RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 VASH1Q7L8A9 365 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC11-206ENST00000509857 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC11-206ENST00000509857 POM121CA8CG34 1229 aa13.78□□□□□ -0.2
TRAPPC11-206ENST00000509857 NR5A1Q13285 461 aa13.78□□□□□ -0.2
TRAPPC11-206ENST00000509857 ARID5BQ14865 1188 aa13.78□□□□□ -0.2
TRAPPC11-206ENST00000509857 ESPNB1AK53 854 aa13.77□□□□□ -0.21
TRAPPC11-206ENST00000509857 KCTD15Q96SI1 283 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC11-206ENST00000509857 ALG2Q9H553 416 aa13.77□□□□□ -0.21
TRAPPC11-206ENST00000509857 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
TRAPPC11-206ENST00000509857 FSHRP23945 695 aa13.75□□□□□ -0.21
TRAPPC11-206ENST00000509857 WASF2Q9Y6W5 498 aa13.75□□□□□ -0.21
TRAPPC11-206ENST00000509857 SEPT12Q8IYM1 358 aa13.74□□□□□ -0.21
TRAPPC11-206ENST00000509857 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
TRAPPC11-206ENST00000509857 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
TRAPPC11-206ENST00000509857 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
TRAPPC11-206ENST00000509857 CEP126Q9P2H0 1117 aa13.73□□□□□ -0.21
TRAPPC11-206ENST00000509857 FAM187AA6NFU0 413 aa13.72□□□□□ -0.21
TRAPPC11-206ENST00000509857 DGAT1O75907 488 aa13.72□□□□□ -0.21
TRAPPC11-206ENST00000509857 NNTQ13423 1086 aa13.72□□□□□ -0.21
TRAPPC11-206ENST00000509857 GIGYF1O75420 1035 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC11-206ENST00000509857 AVPP01185 164 aa13.71□□□□□ -0.21
TRAPPC11-206ENST00000509857 NR3C2P08235 984 aa13.71□□□□□ -0.21
TRAPPC11-206ENST00000509857 CCDC125Q86Z20 511 aa13.71□□□□□ -0.21
TRAPPC11-206ENST00000509857 RNF20Q5VTR2 975 aa13.69□□□□□ -0.22
TRAPPC11-206ENST00000509857 PHTF2Q8N3S3 785 aa13.69□□□□□ -0.22
TRAPPC11-206ENST00000509857 HDGFL1Q5TGJ6 251 aa13.68□□□□□ -0.22
TRAPPC11-206ENST00000509857 CCDC116Q8IYX3 515 aa13.68□□□□□ -0.22
TRAPPC11-206ENST00000509857 HPS1Q92902 700 aa13.68□□□□□ -0.22
TRAPPC11-206ENST00000509857 GLMNQ92990 594 aa13.68□□□□□ -0.22
TRAPPC11-206ENST00000509857 KLF16Q9BXK1 252 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC11-206ENST00000509857 DHX9Q08211 1270 aaKnown RBP13.67□□□□□ -0.22
TRAPPC11-206ENST00000509857 PKDCCQ504Y2 493 aa13.67□□□□□ -0.22
TRAPPC11-206ENST00000509857 CHIC2Q9UKJ5 165 aa13.66□□□□□ -0.22
TRAPPC11-206ENST00000509857 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC11-206ENST00000509857 PPP1R26Q5T8A7 1209 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC11-206ENST00000509857 CRIPAKQ8N1N5 446 aa13.64□□□□□ -0.23
TRAPPC11-206ENST00000509857 EMILIN1Q9Y6C2 1016 aa13.64□□□□□ -0.23
TRAPPC11-206ENST00000509857 ERVH48-1M5A8F1 160 aa13.63□□□□□ -0.23
TRAPPC11-206ENST00000509857 TIMP2P16035 220 aa13.63□□□□□ -0.23
TRAPPC11-206ENST00000509857 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC11-206ENST00000509857 SLFNL1Q499Z3 407 aa13.63□□□□□ -0.23
TRAPPC11-206ENST00000509857 NFATC2IPQ8NCF5 419 aa13.63□□□□□ -0.23
TRAPPC11-206ENST00000509857 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
TRAPPC11-206ENST00000509857 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
TRAPPC11-206ENST00000509857 UCN2Q96RP3 112 aa13.62□□□□□ -0.23
TRAPPC11-206ENST00000509857 WDR4P57081 412 aaKnown RBP13.61□□□□□ -0.23
TRAPPC11-206ENST00000509857 CALR3Q96L12 384 aaKnown RBP13.61□□□□□ -0.23
TRAPPC11-206ENST00000509857 CCDC85AQ96PX6 553 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-206ENST00000509857 RAB15P59190 212 aa13.6□□□□□ -0.23
TRAPPC11-206ENST00000509857 ITPKCQ96DU7 683 aa13.6□□□□□ -0.23
TRAPPC11-206ENST00000509857 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
TRAPPC11-206ENST00000509857 PIK3CDO00329 1044 aa13.59□□□□□ -0.23
TRAPPC11-206ENST00000509857 MYT1Q01538 1121 aa13.59□□□□□ -0.23
TRAPPC11-206ENST00000509857 ZIC2O95409 532 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC11-206ENST00000509857 MAP7D1Q3KQU3 841 aa13.57□□□□□ -0.24
TRAPPC11-206ENST00000509857 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC11-206ENST00000509857 TRIM52Q96A61 297 aa13.57□□□□□ -0.24
TRAPPC11-206ENST00000509857 LILRA1O75019 489 aa13.56□□□□□ -0.24
TRAPPC11-206ENST00000509857 ZFAND3Q9H8U3 227 aa13.56□□□□□ -0.24
TRAPPC11-206ENST00000509857 TMPRSS4Q9NRS4 437 aa13.56□□□□□ -0.24
TRAPPC11-206ENST00000509857 PCDHB11Q9Y5F2 797 aa13.56□□□□□ -0.24
TRAPPC11-206ENST00000509857 CAPN5O15484 640 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC11-206ENST00000509857 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
TRAPPC11-206ENST00000509857 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
TRAPPC11-206ENST00000509857 PLPP7Q8NBV4 271 aa13.55□□□□□ -0.24
TRAPPC11-206ENST00000509857 DOLKQ9UPQ8 538 aa13.55□□□□□ -0.24
TRAPPC11-206ENST00000509857 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
TRAPPC11-206ENST00000509857 Q6ZNB5 142 aa13.54□□□□□ -0.24
TRAPPC11-206ENST00000509857 AAASQ9NRG9 546 aa13.54□□□□□ -0.24
TRAPPC11-206ENST00000509857 TBC1D9Q6ZT07 1266 aa13.53□□□□□ -0.24
TRAPPC11-206ENST00000509857 Q6ZVU0 165 aa13.53□□□□□ -0.24
TRAPPC11-206ENST00000509857 LCE2BO14633 110 aa13.52□□□□□ -0.25
TRAPPC11-206ENST00000509857 AXIN1O15169 862 aa13.52□□□□□ -0.25
TRAPPC11-206ENST00000509857 ATP9BO43861 1147 aa13.52□□□□□ -0.25
TRAPPC11-206ENST00000509857 SKIP12755 728 aa13.52□□□□□ -0.25
TRAPPC11-206ENST00000509857 MEIOBQ8N635 442 aa13.52□□□□□ -0.25
TRAPPC11-206ENST00000509857 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC11-206ENST00000509857 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
TRAPPC11-206ENST00000509857 LZTS3O60299 673 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC11-206ENST00000509857 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
TRAPPC11-206ENST00000509857 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
TRAPPC11-206ENST00000509857 PPP1R12CQ9BZL4 782 aa13.51□□□□□ -0.25
TRAPPC11-206ENST00000509857 C1orf115Q9H7X2 142 aa13.51□□□□□ -0.25
TRAPPC11-206ENST00000509857 CYLDQ9NQC7 956 aa13.51□□□□□ -0.25
TRAPPC11-206ENST00000509857 USP17L5A8MUK1 530 aa13.5□□□□□ -0.25
TRAPPC11-206ENST00000509857 ST8SIA5O15466 376 aa13.5□□□□□ -0.25
TRAPPC11-206ENST00000509857 SCTRP47872 440 aa13.5□□□□□ -0.25
TRAPPC11-206ENST00000509857 PALM3A6NDB9 673 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC11-206ENST00000509857 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
TRAPPC11-206ENST00000509857 CBLBQ13191 982 aa13.48□□□□□ -0.25
TRAPPC11-206ENST00000509857 TFIP11Q9UBB9 837 aaKnown RBP13.48□□□□□ -0.25
TRAPPC11-206ENST00000509857 MAFBQ9Y5Q3 323 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC11-206ENST00000509857 ADH1AP07327 375 aa13.47□□□□□ -0.25
TRAPPC11-206ENST00000509857 USP4Q13107 963 aa13.47□□□□□ -0.25
TRAPPC11-206ENST00000509857 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
TRAPPC11-206ENST00000509857 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
TRAPPC11-206ENST00000509857 OXLD1Q5BKU9 147 aa13.46□□□□□ -0.25
TRAPPC11-206ENST00000509857 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
TRAPPC11-206ENST00000509857 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
TRAPPC11-206ENST00000509857 SIRT1Q96EB6 747 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms