RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 TTC21BQ7Z4L5 1316 aa30.8■■■□□ 2.52
SNCB-204ENST00000508006 PHRF1Q9P1Y6 1649 aaKnown RBP30.79■■■□□ 2.52
SNCB-204ENST00000508006 DISP2A7MBM2 1401 aa30.79■■■□□ 2.52
SNCB-204ENST00000508006 PIK3C2AO00443 1686 aa30.78■■■□□ 2.52
SNCB-204ENST00000508006 USP54Q70EL1 1684 aa30.78■■■□□ 2.52
SNCB-204ENST00000508006 BARGINQ6ZT62 677 aa30.77■■■□□ 2.52
SNCB-204ENST00000508006 CAMKK2Q96RR4 588 aa30.77■■■□□ 2.52
SNCB-204ENST00000508006 NLRP13Q86W25 1043 aa30.75■■■□□ 2.51
SNCB-204ENST00000508006 PANK3Q9H999 370 aa30.75■■■□□ 2.51
SNCB-204ENST00000508006 TNS1Q9HBL0 1735 aaKnown RBP30.75■■■□□ 2.51
SNCB-204ENST00000508006 LARP1Q6PKG0 1096 aaKnown RBP30.74■■■□□ 2.51
SNCB-204ENST00000508006 TCP11L2Q8N4U5 519 aa30.74■■■□□ 2.51
SNCB-204ENST00000508006 KIF20BQ96Q89 1820 aa30.73■■■□□ 2.51
SNCB-204ENST00000508006 CARD14Q9BXL6 1004 aa30.73■■■□□ 2.51
SNCB-204ENST00000508006 ZNF316A6NFI3 1004 aaPredicted RBP30.72■■■□□ 2.51
SNCB-204ENST00000508006 NSD3Q9BZ95 1437 aa30.72■■■□□ 2.51
SNCB-204ENST00000508006 USP31Q70CQ4 1352 aa30.71■■■□□ 2.51
SNCB-204ENST00000508006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.7■■■□□ 2.51
SNCB-204ENST00000508006 PARD3Q8TEW0 1356 aa30.69■■■□□ 2.5
SNCB-204ENST00000508006 ZBTB7CA1YPR0 619 aa30.69■■■□□ 2.5
SNCB-204ENST00000508006 GCP02774 474 aa30.69■■■□□ 2.5
SNCB-204ENST00000508006 NBPF14Q5TI25 921 aa30.69■■■□□ 2.5
SNCB-204ENST00000508006 THRAP3Q9Y2W1 955 aaKnown RBP30.69■■■□□ 2.5
SNCB-204ENST00000508006 CAMTA1Q9Y6Y1 1673 aa30.68■■■□□ 2.5
SNCB-204ENST00000508006 CGNL1Q0VF96 1302 aa30.68■■■□□ 2.5
SNCB-204ENST00000508006 CPDO75976 1380 aa30.67■■■□□ 2.5
SNCB-204ENST00000508006 NLRP6P59044 892 aa30.67■■■□□ 2.5
SNCB-204ENST00000508006 USP19O94966 1318 aa30.66■■■□□ 2.5
SNCB-204ENST00000508006 KNSTRNQ9Y448 316 aa30.65■■■□□ 2.5
SNCB-204ENST00000508006 ANKRD26Q9UPS8 1709 aa30.64■■■□□ 2.5
SNCB-204ENST00000508006 SLIT3O75094 1523 aa30.64■■■□□ 2.5
SNCB-204ENST00000508006 FYB1O15117 783 aa30.63■■■□□ 2.49
SNCB-204ENST00000508006 PER1O15534 1290 aaPredicted RBP30.63■■■□□ 2.49
SNCB-204ENST00000508006 NME9Q86XW9 330 aa30.63■■■□□ 2.49
SNCB-204ENST00000508006 NSD2O96028 1365 aa30.63■■■□□ 2.49
SNCB-204ENST00000508006 OVOS2A0A0J9YW53 1432 aa30.63■■■□□ 2.49
SNCB-204ENST00000508006 OVOS2Q6IE36 1432 aa30.63■■■□□ 2.49
SNCB-204ENST00000508006 KCNH5Q8NCM2 988 aa30.59■■■□□ 2.49
SNCB-204ENST00000508006 COG3Q96JB2 828 aa30.59■■■□□ 2.49
SNCB-204ENST00000508006 LMO7Q8WWI1 1683 aa30.58■■■□□ 2.49
SNCB-204ENST00000508006 NPC1L1Q9UHC9 1359 aa30.57■■■□□ 2.48
SNCB-204ENST00000508006 TOM1L2Q6ZVM7 507 aa30.55■■■□□ 2.48
SNCB-204ENST00000508006 COL5A2P05997 1499 aaPredicted RBP30.55■■■□□ 2.48
SNCB-204ENST00000508006 CRB1P82279 1406 aa30.55■■■□□ 2.48
SNCB-204ENST00000508006 GGNBP2Q9H3C7 697 aa30.54■■■□□ 2.48
SNCB-204ENST00000508006 AMER1Q5JTC6 1135 aaPredicted RBP30.53■■■□□ 2.48
SNCB-204ENST00000508006 PPP1R1BQ9UD71 204 aaPredicted RBP30.53■■■□□ 2.48
SNCB-204ENST00000508006 NFAT5O94916 1531 aa30.52■■■□□ 2.48
SNCB-204ENST00000508006 DDX10Q13206 875 aaKnown RBP30.52■■■□□ 2.48
SNCB-204ENST00000508006 DDB1Q16531 1140 aa30.52■■■□□ 2.48
SNCB-204ENST00000508006 RREB1Q92766 1687 aa30.52■■■□□ 2.48
SNCB-204ENST00000508006 AATKQ6ZMQ8 1374 aa30.51■■■□□ 2.47
SNCB-204ENST00000508006 SPON1Q9HCB6 807 aa30.5■■■□□ 2.47
SNCB-204ENST00000508006 NUP188Q5SRE5 1749 aa30.5■■■□□ 2.47
SNCB-204ENST00000508006 PARP4Q9UKK3 1724 aaKnown RBP30.5■■■□□ 2.47
SNCB-204ENST00000508006 OVOS2A0A0G2JMS6 1433 aa30.48■■■□□ 2.47
SNCB-204ENST00000508006 LTN1O94822 1766 aa30.47■■■□□ 2.47
SNCB-204ENST00000508006 DCAF8L1A6NGE4 600 aa30.47■■■□□ 2.47
SNCB-204ENST00000508006 ABCC6O95255 1503 aa30.47■■■□□ 2.47
SNCB-204ENST00000508006 KCNQ2O43526 872 aa30.46■■■□□ 2.47
SNCB-204ENST00000508006 PLSCR1O15162 318 aa30.44■■■□□ 2.46
SNCB-204ENST00000508006 SOX12O15370 315 aa30.43■■■□□ 2.46
SNCB-204ENST00000508006 CSB-PGBD3P0DP91 1061 aa30.43■■■□□ 2.46
SNCB-204ENST00000508006 AXIN2Q9Y2T1 843 aa30.43■■■□□ 2.46
SNCB-204ENST00000508006 ARHGEF25Q86VW2 580 aa30.42■■■□□ 2.46
SNCB-204ENST00000508006 CDCA7Q9BWT1 371 aaPredicted RBP30.42■■■□□ 2.46
SNCB-204ENST00000508006 BCL11BQ9C0K0 894 aaPredicted RBP30.42■■■□□ 2.46
SNCB-204ENST00000508006 WDR17Q8IZU2 1322 aa30.42■■■□□ 2.46
SNCB-204ENST00000508006 MORC1Q86VD1 984 aa30.41■■■□□ 2.46
SNCB-204ENST00000508006 YY1P25490 414 aa30.4■■■□□ 2.46
SNCB-204ENST00000508006 COL18A1P39060 1754 aa30.4■■■□□ 2.46
SNCB-204ENST00000508006 MAP2P11137 1827 aaKnown RBP30.4■■■□□ 2.46
SNCB-204ENST00000508006 KIF24Q5T7B8 1368 aa30.39■■■□□ 2.45
SNCB-204ENST00000508006 CC2D1BQ5T0F9 858 aaKnown RBP30.37■■■□□ 2.45
SNCB-204ENST00000508006 SBF2Q86WG5 1849 aa30.36■■■□□ 2.45
SNCB-204ENST00000508006 MARCH10Q8NA82 808 aaPredicted RBP30.36■■■□□ 2.45
SNCB-204ENST00000508006 EXOC5O00471 708 aa30.35■■■□□ 2.45
SNCB-204ENST00000508006 RTL1A6NKG5 1358 aa30.35■■■□□ 2.45
SNCB-204ENST00000508006 LRRC37A3O60309 1634 aa30.35■■■□□ 2.45
SNCB-204ENST00000508006 PEAK1Q9H792 1746 aa30.35■■■□□ 2.45
SNCB-204ENST00000508006 PTF1AQ7RTS3 328 aa30.34■■■□□ 2.45
SNCB-204ENST00000508006 CARD10Q9BWT7 1032 aa30.34■■■□□ 2.45
SNCB-204ENST00000508006 MAP3K19Q56UN5 1328 aa30.32■■■□□ 2.44
SNCB-204ENST00000508006 RGPD5Q99666 1765 aa30.31■■■□□ 2.44
SNCB-204ENST00000508006 ANO8Q9HCE9 1232 aaPredicted RBP30.3■■■□□ 2.44
SNCB-204ENST00000508006 RGPD3A6NKT7 1758 aaPredicted RBP30.3■■■□□ 2.44
SNCB-204ENST00000508006 RGPD4Q7Z3J3 1758 aa30.3■■■□□ 2.44
SNCB-204ENST00000508006 SMG6Q86US8 1419 aaKnown RBP30.3■■■□□ 2.44
SNCB-204ENST00000508006 IP6K1Q92551 441 aa30.29■■■□□ 2.44
SNCB-204ENST00000508006 AMPHP49418 695 aa30.28■■■□□ 2.44
SNCB-204ENST00000508006 RRS1Q15050 365 aaKnown RBP30.28■■■□□ 2.44
SNCB-204ENST00000508006 PROM2Q8N271 834 aa30.28■■■□□ 2.44
SNCB-204ENST00000508006 FLT4P35916 1363 aa30.28■■■□□ 2.44
SNCB-204ENST00000508006 FBLN1P23142 703 aa30.27■■■□□ 2.44
SNCB-204ENST00000508006 TNNT2P45379 298 aaPredicted RBP30.27■■■□□ 2.44
SNCB-204ENST00000508006 STK32BQ9NY57 414 aa30.27■■■□□ 2.44
SNCB-204ENST00000508006 POLKQ9UBT6 870 aa30.27■■■□□ 2.44
SNCB-204ENST00000508006 RALBP1Q15311 655 aa30.26■■■□□ 2.43
SNCB-204ENST00000508006 WNK3Q9BYP7 1800 aa30.25■■■□□ 2.43
SNCB-204ENST00000508006 ZBTB7AO95365 584 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms