RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 CYP4X1Q8N118 509 aa8.21□□□□□ -1.1
MBD4-209ENST00000511009 MAP10Q9P2G4 905 aa8.21□□□□□ -1.1
MBD4-209ENST00000511009 PALM3A6NDB9 673 aaPredicted RBP8.2□□□□□ -1.1
MBD4-209ENST00000511009 POTECB2RU33 542 aa8.2□□□□□ -1.1
MBD4-209ENST00000511009 NPM2Q86SE8 214 aaKnown RBP8.19□□□□□ -1.1
MBD4-209ENST00000511009 ZNF511Q8NB15 262 aa8.19□□□□□ -1.1
MBD4-209ENST00000511009 BAP1Q92560 729 aa8.19□□□□□ -1.1
MBD4-209ENST00000511009 TFIP11Q9UBB9 837 aaKnown RBP8.19□□□□□ -1.1
MBD4-209ENST00000511009 DACH1Q9UI36 760 aa8.19□□□□□ -1.1
MBD4-209ENST00000511009 USTQ9Y2C2 406 aa8.18□□□□□ -1.1
MBD4-209ENST00000511009 PATL2C9JE40 543 aaKnown RBP8.17□□□□□ -1.1
MBD4-209ENST00000511009 NR1H3Q13133 447 aa8.17□□□□□ -1.1
MBD4-209ENST00000511009 TTC24A2A3L6 582 aaPredicted RBP8.16□□□□□ -1.1
MBD4-209ENST00000511009 LINC01559Q495D7 138 aa8.16□□□□□ -1.1
MBD4-209ENST00000511009 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
MBD4-209ENST00000511009 HPS1Q92902 700 aa8.16□□□□□ -1.1
MBD4-209ENST00000511009 UCN2Q96RP3 112 aa8.16□□□□□ -1.1
MBD4-209ENST00000511009 ZBBXA8MT70 800 aa8.15□□□□□ -1.1
MBD4-209ENST00000511009 CTC1Q2NKJ3 1217 aa8.15□□□□□ -1.1
MBD4-209ENST00000511009 CDCA8Q53HL2 280 aa8.15□□□□□ -1.1
MBD4-209ENST00000511009 MPNDQ8N594 471 aa8.15□□□□□ -1.1
MBD4-209ENST00000511009 FKBPLQ9UIM3 349 aa8.15□□□□□ -1.1
MBD4-209ENST00000511009 CTHP32929 405 aa8.14□□□□□ -1.11
MBD4-209ENST00000511009 TMCO4Q5TGY1 634 aa8.14□□□□□ -1.11
MBD4-209ENST00000511009 GZF1Q9H116 711 aaPredicted RBP8.14□□□□□ -1.11
MBD4-209ENST00000511009 MAFBQ9Y5Q3 323 aaPredicted RBP8.14□□□□□ -1.11
MBD4-209ENST00000511009 ZC3H4Q9UPT8 1303 aaKnown RBP8.13□□□□□ -1.11
MBD4-209ENST00000511009 ATP9BO43861 1147 aa8.13□□□□□ -1.11
MBD4-209ENST00000511009 FBXO45P0C2W1 286 aa8.13□□□□□ -1.11
MBD4-209ENST00000511009 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
MBD4-209ENST00000511009 TBC1D9Q6ZT07 1266 aa8.13□□□□□ -1.11
MBD4-209ENST00000511009 EHBP1Q8NDI1 1231 aa8.13□□□□□ -1.11
MBD4-209ENST00000511009 FOXJ1Q92949 421 aa8.13□□□□□ -1.11
MBD4-209ENST00000511009 BRD1O95696 1058 aa8.12□□□□□ -1.11
MBD4-209ENST00000511009 SRPK2P78362 688 aaKnown RBP8.12□□□□□ -1.11
MBD4-209ENST00000511009 SH3RF1Q7Z6J0 888 aa8.12□□□□□ -1.11
MBD4-209ENST00000511009 TLL2Q9Y6L7 1015 aa8.12□□□□□ -1.11
MBD4-209ENST00000511009 AXIN1O15169 862 aa8.11□□□□□ -1.11
MBD4-209ENST00000511009 ALDH1A1P00352 501 aa8.11□□□□□ -1.11
MBD4-209ENST00000511009 VARSP26640 1264 aaKnown RBP8.11□□□□□ -1.11
MBD4-209ENST00000511009 KCNA1Q09470 495 aa8.11□□□□□ -1.11
MBD4-209ENST00000511009 C1QTNF2Q9BXJ5 285 aa8.11□□□□□ -1.11
MBD4-209ENST00000511009 VRTNQ9H8Y1 702 aa8.11□□□□□ -1.11
MBD4-209ENST00000511009 ATG7O95352 703 aa8.1□□□□□ -1.11
MBD4-209ENST00000511009 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
MBD4-209ENST00000511009 ARMC2Q8NEN0 867 aa8.1□□□□□ -1.11
MBD4-209ENST00000511009 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
MBD4-209ENST00000511009 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
MBD4-209ENST00000511009 SKIP12755 728 aa8.09□□□□□ -1.11
MBD4-209ENST00000511009 PTK2Q05397 1052 aa8.09□□□□□ -1.11
MBD4-209ENST00000511009 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
MBD4-209ENST00000511009 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
MBD4-209ENST00000511009 GMPR2Q9P2T1 348 aaKnown RBP8.08□□□□□ -1.12
MBD4-209ENST00000511009 NBPF14Q5TI25 921 aa8.07□□□□□ -1.12
MBD4-209ENST00000511009 NFATC2IPQ8NCF5 419 aa8.07□□□□□ -1.12
MBD4-209ENST00000511009 GPKOWQ92917 476 aaPredicted RBP eCLIP8.07□□□□□ -1.12
MBD4-209ENST00000511009 OCSTAMPQ9BR26 566 aa8.07□□□□□ -1.12
MBD4-209ENST00000511009 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
MBD4-209ENST00000511009 PIK3CDO00329 1044 aa8.06□□□□□ -1.12
MBD4-209ENST00000511009 GRM5P41594 1212 aa8.06□□□□□ -1.12
MBD4-209ENST00000511009 SLFNL1Q499Z3 407 aa8.06□□□□□ -1.12
MBD4-209ENST00000511009 ZNF775Q96BV0 537 aaPredicted RBP8.06□□□□□ -1.12
MBD4-209ENST00000511009 GPSM3Q9Y4H4 160 aa8.06□□□□□ -1.12
MBD4-209ENST00000511009 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 USP17L5A8MUK1 530 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 MFAP1P55081 439 aaKnown RBP8.05□□□□□ -1.12
MBD4-209ENST00000511009 MCCD1P59942 119 aaPredicted RBP8.05□□□□□ -1.12
MBD4-209ENST00000511009 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
MBD4-209ENST00000511009 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 PDXDC2PQ6P474 469 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
MBD4-209ENST00000511009 PCDHB9Q9Y5E1 797 aa8.05□□□□□ -1.12
MBD4-209ENST00000511009 ADH1CP00326 375 aa8.04□□□□□ -1.12
MBD4-209ENST00000511009 TRIM46Q7Z4K8 759 aa8.04□□□□□ -1.12
MBD4-209ENST00000511009 BPHLQ86WA6 291 aaPredicted RBP8.04□□□□□ -1.12
MBD4-209ENST00000511009 FAM174AQ8TBP5 190 aa8.04□□□□□ -1.12
MBD4-209ENST00000511009 TMEM88BA6NKF7 163 aa8.03□□□□□ -1.12
MBD4-209ENST00000511009 NR3C2P08235 984 aa8.03□□□□□ -1.12
MBD4-209ENST00000511009 NNTQ13423 1086 aa8.03□□□□□ -1.12
MBD4-209ENST00000511009 KANK4Q5T7N3 995 aaPredicted RBP8.03□□□□□ -1.12
MBD4-209ENST00000511009 RNF135Q8IUD6 432 aa8.03□□□□□ -1.12
MBD4-209ENST00000511009 PLEKHM2Q8IWE5 1019 aa8.03□□□□□ -1.12
MBD4-209ENST00000511009 DEPDC4Q8N2C3 294 aa8.03□□□□□ -1.12
MBD4-209ENST00000511009 IVNS1ABPQ9Y6Y0 642 aa8.03□□□□□ -1.12
MBD4-209ENST00000511009 TIMP2P16035 220 aa8.02□□□□□ -1.13
MBD4-209ENST00000511009 ELOAQ14241 798 aaKnown RBP8.02□□□□□ -1.13
MBD4-209ENST00000511009 LARP1Q6PKG0 1096 aaKnown RBP8.02□□□□□ -1.13
MBD4-209ENST00000511009 ARHGAP9Q9BRR9 750 aa8.02□□□□□ -1.13
MBD4-209ENST00000511009 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
MBD4-209ENST00000511009 NOVA2Q9UNW9 492 aaKnown RBP8.02□□□□□ -1.13
MBD4-209ENST00000511009 WASF2Q9Y6W5 498 aa8.02□□□□□ -1.13
MBD4-209ENST00000511009 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
MBD4-209ENST00000511009 ZBTB33Q86T24 672 aa8.01□□□□□ -1.13
MBD4-209ENST00000511009 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
MBD4-209ENST00000511009 MKRN1Q9UHC7 482 aaKnown RBP8.01□□□□□ -1.13
MBD4-209ENST00000511009 MAP4K5Q9Y4K4 846 aa8.01□□□□□ -1.13
MBD4-209ENST00000511009 NCOA4Q13772 614 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms