RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
CAST-228ENST00000509903 IPO9Q96P70 1041 aaKnown RBP9.73□□□□□ -0.85
CAST-228ENST00000509903 TRAIPQ9BWF2 469 aa9.73□□□□□ -0.85
CAST-228ENST00000509903 PREX1Q8TCU6 1659 aa9.73□□□□□ -0.85
CAST-228ENST00000509903 RETREG2Q8NC44 543 aa9.73□□□□□ -0.85
CAST-228ENST00000509903 STK26Q9P289 416 aa9.73□□□□□ -0.85
CAST-228ENST00000509903 NSD2O96028 1365 aa9.72□□□□□ -0.85
CAST-228ENST00000509903 REPIN1Q9BWE0 567 aaKnown RBP9.72□□□□□ -0.85
CAST-228ENST00000509903 MYO5BQ9ULV0 1848 aa9.71□□□□□ -0.85
CAST-228ENST00000509903 MTHFSP49914 203 aa9.71□□□□□ -0.85
CAST-228ENST00000509903 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.85
CAST-228ENST00000509903 FAM69CQ0P6D2 419 aa9.71□□□□□ -0.85
CAST-228ENST00000509903 CENPQQ7L2Z9 268 aaPredicted RBP9.71□□□□□ -0.85
CAST-228ENST00000509903 WWC1Q8IX03 1113 aa9.71□□□□□ -0.85
CAST-228ENST00000509903 RUNDC1Q96C34 613 aa9.71□□□□□ -0.85
CAST-228ENST00000509903 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.85
CAST-228ENST00000509903 SHPRHQ149N8 1683 aa9.71□□□□□ -0.86
CAST-228ENST00000509903 NINLQ9Y2I6 1382 aa9.71□□□□□ -0.86
CAST-228ENST00000509903 TMEM131LA2VDJ0 1609 aa9.7□□□□□ -0.86
CAST-228ENST00000509903 IRF6O14896 467 aa9.7□□□□□ -0.86
CAST-228ENST00000509903 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
CAST-228ENST00000509903 BACH2Q9BYV9 841 aa9.7□□□□□ -0.86
CAST-228ENST00000509903 GZF1Q9H116 711 aaPredicted RBP9.7□□□□□ -0.86
CAST-228ENST00000509903 KDM2BQ8NHM5 1336 aa9.7□□□□□ -0.86
CAST-228ENST00000509903 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
CAST-228ENST00000509903 POGKQ9P215 609 aa9.7□□□□□ -0.86
CAST-228ENST00000509903 BCAR3O75815 825 aa9.69□□□□□ -0.86
CAST-228ENST00000509903 AMHR2Q16671 573 aa9.69□□□□□ -0.86
CAST-228ENST00000509903 TCP11L2Q8N4U5 519 aa9.69□□□□□ -0.86
CAST-228ENST00000509903 RRP7AQ9Y3A4 280 aaKnown RBP9.69□□□□□ -0.86
CAST-228ENST00000509903 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
CAST-228ENST00000509903 MINK1Q8N4C8 1332 aaPredicted RBP9.69□□□□□ -0.86
CAST-228ENST00000509903 SOX12O15370 315 aa9.68□□□□□ -0.86
CAST-228ENST00000509903 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
CAST-228ENST00000509903 RBM25P49756 843 aaKnown RBP9.68□□□□□ -0.86
CAST-228ENST00000509903 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
CAST-228ENST00000509903 PRAM1Q96QH2 718 aa9.68□□□□□ -0.86
CAST-228ENST00000509903 YTHDC2Q9H6S0 1430 aaKnown RBP9.68□□□□□ -0.86
CAST-228ENST00000509903 A0A1W2PP64 1363 aa9.68□□□□□ -0.86
CAST-228ENST00000509903 IQSEC2Q5JU85 1478 aa9.68□□□□□ -0.86
CAST-228ENST00000509903 U2AF1L5P0DN76 240 aaPredicted RBP9.68□□□□□ -0.86
CAST-228ENST00000509903 U2AF1Q01081 240 aaKnown RBP eCLIP9.68□□□□□ -0.86
CAST-228ENST00000509903 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
CAST-228ENST00000509903 TERF2IPQ9NYB0 399 aa9.68□□□□□ -0.86
CAST-228ENST00000509903 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
CAST-228ENST00000509903 ABCC11Q96J66 1382 aa9.68□□□□□ -0.86
CAST-228ENST00000509903 PTPRMP28827 1452 aa9.67□□□□□ -0.86
CAST-228ENST00000509903 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
CAST-228ENST00000509903 SKAP1Q86WV1 359 aa9.67□□□□□ -0.86
CAST-228ENST00000509903 TSPOAP1O95153 1857 aa9.67□□□□□ -0.86
CAST-228ENST00000509903 MFAP1P55081 439 aaKnown RBP9.67□□□□□ -0.86
CAST-228ENST00000509903 REM2Q8IYK8 340 aaPredicted RBP9.67□□□□□ -0.86
CAST-228ENST00000509903 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
CAST-228ENST00000509903 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
CAST-228ENST00000509903 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
CAST-228ENST00000509903 WDR63Q8IWG1 891 aa9.66□□□□□ -0.86
CAST-228ENST00000509903 CCDC27Q2M243 656 aa9.65□□□□□ -0.86
CAST-228ENST00000509903 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
CAST-228ENST00000509903 ALKQ9UM73 1620 aa9.65□□□□□ -0.86
CAST-228ENST00000509903 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
CAST-228ENST00000509903 HDGFL2Q7Z4V5 671 aaPredicted RBP9.65□□□□□ -0.86
CAST-228ENST00000509903 REREQ9P2R6 1566 aa9.65□□□□□ -0.87
CAST-228ENST00000509903 AGLP35573 1532 aa9.65□□□□□ -0.87
CAST-228ENST00000509903 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
CAST-228ENST00000509903 FRAT1Q92837 279 aaPredicted RBP9.64□□□□□ -0.87
CAST-228ENST00000509903 MYH16Q9H6N6 1097 aa9.64□□□□□ -0.87
CAST-228ENST00000509903 CLTCQ00610 1675 aaKnown RBP9.64□□□□□ -0.87
CAST-228ENST00000509903 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
CAST-228ENST00000509903 U2SURPO15042 1029 aaKnown RBP9.64□□□□□ -0.87
CAST-228ENST00000509903 PDIA6Q15084 440 aa9.64□□□□□ -0.87
CAST-228ENST00000509903 TMCO4Q5TGY1 634 aa9.64□□□□□ -0.87
CAST-228ENST00000509903 MAP3K13O43283 966 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 RARSP54136 660 aaKnown RBP9.63□□□□□ -0.87
CAST-228ENST00000509903 MLECQ14165 292 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 CDK19Q9BWU1 502 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 MAPK8IP3Q9UPT6 1336 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 FYB1O15117 783 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 RGS3P49796 1198 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
CAST-228ENST00000509903 PANK1Q8TE04 598 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 GOPCQ9HD26 462 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 COG6Q9Y2V7 657 aa9.63□□□□□ -0.87
CAST-228ENST00000509903 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
CAST-228ENST00000509903 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
CAST-228ENST00000509903 A2ML1A8K2U0 1454 aa9.62□□□□□ -0.87
CAST-228ENST00000509903 MED14O60244 1454 aa9.62□□□□□ -0.87
CAST-228ENST00000509903 ADGRB2O60241 1585 aa9.61□□□□□ -0.87
CAST-228ENST00000509903 SPATA31D1Q6ZQQ2 1576 aa9.61□□□□□ -0.87
CAST-228ENST00000509903 RIMS2Q9UQ26 1411 aa9.61□□□□□ -0.87
CAST-228ENST00000509903 PROCA1Q8NCQ7 364 aaPredicted RBP9.61□□□□□ -0.87
CAST-228ENST00000509903 CABP1Q9NZU7 370 aa9.61□□□□□ -0.87
CAST-228ENST00000509903 CD163L1Q9NR16 1453 aa9.61□□□□□ -0.87
CAST-228ENST00000509903 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
CAST-228ENST00000509903 OXER1Q8TDS5 423 aa9.61□□□□□ -0.87
CAST-228ENST00000509903 ESF1Q9H501 851 aaKnown RBP9.61□□□□□ -0.87
CAST-228ENST00000509903 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
CAST-228ENST00000509903 CCDC97Q96F63 343 aaPredicted RBP9.6□□□□□ -0.87
CAST-228ENST00000509903 BCL2L13Q9BXK5 485 aa9.6□□□□□ -0.87
CAST-228ENST00000509903 COL3A1P02461 1466 aaPredicted RBP9.6□□□□□ -0.87
CAST-228ENST00000509903 NLRP1Q9C000 1473 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms