□ -0.1
PCDH1-206ENST00000511044 GZF1Q9H116 711 aaPredicted RBP14.46□□□□□ -0.1
PCDH1-206ENST00000511044 IRX3P78415 501 aaPredicted RBP14.45□□□□□ -0.1
PCDH1-206ENST00000511044 BECN1Q14457 450 aa14.45□□□□□ -0.1
PCDH1-206ENST00000511044 CC2D2BQ6DHV5 1058 aa14.45□□□□□ -0.1
PCDH1-206ENST00000511044 USP19O94966 1318 aa14.45□□□□□ -0.1
PCDH1-206ENST00000511044 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
PCDH1-206ENST00000511044 DDX17Q92841 729 aaKnown RBP14.45□□□□□ -0.1
PCDH1-206ENST00000511044 ORAI2Q96SN7 254 aa14.44□□□□□ -0.1
PCDH1-206ENST00000511044 HDAC5Q9UQL6 1122 aa14.44□□□□□ -0.1
PCDH1-206ENST00000511044 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
PCDH1-206ENST00000511044 SIRT1Q96EB6 747 aa14.44□□□□□ -0.1
PCDH1-206ENST00000511044 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
PCDH1-206ENST00000511044 TMEM94Q12767 1356 aa14.43□□□□□ -0.1
PCDH1-206ENST00000511044 PIK3R4Q99570 1358 aa14.43□□□□□ -0.1
PCDH1-206ENST00000511044 PHF14O94880 888 aa14.43□□□□□ -0.1
PCDH1-206ENST00000511044 PDCL3Q9H2J4 239 aa14.43□□□□□ -0.1
PCDH1-206ENST00000511044 OS9Q13438 667 aaPredicted RBP14.42□□□□□ -0.1
PCDH1-206ENST00000511044 NINLQ9Y2I6 1382 aa14.42□□□□□ -0.1
PCDH1-206ENST00000511044 ADGRB2O60241 1585 aa14.42□□□□□ -0.1
PCDH1-206ENST00000511044 ESPNB1AK53 854 aa14.42□□□□□ -0.1
PCDH1-206ENST00000511044 MTHFSP49914 203 aa14.42□□□□□ -0.1
PCDH1-206ENST00000511044 ANTXR1Q9H6X2 564 aa14.41□□□□□ -0.1
PCDH1-206ENST00000511044 RRS1Q15050 365 aaKnown RBP14.41□□□□□ -0.1
PCDH1-206ENST00000511044 CDC42BPGQ6DT37 1551 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms