RNA–Protein interactions for RNA: ENST00000507993.5

TTC39B-207, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-207ENST00000507993 ARHGAP5Q13017 1502 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 MAGI2Q86UL8 1455 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 TROQ12816 1431 aaPredicted RBP8.37□□□□□ -1.07
TTC39B-207ENST00000507993 FMN1Q68DA7 1419 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 TRAPPC8Q9Y2L5 1435 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 MYO5CQ9NQX4 1742 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 SOX12O15370 315 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 MARCH6O60337 910 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 PTMAP06454 111 aaKnown RBP8.37□□□□□ -1.07
TTC39B-207ENST00000507993 PTMSP20962 102 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 SETQ01105 290 aaPredicted RBP8.37□□□□□ -1.07
TTC39B-207ENST00000507993 GIMAP6Q6P9H5 292 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 UBXN4Q92575 508 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 BEGAINQ9BUH8 593 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 BCL2L13Q9BXK5 485 aa8.37□□□□□ -1.07
TTC39B-207ENST00000507993 ZC3H4Q9UPT8 1303 aaKnown RBP8.36□□□□□ -1.07
TTC39B-207ENST00000507993 NOM1Q5C9Z4 860 aaKnown RBP8.36□□□□□ -1.07
TTC39B-207ENST00000507993 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 STAC3Q96MF2 364 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 PRDM16Q9HAZ2 1276 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 TBC1D2BQ9UPU7 963 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 C9orf84Q5VXU9 1444 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 TIAM1Q13009 1591 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
TTC39B-207ENST00000507993 L1TD1Q5T7N2 865 aaKnown RBP8.35□□□□□ -1.07
TTC39B-207ENST00000507993 PRDM10Q9NQV6 1147 aa8.35□□□□□ -1.07
TTC39B-207ENST00000507993 TONSLQ96HA7 1378 aa8.35□□□□□ -1.07
TTC39B-207ENST00000507993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
TTC39B-207ENST00000507993 FCHSD2O94868 740 aa8.35□□□□□ -1.07
TTC39B-207ENST00000507993 SSTR3P32745 418 aaPredicted RBP8.35□□□□□ -1.07
TTC39B-207ENST00000507993 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
TTC39B-207ENST00000507993 PRKRIP1Q9H875 184 aaPredicted RBP8.35□□□□□ -1.07
TTC39B-207ENST00000507993 GOLGA2Q08379 1002 aa8.34□□□□□ -1.07
TTC39B-207ENST00000507993 CDCA8Q53HL2 280 aa8.34□□□□□ -1.07
TTC39B-207ENST00000507993 DPY19L2Q6NUT2 758 aa8.34□□□□□ -1.07
TTC39B-207ENST00000507993 TMUB1Q9BVT8 246 aa8.34□□□□□ -1.07
TTC39B-207ENST00000507993 PNNQ9H307 717 aaKnown RBP8.34□□□□□ -1.07
TTC39B-207ENST00000507993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.34□□□□□ -1.073e-6■■□□□ 14
TTC39B-207ENST00000507993 PRDM4Q9UKN5 801 aa8.34□□□□□ -1.07
TTC39B-207ENST00000507993 DIP2CQ9Y2E4 1556 aa8.34□□□□□ -1.07
TTC39B-207ENST00000507993 ABCA6Q8N139 1617 aa8.34□□□□□ -1.07
TTC39B-207ENST00000507993 HNRNPMP52272 730 aaKnown RBP eCLIP8.33□□□□□ -1.082e-6■■■■□ 25
TTC39B-207ENST00000507993 ZC3H6P61129 1189 aaKnown RBP8.33□□□□□ -1.08
TTC39B-207ENST00000507993 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
TTC39B-207ENST00000507993 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
TTC39B-207ENST00000507993 PDCL3Q9H2J4 239 aa8.33□□□□□ -1.08
TTC39B-207ENST00000507993 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
TTC39B-207ENST00000507993 ZNF518AQ6AHZ1 1483 aa8.33□□□□□ -1.08
TTC39B-207ENST00000507993 KDM5CP41229 1560 aa8.33□□□□□ -1.08
TTC39B-207ENST00000507993 MS4A4AQ96JQ5 239 aa8.33□□□□□ -1.08
TTC39B-207ENST00000507993 NCOA1Q15788 1441 aa8.32□□□□□ -1.08
TTC39B-207ENST00000507993 CCDC184Q52MB2 194 aa8.32□□□□□ -1.08
TTC39B-207ENST00000507993 PPP1R12CQ9BZL4 782 aa8.32□□□□□ -1.08
TTC39B-207ENST00000507993 TPM2P07951 284 aa8.31□□□□□ -1.08
TTC39B-207ENST00000507993 NAALADL2Q58DX5 795 aa8.31□□□□□ -1.08
TTC39B-207ENST00000507993 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
TTC39B-207ENST00000507993 KCNG1Q9UIX4 513 aa8.31□□□□□ -1.08
TTC39B-207ENST00000507993 LMOD1P29536 600 aaPredicted RBP8.31□□□□□ -1.08
TTC39B-207ENST00000507993 CLK2P49760 499 aaKnown RBP8.31□□□□□ -1.08
TTC39B-207ENST00000507993 MRS2Q9HD23 443 aa8.31□□□□□ -1.08
TTC39B-207ENST00000507993 GPCPD1Q9NPB8 672 aa8.31□□□□□ -1.08
TTC39B-207ENST00000507993 CASKIN1Q8WXD9 1431 aa8.31□□□□□ -1.08
TTC39B-207ENST00000507993 C3P01024 1663 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 LOC102724159A0A0B4J2E5 919 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 CLGNO14967 610 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 OSBPP22059 807 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 PWP2Q15269 919 aaKnown RBP8.3□□□□□ -1.08
TTC39B-207ENST00000507993 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 ABCC1P33527 1531 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 KIDINS220Q9ULH0 1771 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 ZNF644Q9H582 1327 aaPredicted RBP8.3□□□□□ -1.08
TTC39B-207ENST00000507993 MLH3Q9UHC1 1453 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 PREX2Q70Z35 1606 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 ERCC3P19447 782 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 TMEM259Q4ZIN3 620 aa8.3□□□□□ -1.08
TTC39B-207ENST00000507993 UHRF1BP1Q6BDS2 1440 aa8.29□□□□□ -1.08
TTC39B-207ENST00000507993 CDC42BPAQ5VT25 1732 aa8.29□□□□□ -1.08
TTC39B-207ENST00000507993 RIPOR2Q9Y4F9 1068 aa8.29□□□□□ -1.08
TTC39B-207ENST00000507993 LRRC9Q6ZRR7 1453 aa8.29□□□□□ -1.08
TTC39B-207ENST00000507993 ITSN2Q9NZM3 1697 aa8.29□□□□□ -1.08
TTC39B-207ENST00000507993 CCDC7Q96M83 1385 aa8.28□□□□□ -1.08
TTC39B-207ENST00000507993 SAMD9LQ8IVG5 1584 aa8.28□□□□□ -1.08
TTC39B-207ENST00000507993 PALM3A6NDB9 673 aaPredicted RBP8.28□□□□□ -1.08
TTC39B-207ENST00000507993 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
TTC39B-207ENST00000507993 FAM9BQ8IZU0 186 aa8.28□□□□□ -1.08
TTC39B-207ENST00000507993 PHOX2BQ99453 314 aa8.28□□□□□ -1.08
TTC39B-207ENST00000507993 GPATCH8Q9UKJ3 1502 aaKnown RBP8.28□□□□□ -1.08
TTC39B-207ENST00000507993 MICAL1Q8TDZ2 1067 aa8.28□□□□□ -1.08
TTC39B-207ENST00000507993 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
TTC39B-207ENST00000507993 SYCP2Q9BX26 1530 aa8.27□□□□□ -1.08
TTC39B-207ENST00000507993 VIRMAQ69YN4 1812 aaKnown RBP8.27□□□□□ -1.09
TTC39B-207ENST00000507993 FAM193AP78312 1265 aa8.27□□□□□ -1.09
TTC39B-207ENST00000507993 SF3A1Q15459 793 aaKnown RBP8.27□□□□□ -1.09
TTC39B-207ENST00000507993 DPH6Q7L8W6 267 aa8.27□□□□□ -1.09
TTC39B-207ENST00000507993 FSD2A1L4K1 749 aa8.26□□□□□ -1.09
TTC39B-207ENST00000507993 MMP14P50281 582 aa8.26□□□□□ -1.09
TTC39B-207ENST00000507993 FOSBP53539 338 aa8.26□□□□□ -1.09
TTC39B-207ENST00000507993 RRP1P56182 461 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms