RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 VPS8Q8N3P4 1428 aa11.9□□□□□ -0.5
CDH6-204ENST00000508132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH6-204ENST00000508132 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 MED14O60244 1454 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 SAMD9LQ8IVG5 1584 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
CDH6-204ENST00000508132 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 SCUBE3Q8IX30 993 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
CDH6-204ENST00000508132 ROBO1Q9Y6N7 1651 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 PREX2Q70Z35 1606 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
CDH6-204ENST00000508132 NR1I2O75469 434 aa11.88□□□□□ -0.51
CDH6-204ENST00000508132 OATP04181 439 aa11.88□□□□□ -0.51
CDH6-204ENST00000508132 HIC1Q14526 733 aa11.88□□□□□ -0.51
CDH6-204ENST00000508132 TRIM52Q96A61 297 aa11.88□□□□□ -0.51
CDH6-204ENST00000508132 SLC6A16Q9GZN6 736 aa11.88□□□□□ -0.51
CDH6-204ENST00000508132 MYT1Q01538 1121 aa11.87□□□□□ -0.51
CDH6-204ENST00000508132 SETBP1Q9Y6X0 1596 aa11.87□□□□□ -0.51
CDH6-204ENST00000508132 POTECB2RU33 542 aa11.86□□□□□ -0.51
CDH6-204ENST00000508132 GDF9O60383 454 aa11.86□□□□□ -0.51
CDH6-204ENST00000508132 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
CDH6-204ENST00000508132 LRP6O75581 1613 aa11.86□□□□□ -0.51
CDH6-204ENST00000508132 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
CDH6-204ENST00000508132 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
CDH6-204ENST00000508132 PRR20EP86478 221 aa11.84□□□□□ -0.51
CDH6-204ENST00000508132 PRR20CP86479 221 aa11.84□□□□□ -0.51
CDH6-204ENST00000508132 PRR20DP86480 221 aa11.84□□□□□ -0.51
CDH6-204ENST00000508132 PRR20BP86481 221 aa11.84□□□□□ -0.51
CDH6-204ENST00000508132 PRR20AP86496 221 aa11.84□□□□□ -0.51
CDH6-204ENST00000508132 PKDCCQ504Y2 493 aa11.84□□□□□ -0.51
CDH6-204ENST00000508132 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
CDH6-204ENST00000508132 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
CDH6-204ENST00000508132 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
CDH6-204ENST00000508132 GNPATO15228 680 aa11.83□□□□□ -0.52
CDH6-204ENST00000508132 SPSB2Q99619 263 aa11.83□□□□□ -0.52
CDH6-204ENST00000508132 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
CDH6-204ENST00000508132 FUT2Q10981 343 aa11.82□□□□□ -0.52
CDH6-204ENST00000508132 ANKLE2Q86XL3 938 aa11.82□□□□□ -0.52
CDH6-204ENST00000508132 RDH13Q8NBN7 331 aa11.82□□□□□ -0.52
CDH6-204ENST00000508132 INO80Q9ULG1 1556 aaPredicted RBP11.82□□□□□ -0.52
CDH6-204ENST00000508132 TNRQ92752 1358 aa11.81□□□□□ -0.52
CDH6-204ENST00000508132 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
CDH6-204ENST00000508132 DDX11L8A8MPP1 907 aa11.81□□□□□ -0.52
CDH6-204ENST00000508132 MORN1Q5T089 497 aa11.81□□□□□ -0.52
CDH6-204ENST00000508132 GGT6Q6P531 493 aa11.81□□□□□ -0.52
CDH6-204ENST00000508132 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
CDH6-204ENST00000508132 TROQ12816 1431 aaPredicted RBP11.8□□□□□ -0.52
CDH6-204ENST00000508132 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
CDH6-204ENST00000508132 PRDM9Q9NQV7 894 aa11.8□□□□□ -0.52
CDH6-204ENST00000508132 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
CDH6-204ENST00000508132 SYCP2Q9BX26 1530 aa11.8□□□□□ -0.52
CDH6-204ENST00000508132 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
CDH6-204ENST00000508132 A2MP01023 1474 aa11.79□□□□□ -0.52
CDH6-204ENST00000508132 ST8SIA5O15466 376 aa11.79□□□□□ -0.52
CDH6-204ENST00000508132 DGAT1O75907 488 aa11.79□□□□□ -0.52
CDH6-204ENST00000508132 THAP11Q96EK4 314 aa11.79□□□□□ -0.52
CDH6-204ENST00000508132 DAXXQ9UER7 740 aaPredicted RBP11.79□□□□□ -0.52
CDH6-204ENST00000508132 FMN1Q68DA7 1419 aa11.78□□□□□ -0.52
CDH6-204ENST00000508132 EP400Q96L91 3159 aa11.78□□□□□ -0.52
CDH6-204ENST00000508132 ATP1B4Q9UN42 357 aaPredicted RBP11.78□□□□□ -0.52
CDH6-204ENST00000508132 PLCB2Q00722 1185 aa11.77□□□□□ -0.53
CDH6-204ENST00000508132 FOXC1Q12948 553 aa11.77□□□□□ -0.53
CDH6-204ENST00000508132 FAM160A2Q8N612 972 aaPredicted RBP11.77□□□□□ -0.53
CDH6-204ENST00000508132 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
CDH6-204ENST00000508132 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
CDH6-204ENST00000508132 COL16A1Q07092 1604 aaPredicted RBP11.77□□□□□ -0.53
CDH6-204ENST00000508132 MAP3K1Q13233 1512 aa11.76□□□□□ -0.53
CDH6-204ENST00000508132 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
CDH6-204ENST00000508132 PZPP20742 1482 aa11.76□□□□□ -0.53
CDH6-204ENST00000508132 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
CDH6-204ENST00000508132 ADGBQ8N7X0 1667 aa11.75□□□□□ -0.53
CDH6-204ENST00000508132 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
CDH6-204ENST00000508132 RGS12O14924 1447 aa11.74□□□□□ -0.53
CDH6-204ENST00000508132 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
CDH6-204ENST00000508132 FAM135AQ9P2D6 1515 aa11.74□□□□□ -0.53
CDH6-204ENST00000508132 GCGRP47871 477 aa11.73□□□□□ -0.53
CDH6-204ENST00000508132 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
CDH6-204ENST00000508132 THEMISQ8N1K5 641 aaPredicted RBP11.73□□□□□ -0.53
CDH6-204ENST00000508132 FYCO1Q9BQS8 1478 aa11.73□□□□□ -0.53
CDH6-204ENST00000508132 JCADQ9P266 1359 aa11.73□□□□□ -0.53
CDH6-204ENST00000508132 NLRP1Q9C000 1473 aa11.72□□□□□ -0.53
CDH6-204ENST00000508132 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
CDH6-204ENST00000508132 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
CDH6-204ENST00000508132 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
CDH6-204ENST00000508132 MIA2Q96PC5 1412 aa11.71□□□□□ -0.53
CDH6-204ENST00000508132 RXRBP28702 533 aa11.71□□□□□ -0.53
CDH6-204ENST00000508132 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDH6-204ENST00000508132 SMYD5Q6GMV2 418 aa11.71□□□□□ -0.53
CDH6-204ENST00000508132 AAASQ9NRG9 546 aa11.71□□□□□ -0.53
CDH6-204ENST00000508132 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
CDH6-204ENST00000508132 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
CDH6-204ENST00000508132 ZNF772Q68DY9 489 aaPredicted RBP11.7□□□□□ -0.54
CDH6-204ENST00000508132 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
CDH6-204ENST00000508132 SHPRHQ149N8 1683 aa11.69□□□□□ -0.54
CDH6-204ENST00000508132 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
CDH6-204ENST00000508132 TIAM1Q13009 1591 aa11.69□□□□□ -0.54
CDH6-204ENST00000508132 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
CDH6-204ENST00000508132 BRICD5Q6PL45 260 aa11.68□□□□□ -0.54
CDH6-204ENST00000508132 ZNF777Q9ULD5 760 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms