RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
SNCA-211ENST00000508895 HSPA5P11021 654 aaKnown RBP12.17□□□□□ -0.46
SNCA-211ENST00000508895 RGPD2P0DJD1 1756 aa12.17□□□□□ -0.46
SNCA-211ENST00000508895 A0A0G2JS52 829 aa12.16□□□□□ -0.46
SNCA-211ENST00000508895 EVA1CP58658 441 aa12.16□□□□□ -0.46
SNCA-211ENST00000508895 MYT1Q01538 1121 aa12.16□□□□□ -0.46
SNCA-211ENST00000508895 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
SNCA-211ENST00000508895 PARP4Q9UKK3 1724 aaKnown RBP12.15□□□□□ -0.46
SNCA-211ENST00000508895 TMF1P82094 1093 aa12.15□□□□□ -0.46
SNCA-211ENST00000508895 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.46
SNCA-211ENST00000508895 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
SNCA-211ENST00000508895 LRRC37A3O60309 1634 aa12.15□□□□□ -0.47
SNCA-211ENST00000508895 CRB1P82279 1406 aa12.14□□□□□ -0.47
SNCA-211ENST00000508895 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
SNCA-211ENST00000508895 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
SNCA-211ENST00000508895 FYB1O15117 783 aa12.13□□□□□ -0.47
SNCA-211ENST00000508895 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
SNCA-211ENST00000508895 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
SNCA-211ENST00000508895 TERF2IPQ9NYB0 399 aa12.13□□□□□ -0.47
SNCA-211ENST00000508895 SBF2Q86WG5 1849 aa12.13□□□□□ -0.47
SNCA-211ENST00000508895 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
SNCA-211ENST00000508895 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
SNCA-211ENST00000508895 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
SNCA-211ENST00000508895 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
SNCA-211ENST00000508895 GGNBP2Q9H3C7 697 aa12.12□□□□□ -0.47
SNCA-211ENST00000508895 WDR17Q8IZU2 1322 aa12.11□□□□□ -0.47
SNCA-211ENST00000508895 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
SNCA-211ENST00000508895 TOM1L2Q6ZVM7 507 aa12.11□□□□□ -0.47
SNCA-211ENST00000508895 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
SNCA-211ENST00000508895 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
SNCA-211ENST00000508895 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
SNCA-211ENST00000508895 RRS1Q15050 365 aaKnown RBP12.09□□□□□ -0.47
SNCA-211ENST00000508895 ABCC6O95255 1503 aa12.09□□□□□ -0.47
SNCA-211ENST00000508895 FAM208AQ9UK61 1670 aaKnown RBP12.09□□□□□ -0.47
SNCA-211ENST00000508895 ERBB3P21860 1342 aa12.09□□□□□ -0.47
SNCA-211ENST00000508895 TRIM37O94972 964 aa12.08□□□□□ -0.48
SNCA-211ENST00000508895 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNCA-211ENST00000508895 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
SNCA-211ENST00000508895 IFFO2Q5TF58 517 aa12.08□□□□□ -0.48
SNCA-211ENST00000508895 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
SNCA-211ENST00000508895 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
SNCA-211ENST00000508895 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
SNCA-211ENST00000508895 CARD10Q9BWT7 1032 aa12.08□□□□□ -0.48
SNCA-211ENST00000508895 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
SNCA-211ENST00000508895 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
SNCA-211ENST00000508895 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
SNCA-211ENST00000508895 SHANK3Q9BYB0 1731 aa12.06□□□□□ -0.48
SNCA-211ENST00000508895 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
SNCA-211ENST00000508895 HOXC9P31274 260 aa12.06□□□□□ -0.48
SNCA-211ENST00000508895 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
SNCA-211ENST00000508895 IP6K1Q92551 441 aa12.06□□□□□ -0.48
SNCA-211ENST00000508895 COG3Q96JB2 828 aa12.06□□□□□ -0.48
SNCA-211ENST00000508895 EZH2Q15910 746 aaKnown RBP12.05□□□□□ -0.48
SNCA-211ENST00000508895 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
SNCA-211ENST00000508895 KAT6BQ8WYB5 2073 aa12.05□□□□□ -0.48
SNCA-211ENST00000508895 RREB1Q92766 1687 aa12.04□□□□□ -0.48
SNCA-211ENST00000508895 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
SNCA-211ENST00000508895 CAMKK2Q96RR4 588 aa12.04□□□□□ -0.48
SNCA-211ENST00000508895 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
SNCA-211ENST00000508895 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
SNCA-211ENST00000508895 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
SNCA-211ENST00000508895 HSP90AB2PQ58FF8 381 aa12.03□□□□□ -0.48
SNCA-211ENST00000508895 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
SNCA-211ENST00000508895 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
SNCA-211ENST00000508895 PANK3Q9H999 370 aa12.03□□□□□ -0.48
SNCA-211ENST00000508895 DDB1Q16531 1140 aa12.02□□□□□ -0.49
SNCA-211ENST00000508895 CDCA8Q53HL2 280 aa12.02□□□□□ -0.49
SNCA-211ENST00000508895 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.49
SNCA-211ENST00000508895 MEGF6O75095 1541 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
SNCA-211ENST00000508895 KCNQ2O43526 872 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 APBA3O96018 575 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 AMPHP49418 695 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 CCDC7Q96M83 1385 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
SNCA-211ENST00000508895 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
SNCA-211ENST00000508895 SF3B2Q13435 895 aaKnown RBP12□□□□□ -0.49
SNCA-211ENST00000508895 OVOS2A0A0G2JMS6 1433 aa12□□□□□ -0.49
SNCA-211ENST00000508895 BAG6P46379 1132 aa11.99□□□□□ -0.49
SNCA-211ENST00000508895 PROM2Q8N271 834 aa11.99□□□□□ -0.49
SNCA-211ENST00000508895 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
SNCA-211ENST00000508895 LRP5O75197 1615 aa11.99□□□□□ -0.49
SNCA-211ENST00000508895 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
SNCA-211ENST00000508895 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
SNCA-211ENST00000508895 EXOC5O00471 708 aa11.98□□□□□ -0.49
SNCA-211ENST00000508895 IL2RBP14784 551 aa11.98□□□□□ -0.49
SNCA-211ENST00000508895 TNNT2P45379 298 aaPredicted RBP11.98□□□□□ -0.49
SNCA-211ENST00000508895 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
SNCA-211ENST00000508895 BTAF1O14981 1849 aa11.97□□□□□ -0.49
SNCA-211ENST00000508895 BCL9O00512 1426 aa11.97□□□□□ -0.49
SNCA-211ENST00000508895 INSRP06213 1382 aa11.97□□□□□ -0.49
SNCA-211ENST00000508895 CGNL1Q0VF96 1302 aa11.96□□□□□ -0.49
SNCA-211ENST00000508895 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
SNCA-211ENST00000508895 YY1P25490 414 aa11.96□□□□□ -0.49
SNCA-211ENST00000508895 R3HDM1Q15032 1099 aaKnown RBP11.96□□□□□ -0.49
SNCA-211ENST00000508895 CDCA7Q9BWT1 371 aaPredicted RBP11.96□□□□□ -0.49
SNCA-211ENST00000508895 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.49
SNCA-211ENST00000508895 CEP350Q5VT06 3117 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms