RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 MEX3CQ5U5Q3 659 aaKnown RBP14.15□□□□□ -0.14
PTPN20-220ENST00000508715 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
PTPN20-220ENST00000508715 EMILIN1Q9Y6C2 1016 aa14.15□□□□□ -0.14
PTPN20-220ENST00000508715 ABCC6O95255 1503 aa14.15□□□□□ -0.14
PTPN20-220ENST00000508715 COL5A2P05997 1499 aaPredicted RBP14.14□□□□□ -0.15
PTPN20-220ENST00000508715 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
PTPN20-220ENST00000508715 MORC1Q86VD1 984 aa14.14□□□□□ -0.15
PTPN20-220ENST00000508715 BTG4Q9NY30 223 aa14.14□□□□□ -0.15
PTPN20-220ENST00000508715 SMG6Q86US8 1419 aaKnown RBP14.14□□□□□ -0.15
PTPN20-220ENST00000508715 ZBTB7CA1YPR0 619 aa14.13□□□□□ -0.15
PTPN20-220ENST00000508715 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
PTPN20-220ENST00000508715 GLI3P10071 1580 aa14.13□□□□□ -0.15
PTPN20-220ENST00000508715 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
PTPN20-220ENST00000508715 HOXC9P31274 260 aa14.12□□□□□ -0.15
PTPN20-220ENST00000508715 UNC5CLQ8IV45 518 aa14.12□□□□□ -0.15
PTPN20-220ENST00000508715 IP6K1Q92551 441 aa14.12□□□□□ -0.15
PTPN20-220ENST00000508715 USP21Q9UK80 565 aa14.12□□□□□ -0.15
PTPN20-220ENST00000508715 ATRNO75882 1429 aa14.12□□□□□ -0.15
PTPN20-220ENST00000508715 HSP90AB2PQ58FF8 381 aa14.1□□□□□ -0.15
PTPN20-220ENST00000508715 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
PTPN20-220ENST00000508715 LARP1Q6PKG0 1096 aaKnown RBP14.09□□□□□ -0.15
PTPN20-220ENST00000508715 FAM208AQ9UK61 1670 aaKnown RBP14.09□□□□□ -0.15
PTPN20-220ENST00000508715 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
PTPN20-220ENST00000508715 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.15
PTPN20-220ENST00000508715 BLMP54132 1417 aaPredicted RBP14.08□□□□□ -0.15
PTPN20-220ENST00000508715 COL3A1P02461 1466 aaPredicted RBP14.08□□□□□ -0.16
PTPN20-220ENST00000508715 PPP2R1AP30153 589 aa14.08□□□□□ -0.16
PTPN20-220ENST00000508715 VPS72Q15906 364 aa14.08□□□□□ -0.16
PTPN20-220ENST00000508715 QTRT2Q9H974 415 aaKnown RBP14.08□□□□□ -0.16
PTPN20-220ENST00000508715 ERBB3P21860 1342 aa14.08□□□□□ -0.16
PTPN20-220ENST00000508715 INSRP06213 1382 aa14.08□□□□□ -0.16
PTPN20-220ENST00000508715 FLT4P35916 1363 aa14.08□□□□□ -0.16
PTPN20-220ENST00000508715 CDK12Q9NYV4 1490 aaPredicted RBP14.07□□□□□ -0.16
PTPN20-220ENST00000508715 AMPHP49418 695 aa14.07□□□□□ -0.16
PTPN20-220ENST00000508715 MTHFSP49914 203 aa14.07□□□□□ -0.16
PTPN20-220ENST00000508715 ZNF772Q68DY9 489 aaPredicted RBP14.07□□□□□ -0.16
PTPN20-220ENST00000508715 STRN4Q9NRL3 753 aa14.07□□□□□ -0.16
PTPN20-220ENST00000508715 RGPD1P0DJD0 1748 aa14.07□□□□□ -0.16
PTPN20-220ENST00000508715 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
PTPN20-220ENST00000508715 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
PTPN20-220ENST00000508715 SPATA31A5Q5VU36 1347 aa14.06□□□□□ -0.16
PTPN20-220ENST00000508715 SPATA31A7Q8IWB4 1347 aa14.06□□□□□ -0.16
PTPN20-220ENST00000508715 WDR17Q8IZU2 1322 aa14.06□□□□□ -0.16
PTPN20-220ENST00000508715 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
PTPN20-220ENST00000508715 PRKRIP1Q9H875 184 aaPredicted RBP14.05□□□□□ -0.16
PTPN20-220ENST00000508715 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
PTPN20-220ENST00000508715 SPATA31A1Q5TZJ5 1347 aa14.05□□□□□ -0.16
PTPN20-220ENST00000508715 CRB1P82279 1406 aa14.05□□□□□ -0.16
PTPN20-220ENST00000508715 LTV1Q96GA3 475 aaPredicted RBP14.04□□□□□ -0.16
PTPN20-220ENST00000508715 GJD4Q96KN9 370 aaPredicted RBP14.04□□□□□ -0.16
PTPN20-220ENST00000508715 THSD7AQ9UPZ6 1657 aa14.04□□□□□ -0.16
PTPN20-220ENST00000508715 EVA1CP58658 441 aa14.03□□□□□ -0.16
PTPN20-220ENST00000508715 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
PTPN20-220ENST00000508715 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
PTPN20-220ENST00000508715 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
PTPN20-220ENST00000508715 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
PTPN20-220ENST00000508715 RALBP1Q15311 655 aa14.02□□□□□ -0.17
PTPN20-220ENST00000508715 DISP2A7MBM2 1401 aa14.01□□□□□ -0.17
PTPN20-220ENST00000508715 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
PTPN20-220ENST00000508715 IL13P35225 146 aa14.01□□□□□ -0.17
PTPN20-220ENST00000508715 RBM6P78332 1123 aaKnown RBP14.01□□□□□ -0.17
PTPN20-220ENST00000508715 TOM1L2Q6ZVM7 507 aa14.01□□□□□ -0.17
PTPN20-220ENST00000508715 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
PTPN20-220ENST00000508715 CARD10Q9BWT7 1032 aa14.01□□□□□ -0.17
PTPN20-220ENST00000508715 RGS12O14924 1447 aa14□□□□□ -0.17
PTPN20-220ENST00000508715 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
PTPN20-220ENST00000508715 EYA1Q99502 592 aa14□□□□□ -0.17
PTPN20-220ENST00000508715 USP35Q9P2H5 1018 aa14□□□□□ -0.17
PTPN20-220ENST00000508715 SHANK3Q9BYB0 1731 aa14□□□□□ -0.17
PTPN20-220ENST00000508715 PARP4Q9UKK3 1724 aaKnown RBP14□□□□□ -0.17
PTPN20-220ENST00000508715 CSB-PGBD3P0DP91 1061 aa13.99□□□□□ -0.17
PTPN20-220ENST00000508715 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
PTPN20-220ENST00000508715 NLRP2Q9NX02 1062 aa13.99□□□□□ -0.17
PTPN20-220ENST00000508715 CCDC9Q9Y3X0 531 aaKnown RBP13.99□□□□□ -0.17
PTPN20-220ENST00000508715 LRRC37A3O60309 1634 aa13.98□□□□□ -0.17
PTPN20-220ENST00000508715 MYBBP1AQ9BQG0 1328 aaKnown RBP13.98□□□□□ -0.17
PTPN20-220ENST00000508715 RXRBP28702 533 aa13.98□□□□□ -0.17
PTPN20-220ENST00000508715 FAM98CQ17RN3 349 aaKnown RBP13.98□□□□□ -0.17
PTPN20-220ENST00000508715 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
PTPN20-220ENST00000508715 ILDR2Q71H61 639 aa13.98□□□□□ -0.17
PTPN20-220ENST00000508715 TCP11L2Q8N4U5 519 aa13.98□□□□□ -0.17
PTPN20-220ENST00000508715 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
PTPN20-220ENST00000508715 MEGF6O75095 1541 aa13.97□□□□□ -0.17
PTPN20-220ENST00000508715 AEBP1Q8IUX7 1158 aa13.96□□□□□ -0.17
PTPN20-220ENST00000508715 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
PTPN20-220ENST00000508715 THRAP3Q9Y2W1 955 aaKnown RBP13.95□□□□□ -0.18
PTPN20-220ENST00000508715 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
PTPN20-220ENST00000508715 KDRP35968 1356 aa13.95□□□□□ -0.18
PTPN20-220ENST00000508715 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
PTPN20-220ENST00000508715 KAT6BQ8WYB5 2073 aa13.93□□□□□ -0.18
PTPN20-220ENST00000508715 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
PTPN20-220ENST00000508715 ANP32CO43423 234 aa13.92□□□□□ -0.18
PTPN20-220ENST00000508715 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
PTPN20-220ENST00000508715 OVOS2A0A0G2JMS6 1433 aa13.91□□□□□ -0.18
PTPN20-220ENST00000508715 HMOX1P09601 288 aa13.91□□□□□ -0.18
PTPN20-220ENST00000508715 IL2RBP14784 551 aa13.91□□□□□ -0.18
PTPN20-220ENST00000508715 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
PTPN20-220ENST00000508715 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
PTPN20-220ENST00000508715 CFAP53Q96M91 514 aa13.9□□□□□ -0.18
PTPN20-220ENST00000508715 TNS2Q63HR2 1409 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms