RNA–Protein interactions for RNA: ENST00000509985.1

OTUD4-209, Transcript of OTU deubiquitinase 4, humanhuman

TSL 4

Gene OTUD4, Length 467 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-209ENST00000509985 VAC14Q08AM6 782 aa8.42□□□□□ -1.06
OTUD4-209ENST00000509985 KLF16Q9BXK1 252 aaPredicted RBP8.42□□□□□ -1.06
OTUD4-209ENST00000509985 ZIC2O95409 532 aaPredicted RBP8.41□□□□□ -1.06
OTUD4-209ENST00000509985 NR1H3Q13133 447 aa8.41□□□□□ -1.06
OTUD4-209ENST00000509985 NR5A1Q13285 461 aa8.41□□□□□ -1.06
OTUD4-209ENST00000509985 INTS6LQ5JSJ4 861 aaKnown RBP8.41□□□□□ -1.06
OTUD4-209ENST00000509985 TMPRSS4Q9NRS4 437 aa8.41□□□□□ -1.06
OTUD4-209ENST00000509985 GMPR2Q9P2T1 348 aaKnown RBP8.41□□□□□ -1.06
OTUD4-209ENST00000509985 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
OTUD4-209ENST00000509985 MAP4K5Q9Y4K4 846 aa8.41□□□□□ -1.06
OTUD4-209ENST00000509985 SOCS7O14512 581 aa8.4□□□□□ -1.06
OTUD4-209ENST00000509985 GIGYF1O75420 1035 aaPredicted RBP8.4□□□□□ -1.06
OTUD4-209ENST00000509985 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
OTUD4-209ENST00000509985 CTC1Q2NKJ3 1217 aa8.4□□□□□ -1.06
OTUD4-209ENST00000509985 CRIPAKQ8N1N5 446 aa8.4□□□□□ -1.06
OTUD4-209ENST00000509985 PPP1R26Q5T8A7 1209 aaPredicted RBP8.39□□□□□ -1.07
OTUD4-209ENST00000509985 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
OTUD4-209ENST00000509985 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
OTUD4-209ENST00000509985 CCDC116Q8IYX3 515 aa8.39□□□□□ -1.07
OTUD4-209ENST00000509985 ATP13A2Q9NQ11 1180 aa8.39□□□□□ -1.07
OTUD4-209ENST00000509985 APBB1O00213 710 aa8.38□□□□□ -1.07
OTUD4-209ENST00000509985 CBLBQ13191 982 aa8.38□□□□□ -1.07
OTUD4-209ENST00000509985 CLUAP1Q96AJ1 413 aa8.38□□□□□ -1.07
OTUD4-209ENST00000509985 ERVH48-1M5A8F1 160 aa8.36□□□□□ -1.07
OTUD4-209ENST00000509985 UBTFP17480 764 aaKnown RBP8.36□□□□□ -1.07
OTUD4-209ENST00000509985 PRM3Q9NNZ6 103 aa8.36□□□□□ -1.07
OTUD4-209ENST00000509985 SNRPBP14678 240 aaKnown RBP8.35□□□□□ -1.07
OTUD4-209ENST00000509985 NBPF20Q3BBV1 942 aa8.35□□□□□ -1.07
OTUD4-209ENST00000509985 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
OTUD4-209ENST00000509985 PURBQ96QR8 312 aaKnown RBP8.35□□□□□ -1.07
OTUD4-209ENST00000509985 ESPNB1AK53 854 aa8.34□□□□□ -1.07
OTUD4-209ENST00000509985 FLIIQ13045 1269 aa8.34□□□□□ -1.07
OTUD4-209ENST00000509985 TSGA10IPQ3SY00 556 aa8.34□□□□□ -1.07
OTUD4-209ENST00000509985 AGBL1Q96MI9 1066 aa8.34□□□□□ -1.07
OTUD4-209ENST00000509985 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
OTUD4-209ENST00000509985 POM121CA8CG34 1229 aa8.33□□□□□ -1.08
OTUD4-209ENST00000509985 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
OTUD4-209ENST00000509985 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
OTUD4-209ENST00000509985 ZFP42Q96MM3 310 aa8.33□□□□□ -1.08
OTUD4-209ENST00000509985 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
OTUD4-209ENST00000509985 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
OTUD4-209ENST00000509985 SOBPA7XYQ1 873 aa8.32□□□□□ -1.08
OTUD4-209ENST00000509985 C11orf95C9JLR9 678 aaPredicted RBP8.32□□□□□ -1.08
OTUD4-209ENST00000509985 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
OTUD4-209ENST00000509985 CEP126Q9P2H0 1117 aa8.32□□□□□ -1.08
OTUD4-209ENST00000509985 RAD21O60216 631 aa8.31□□□□□ -1.08
OTUD4-209ENST00000509985 LILRA1O75019 489 aa8.3□□□□□ -1.08
OTUD4-209ENST00000509985 MEIOBQ8N635 442 aa8.3□□□□□ -1.08
OTUD4-209ENST00000509985 CDCA7Q9BWT1 371 aaPredicted RBP8.3□□□□□ -1.08
OTUD4-209ENST00000509985 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
OTUD4-209ENST00000509985 BMP2P12643 396 aa8.29□□□□□ -1.08
OTUD4-209ENST00000509985 SCTRP47872 440 aa8.29□□□□□ -1.08
OTUD4-209ENST00000509985 EIF4G2P78344 907 aaKnown RBP eCLIP8.29□□□□□ -1.08
OTUD4-209ENST00000509985 RELBQ01201 579 aa8.29□□□□□ -1.08
OTUD4-209ENST00000509985 DHX9Q08211 1270 aaKnown RBP8.29□□□□□ -1.08
OTUD4-209ENST00000509985 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
OTUD4-209ENST00000509985 ZNF330Q9Y3S2 320 aaPredicted RBP8.29□□□□□ -1.08
OTUD4-209ENST00000509985 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
OTUD4-209ENST00000509985 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
OTUD4-209ENST00000509985 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
OTUD4-209ENST00000509985 PIK3CDO00329 1044 aa8.27□□□□□ -1.09
OTUD4-209ENST00000509985 WASHC4Q2M389 1173 aa8.27□□□□□ -1.09
OTUD4-209ENST00000509985 Q6ZVU0 165 aa8.27□□□□□ -1.09
OTUD4-209ENST00000509985 ADAMTS19Q8TE59 1207 aa8.27□□□□□ -1.09
OTUD4-209ENST00000509985 TRIM47Q96LD4 638 aa8.27□□□□□ -1.09
OTUD4-209ENST00000509985 SEMA3FQ13275 785 aa8.26□□□□□ -1.09
OTUD4-209ENST00000509985 SCARF1Q14162 830 aa8.26□□□□□ -1.09
OTUD4-209ENST00000509985 PHTF2Q8N3S3 785 aa8.26□□□□□ -1.09
OTUD4-209ENST00000509985 KDF1Q8NAX2 398 aaPredicted RBP8.26□□□□□ -1.09
OTUD4-209ENST00000509985 FIGNL2A6NMB9 653 aa8.25□□□□□ -1.09
OTUD4-209ENST00000509985 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
OTUD4-209ENST00000509985 ZNF775Q96BV0 537 aaPredicted RBP8.25□□□□□ -1.09
OTUD4-209ENST00000509985 SLFNL1Q499Z3 407 aa8.24□□□□□ -1.09
OTUD4-209ENST00000509985 RNF135Q8IUD6 432 aa8.24□□□□□ -1.09
OTUD4-209ENST00000509985 INSM2Q96T92 566 aaPredicted RBP8.24□□□□□ -1.09
OTUD4-209ENST00000509985 ALG2Q9H553 416 aa8.24□□□□□ -1.09
OTUD4-209ENST00000509985 SENP2Q9HC62 589 aa8.24□□□□□ -1.09
OTUD4-209ENST00000509985 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
OTUD4-209ENST00000509985 UPP2O95045 317 aa8.23□□□□□ -1.09
OTUD4-209ENST00000509985 STAU1O95793 577 aaKnown RBP8.23□□□□□ -1.09
OTUD4-209ENST00000509985 CTSOP43234 321 aaPredicted RBP8.23□□□□□ -1.09
OTUD4-209ENST00000509985 MCCD1P59942 119 aaPredicted RBP8.23□□□□□ -1.09
OTUD4-209ENST00000509985 OXLD1Q5BKU9 147 aa8.23□□□□□ -1.09
OTUD4-209ENST00000509985 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
OTUD4-209ENST00000509985 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
OTUD4-209ENST00000509985 FNBP4Q8N3X1 1017 aaPredicted RBP8.23□□□□□ -1.09
OTUD4-209ENST00000509985 TSEN34Q9BSV6 310 aaKnown RBP8.23□□□□□ -1.09
OTUD4-209ENST00000509985 ADH1AP07327 375 aa8.22□□□□□ -1.09
OTUD4-209ENST00000509985 VEGFBP49765 207 aa8.22□□□□□ -1.09
OTUD4-209ENST00000509985 ERVK-9P63128 1117 aa8.22□□□□□ -1.09
OTUD4-209ENST00000509985 HDGFL1Q5TGJ6 251 aa8.22□□□□□ -1.09
OTUD4-209ENST00000509985 OSBPL3Q9H4L5 887 aa8.22□□□□□ -1.09
OTUD4-209ENST00000509985 CC2D2BQ6DHV5 1058 aa8.21□□□□□ -1.1
OTUD4-209ENST00000509985 KIFC2Q96AC6 838 aa8.21□□□□□ -1.1
OTUD4-209ENST00000509985 RAB6BQ9NRW1 208 aa8.21□□□□□ -1.1
OTUD4-209ENST00000509985 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
OTUD4-209ENST00000509985 DOLKQ9UPQ8 538 aa8.21□□□□□ -1.1
OTUD4-209ENST00000509985 SPINT1O43278 529 aa8.2□□□□□ -1.1
OTUD4-209ENST00000509985 PTGIRP43119 386 aa8.2□□□□□ -1.1
OTUD4-209ENST00000509985 WWC1Q8IX03 1113 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms