RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
TRIO-217ENST00000511019 QRICH2Q9H0J4 1663 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 KCNQ2O43526 872 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 MARCH10Q8NA82 808 aaPredicted RBP11.85□□□□□ -0.51
TRIO-217ENST00000511019 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 PPP1R1BQ9UD71 204 aaPredicted RBP11.85□□□□□ -0.51
TRIO-217ENST00000511019 SLIT3O75094 1523 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 OVOS2A0A0G2JMS6 1433 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 OVOS2A0A0J9YW53 1432 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 OVOS2Q6IE36 1432 aa11.85□□□□□ -0.51
TRIO-217ENST00000511019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRIO-217ENST00000511019 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
TRIO-217ENST00000511019 PTF1AQ7RTS3 328 aa11.83□□□□□ -0.52
TRIO-217ENST00000511019 HDGFL2Q7Z4V5 671 aaPredicted RBP11.83□□□□□ -0.52
TRIO-217ENST00000511019 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
TRIO-217ENST00000511019 PROM2Q8N271 834 aa11.81□□□□□ -0.52
TRIO-217ENST00000511019 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
TRIO-217ENST00000511019 NLRP2Q9NX02 1062 aa11.81□□□□□ -0.52
TRIO-217ENST00000511019 TRPM1Q7Z4N2 1603 aa11.81□□□□□ -0.52
TRIO-217ENST00000511019 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
TRIO-217ENST00000511019 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
TRIO-217ENST00000511019 PARP4Q9UKK3 1724 aaKnown RBP11.8□□□□□ -0.52
TRIO-217ENST00000511019 TXNRD1Q16881 649 aa11.8□□□□□ -0.52
TRIO-217ENST00000511019 NME9Q86XW9 330 aa11.8□□□□□ -0.52
TRIO-217ENST00000511019 TERF2IPQ9NYB0 399 aa11.8□□□□□ -0.52
TRIO-217ENST00000511019 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
TRIO-217ENST00000511019 BCL9O00512 1426 aa11.79□□□□□ -0.52
TRIO-217ENST00000511019 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
TRIO-217ENST00000511019 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
TRIO-217ENST00000511019 STK32BQ9NY57 414 aa11.79□□□□□ -0.52
TRIO-217ENST00000511019 COL18A1P39060 1754 aa11.79□□□□□ -0.52
TRIO-217ENST00000511019 SBNO2Q9Y2G9 1366 aa11.79□□□□□ -0.52
TRIO-217ENST00000511019 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
TRIO-217ENST00000511019 TONSLQ96HA7 1378 aa11.78□□□□□ -0.52
TRIO-217ENST00000511019 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
TRIO-217ENST00000511019 IL2RBP14784 551 aa11.77□□□□□ -0.53
TRIO-217ENST00000511019 YY1P25490 414 aa11.77□□□□□ -0.53
TRIO-217ENST00000511019 SLC15A2Q16348 729 aa11.77□□□□□ -0.53
TRIO-217ENST00000511019 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
TRIO-217ENST00000511019 RREB1Q92766 1687 aa11.77□□□□□ -0.53
TRIO-217ENST00000511019 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
TRIO-217ENST00000511019 ACSBG1Q96GR2 724 aa11.76□□□□□ -0.53
TRIO-217ENST00000511019 PDGFDQ9GZP0 370 aaPredicted RBP11.76□□□□□ -0.53
TRIO-217ENST00000511019 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
TRIO-217ENST00000511019 NUP188Q5SRE5 1749 aa11.76□□□□□ -0.53
TRIO-217ENST00000511019 ERBB3P21860 1342 aa11.76□□□□□ -0.53
TRIO-217ENST00000511019 PEAK1Q9H792 1746 aa11.75□□□□□ -0.53
TRIO-217ENST00000511019 IP6K1Q92551 441 aa11.75□□□□□ -0.53
TRIO-217ENST00000511019 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
TRIO-217ENST00000511019 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
TRIO-217ENST00000511019 NFAT5O94916 1531 aa11.74□□□□□ -0.53
TRIO-217ENST00000511019 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
TRIO-217ENST00000511019 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
TRIO-217ENST00000511019 EDC4Q6P2E9 1401 aaKnown RBP11.73□□□□□ -0.53
TRIO-217ENST00000511019 DDX54Q8TDD1 881 aaKnown RBP11.73□□□□□ -0.53
TRIO-217ENST00000511019 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
TRIO-217ENST00000511019 COG3Q96JB2 828 aa11.73□□□□□ -0.53
TRIO-217ENST00000511019 CD163L1Q9NR16 1453 aa11.73□□□□□ -0.53
TRIO-217ENST00000511019 MTFR1LQ9H019 292 aa11.72□□□□□ -0.53
TRIO-217ENST00000511019 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
TRIO-217ENST00000511019 ABCC6O95255 1503 aa11.71□□□□□ -0.53
TRIO-217ENST00000511019 TNS2Q63HR2 1409 aa11.71□□□□□ -0.53
TRIO-217ENST00000511019 A0A1W2PP64 1363 aa11.71□□□□□ -0.53
TRIO-217ENST00000511019 PTGER2P43116 358 aa11.71□□□□□ -0.53
TRIO-217ENST00000511019 AMPHP49418 695 aa11.71□□□□□ -0.53
TRIO-217ENST00000511019 TESK2Q96S53 571 aa11.71□□□□□ -0.53
TRIO-217ENST00000511019 SBF2Q86WG5 1849 aa11.71□□□□□ -0.54
TRIO-217ENST00000511019 SYT17Q9BSW7 474 aa11.7□□□□□ -0.54
TRIO-217ENST00000511019 FBLN1P23142 703 aa11.69□□□□□ -0.54
TRIO-217ENST00000511019 RGPD3A6NKT7 1758 aaPredicted RBP11.69□□□□□ -0.54
TRIO-217ENST00000511019 RGPD4Q7Z3J3 1758 aa11.69□□□□□ -0.54
TRIO-217ENST00000511019 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
TRIO-217ENST00000511019 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
TRIO-217ENST00000511019 HOXC9P31274 260 aa11.68□□□□□ -0.54
TRIO-217ENST00000511019 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
TRIO-217ENST00000511019 TMF1P82094 1093 aa11.68□□□□□ -0.54
TRIO-217ENST00000511019 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
TRIO-217ENST00000511019 ZCRB1Q8TBF4 217 aaKnown RBP11.68□□□□□ -0.54
TRIO-217ENST00000511019 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
TRIO-217ENST00000511019 ARXQ96QS3 562 aa11.68□□□□□ -0.54
TRIO-217ENST00000511019 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
TRIO-217ENST00000511019 LRRC4BQ9NT99 713 aa11.67□□□□□ -0.54
TRIO-217ENST00000511019 WNK3Q9BYP7 1800 aa11.66□□□□□ -0.54
TRIO-217ENST00000511019 FYB1O15117 783 aa11.66□□□□□ -0.54
TRIO-217ENST00000511019 SLC16A10Q8TF71 515 aa11.66□□□□□ -0.54
TRIO-217ENST00000511019 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
TRIO-217ENST00000511019 GGNBP2Q9H3C7 697 aa11.66□□□□□ -0.54
TRIO-217ENST00000511019 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
TRIO-217ENST00000511019 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
TRIO-217ENST00000511019 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
TRIO-217ENST00000511019 ANKRD36BQ8N2N9 1353 aa11.65□□□□□ -0.55
TRIO-217ENST00000511019 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
TRIO-217ENST00000511019 RRS1Q15050 365 aaKnown RBP11.64□□□□□ -0.55
TRIO-217ENST00000511019 ZNF827Q17R98 1081 aa11.64□□□□□ -0.55
TRIO-217ENST00000511019 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
TRIO-217ENST00000511019 RAPGEF4Q8WZA2 1011 aa11.64□□□□□ -0.55
TRIO-217ENST00000511019 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
TRIO-217ENST00000511019 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
TRIO-217ENST00000511019 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms