RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 SLIT3O75094 1523 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
LYSMD3-204ENST00000509384 ZNF521Q96K83 1311 aa16.61■□□□□ 0.25
LYSMD3-204ENST00000509384 HOXC9P31274 260 aa16.6■□□□□ 0.25
LYSMD3-204ENST00000509384 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
LYSMD3-204ENST00000509384 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 GCP02774 474 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 NEFMP07197 916 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 HMOX1P09601 288 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 ARHGEF10O15013 1369 aa16.58■□□□□ 0.25
LYSMD3-204ENST00000509384 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 NEUROD2Q15784 382 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 RRP7AQ9Y3A4 280 aaKnown RBP16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 GOLGA2Q08379 1002 aa16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 CERKQ8TCT0 537 aa16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
LYSMD3-204ENST00000509384 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 CCDC27Q2M243 656 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 WWC1Q8IX03 1113 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 IP6K1Q92551 441 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 TMPOP42166 694 aaKnown RBP16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
LYSMD3-204ENST00000509384 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
LYSMD3-204ENST00000509384 IGSF1Q8N6C5 1336 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 E9PSI1 815 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 NEFLP07196 543 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 RGPD1P0DJD0 1748 aa16.52■□□□□ 0.23
LYSMD3-204ENST00000509384 LTN1O94822 1766 aa16.52■□□□□ 0.23
LYSMD3-204ENST00000509384 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
LYSMD3-204ENST00000509384 EYA1Q99502 592 aa16.51■□□□□ 0.23
LYSMD3-204ENST00000509384 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 RIPK4P57078 832 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 KDRP35968 1356 aa16.49■□□□□ 0.23
LYSMD3-204ENST00000509384 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
LYSMD3-204ENST00000509384 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
LYSMD3-204ENST00000509384 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
LYSMD3-204ENST00000509384 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
LYSMD3-204ENST00000509384 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 CPDO75976 1380 aa16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 AHDC1Q5TGY3 1603 aaPredicted RBP16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 ANKRD24Q8TF21 1146 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 ABCC6O95255 1503 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 TOM1O60784 492 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 IL16Q14005 1332 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 FKBP8Q14318 412 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 AXIN2Q9Y2T1 843 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 CALD1Q05682 793 aaKnown RBP16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 ERBB3P21860 1342 aa16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
LYSMD3-204ENST00000509384 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
LYSMD3-204ENST00000509384 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
LYSMD3-204ENST00000509384 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
LYSMD3-204ENST00000509384 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
LYSMD3-204ENST00000509384 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
LYSMD3-204ENST00000509384 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 COL18A1P39060 1754 aa16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
LYSMD3-204ENST00000509384 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
LYSMD3-204ENST00000509384 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
LYSMD3-204ENST00000509384 DCTN1Q14203 1278 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 LMO7Q8WWI1 1683 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 GNAI1P63096 354 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 MCM10Q7L590 875 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms