RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CDC42BPGQ6DT37 1551 aa16.73■□□□□ 0.27
SNCAIP-209ENST00000508017 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
SNCAIP-209ENST00000508017 PTCH1Q13635 1447 aa16.73■□□□□ 0.27
SNCAIP-209ENST00000508017 CABP1Q9NZU7 370 aa16.72■□□□□ 0.27
SNCAIP-209ENST00000508017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNCAIP-209ENST00000508017 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
SNCAIP-209ENST00000508017 ZFYVE9O95405 1425 aa16.71■□□□□ 0.27
SNCAIP-209ENST00000508017 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
SNCAIP-209ENST00000508017 CDK19Q9BWU1 502 aa16.71■□□□□ 0.27
SNCAIP-209ENST00000508017 POLKQ9UBT6 870 aa16.71■□□□□ 0.27
SNCAIP-209ENST00000508017 SKOR2Q2VWA4 1001 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-209ENST00000508017 YTHDC2Q9H6S0 1430 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-209ENST00000508017 RAPGEF3O95398 923 aa16.7■□□□□ 0.26
SNCAIP-209ENST00000508017 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
SNCAIP-209ENST00000508017 NFE2L2Q16236 605 aa16.7■□□□□ 0.26
SNCAIP-209ENST00000508017 ABCC4O15439 1325 aa16.7■□□□□ 0.26
SNCAIP-209ENST00000508017 ZNF428Q96B54 188 aa16.69■□□□□ 0.26
SNCAIP-209ENST00000508017 TRIM44Q96DX7 344 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-209ENST00000508017 MAP2P11137 1827 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-209ENST00000508017 KNDC1Q76NI1 1749 aa16.69■□□□□ 0.26
SNCAIP-209ENST00000508017 ARHGAP45Q92619 1136 aa16.69■□□□□ 0.26
SNCAIP-209ENST00000508017 MBIPQ9NS73 344 aa16.69■□□□□ 0.26
SNCAIP-209ENST00000508017 CDC45O75419 566 aa16.68■□□□□ 0.26
SNCAIP-209ENST00000508017 C8orf58Q8NAV2 365 aa16.67■□□□□ 0.26
SNCAIP-209ENST00000508017 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 PTMSP20962 102 aa16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 GNAI1P63096 354 aa16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 CHMP4BQ9H444 224 aaKnown RBP16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
SNCAIP-209ENST00000508017 DIP2CQ9Y2E4 1556 aa16.65■□□□□ 0.26
SNCAIP-209ENST00000508017 ZNF853P0CG23 659 aa16.65■□□□□ 0.26
SNCAIP-209ENST00000508017 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
SNCAIP-209ENST00000508017 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
SNCAIP-209ENST00000508017 ARHGAP31Q2M1Z3 1444 aa16.64■□□□□ 0.25
SNCAIP-209ENST00000508017 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
SNCAIP-209ENST00000508017 FAM83GA6ND36 823 aa16.64■□□□□ 0.25
SNCAIP-209ENST00000508017 SLC52A1Q9NWF4 448 aa16.64■□□□□ 0.25
SNCAIP-209ENST00000508017 NASPP49321 788 aaPredicted RBP16.63■□□□□ 0.25
SNCAIP-209ENST00000508017 CLEC17AQ6ZS10 378 aa16.63■□□□□ 0.25
SNCAIP-209ENST00000508017 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
SNCAIP-209ENST00000508017 GOLGA6L22H0YM25 854 aa16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 CALD1Q05682 793 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 ALKQ9UM73 1620 aa16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 NPM1P06748 294 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 IL13P35225 146 aa16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
SNCAIP-209ENST00000508017 PKP1Q13835 747 aa16.61■□□□□ 0.25
SNCAIP-209ENST00000508017 HSP90AA2PQ14568 343 aaPredicted RBP16.61■□□□□ 0.25
SNCAIP-209ENST00000508017 TTC22Q5TAA0 569 aa16.61■□□□□ 0.25
SNCAIP-209ENST00000508017 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
SNCAIP-209ENST00000508017 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
SNCAIP-209ENST00000508017 CCDC173Q0VFZ6 552 aa16.61■□□□□ 0.25
SNCAIP-209ENST00000508017 PPP1R9BQ96SB3 815 aa16.61■□□□□ 0.25
SNCAIP-209ENST00000508017 RABEP1Q15276 862 aa16.6■□□□□ 0.25
SNCAIP-209ENST00000508017 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-209ENST00000508017 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
SNCAIP-209ENST00000508017 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
SNCAIP-209ENST00000508017 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
SNCAIP-209ENST00000508017 NME9Q86XW9 330 aa16.59■□□□□ 0.25
SNCAIP-209ENST00000508017 USP26Q9BXU7 913 aa16.59■□□□□ 0.25
SNCAIP-209ENST00000508017 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
SNCAIP-209ENST00000508017 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.25
SNCAIP-209ENST00000508017 IBTKQ9P2D0 1353 aaPredicted RBP16.58■□□□□ 0.24
SNCAIP-209ENST00000508017 YEATS2Q9ULM3 1422 aa16.58■□□□□ 0.24
SNCAIP-209ENST00000508017 APBB1O00213 710 aa16.58■□□□□ 0.24
SNCAIP-209ENST00000508017 RRP9O43818 475 aaKnown RBP16.58■□□□□ 0.24
SNCAIP-209ENST00000508017 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
SNCAIP-209ENST00000508017 CAVIN1Q6NZI2 390 aaKnown RBP16.58■□□□□ 0.24
SNCAIP-209ENST00000508017 ATP7BP35670 1465 aa16.58■□□□□ 0.24
SNCAIP-209ENST00000508017 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
SNCAIP-209ENST00000508017 SMARCA5O60264 1052 aaPredicted RBP16.57■□□□□ 0.24
SNCAIP-209ENST00000508017 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
SNCAIP-209ENST00000508017 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
SNCAIP-209ENST00000508017 SDSP20132 328 aa16.56■□□□□ 0.24
SNCAIP-209ENST00000508017 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-209ENST00000508017 ZGPATQ8N5A5 531 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-209ENST00000508017 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-209ENST00000508017 ZNF445P59923 1031 aa16.56■□□□□ 0.24
SNCAIP-209ENST00000508017 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
SNCAIP-209ENST00000508017 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
SNCAIP-209ENST00000508017 NUCB2P80303 420 aa16.55■□□□□ 0.24
SNCAIP-209ENST00000508017 INTS3Q68E01 1043 aaKnown RBP16.55■□□□□ 0.24
SNCAIP-209ENST00000508017 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
SNCAIP-209ENST00000508017 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
SNCAIP-209ENST00000508017 RGS12O14924 1447 aa16.55■□□□□ 0.24
SNCAIP-209ENST00000508017 CEP85Q6P2H3 762 aa16.54■□□□□ 0.24
SNCAIP-209ENST00000508017 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
SNCAIP-209ENST00000508017 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SNCAIP-209ENST00000508017 RICTORQ6R327 1708 aa16.54■□□□□ 0.24
SNCAIP-209ENST00000508017 KIAA1211Q6ZU35 1233 aa16.54■□□□□ 0.24
SNCAIP-209ENST00000508017 ANP32BQ92688 251 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms